Miyakogusa Predicted Gene
- Lj0g3v0001899.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0001899.1 Non Chatacterized Hit- tr|D0A173|D0A173_TRYB9
Thymidine kinase, putative OS=Trypanosoma brucei
gambi,35.48,1e-17,P-loop containing nucleoside triphosphate
hydrolases,NULL; seg,NULL; TK,Thymidine kinase; THYMIDINE ,CUFF.123.1
(504 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BI419719 similar to UniRef100_A7Q347 Cluster: Thymidine... 997 0.0
gnl|LJGI|TC61717 similar to UniRef100_A7Q347 Cluster: Thymidine ... 807 0.0
gnl|LJGI|TC62311 similar to UniRef100_A7Q347 Cluster: Thymidine ... 62 4e-09
>gnl|LJGI|BI419719 similar to UniRef100_A7Q347 Cluster: Thymidine kinase; n=1; Vitis
vinifera|Rep: Thymidine kinase - Vitis vinifera (Grape),
partial (66%)
Length = 507
Score = 997 bits (503), Expect = 0.0
Identities = 503/503 (100%)
Strand = Plus / Plus
Query: 1 atggcttcttcctcctccaccttatctcactcctctggcgagatccatcttttcgtcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atggcttcttcctcctccaccttatctcactcctctggcgagatccatcttttcgtcggt 64
Query: 61 cccatgttcgccggtaaaaccacttcccttctccgtcgcatcaagtctgaggttgacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cccatgttcgccggtaaaaccacttcccttctccgtcgcatcaagtctgaggttgacact 124
Query: 121 ggcaggaatgtggtcatgttaaaatcaagcaaggatacaaggtatgcaattgactctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggcaggaatgtggtcatgttaaaatcaagcaaggatacaaggtatgcaattgactctgtt 184
Query: 181 gtatctcatgatggtgtcaagtttccttgctgggcattgccagatcttatgtctttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtatctcatgatggtgtcaagtttccttgctgggcattgccagatcttatgtctttcaaa 244
Query: 241 gaaaagtatggtcatgaggcttatcaaaagttggatgtgattggtatagacgaggctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaaaagtatggtcatgaggcttatcaaaagttggatgtgattggtatagacgaggctcag 304
Query: 301 tttttcgaggatctatatgatttttgctgcaaggctgctgatgttgatggtaaaattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tttttcgaggatctatatgatttttgctgcaaggctgctgatgttgatggtaaaattgtt 364
Query: 361 gttgtagcaggcctagatggtgattacttgaggagaagctttggctcagtgcttcacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gttgtagcaggcctagatggtgattacttgaggagaagctttggctcagtgcttcacata 424
Query: 421 ataccacttgctgatacagtgaccaagttaacagctcgttgtgaactatgtgggaaacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ataccacttgctgatacagtgaccaagttaacagctcgttgtgaactatgtgggaaacgt 484
Query: 481 gctttctttactttgaggaaaaa 503
|||||||||||||||||||||||
Sbjct: 485 gctttctttactttgaggaaaaa 507
>gnl|LJGI|TC61717 similar to UniRef100_A7Q347 Cluster: Thymidine kinase; n=1; Vitis
vinifera|Rep: Thymidine kinase - Vitis vinifera (Grape),
partial (76%)
Length = 810
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 94 cgtcgcatcaagtctgaggttgacactggcaggaatgtggtcatgttaaaatcaagcaag 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgtcgcatcaagtctgaggttgacactggcaggaatgtggtcatgttaaaatcaagcaag 61
Query: 154 gatacaaggtatgcaattgactctgttgtatctcatgatggtgtcaagtttccttgctgg 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatacaaggtatgcaattgactctgttgtatctcatgatggtgtcaagtttccttgctgg 121
Query: 214 gcattgccagatcttatgtctttcaaagaaaagtatggtcatgaggcttatcaaaagttg 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcattgccagatcttatgtctttcaaagaaaagtatggtcatgaggcttatcaaaagttg 181
Query: 274 gatgtgattggtatagacgaggctcagtttttcgaggatctatatgatttttgctgcaag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatgtgattggtatagacgaggctcagtttttcgaggatctatatgatttttgctgcaag 241
Query: 334 gctgctgatgttgatggtaaaattgttgttgtagcaggcctagatggtgattacttgagg 393
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 242 gctgctgatgttgatggtaaaattgttgttgtggcaggcctagatggtgattacttgagg 301
Query: 394 agaagctttggctcagtgcttcacataataccacttgctgatacagtgaccaagttaaca 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaagctttggctcagtgcttcacataataccacttgctgatacagtgaccaagttaaca 361
Query: 454 gctcgttgtgaactatgtgggaaacgtgctttctttactttgaggaaaaag 504
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gctcgttgtgaactatgtgggaaacgtgctttctttactttgaggaaaaag 412
>gnl|LJGI|TC62311 similar to UniRef100_A7Q347 Cluster: Thymidine kinase; n=1; Vitis
vinifera|Rep: Thymidine kinase - Vitis vinifera (Grape),
partial (84%)
Length = 1279
Score = 61.9 bits (31), Expect = 4e-09
Identities = 181/231 (78%)
Strand = Plus / Plus
Query: 272 tggatgtgattggtatagacgaggctcagtttttcgaggatctatatgatttttgctgca 331
|||||||||||||||| || || ||||| || || || || || ||||| || ||| |
Sbjct: 579 tggatgtgattggtattgatgaagctcaattctttgatgacctttatgacttctgccgtg 638
Query: 332 aggctgctgatgttgatggtaaaattgttgttgtagcaggcctagatggtgattacttga 391
| ||||||||| |||||| |||| || || || ||||| ||||||||| | || ||||
Sbjct: 639 aagctgctgatcatgatggaaaaacagtagtagttgcaggactagatggtaactatttga 698
Query: 392 ggagaagctttggctcagtgcttcacataataccacttgctgatacagtgaccaagttaa 451
|||| | |||||| ||||| ||| | || || || ||||||||| | || |||||| |||
Sbjct: 699 ggaggaactttggttcagtccttgatatcattccccttgctgattctgtaaccaagctaa 758
Query: 452 cagctcgttgtgaactatgtgggaaacgtgctttctttactttgaggaaaa 502
| || || || ||| | |||||||| | |||||||||||| |||||||||
Sbjct: 759 ctgcccgatgcgaaatctgtgggaagcatgctttctttaccctgaggaaaa 809