Miyakogusa Predicted Gene

Lj0g3v0000089.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0000089.2 tr|G7JDV1|G7JDV1_MEDTR RING finger protein
OS=Medicago truncatula GN=MTR_4g080750 PE=4
SV=1,68.75,0.00000000000008, ,CUFF.43.2
         (195 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65317                                                      248   1e-65

>gnl|LJGI|TC65317 
          Length = 654

 Score =  248 bits (125), Expect = 1e-65
 Identities = 178/195 (91%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcaatttcacgccattgccagggcgttggaggagaggtgttagagcctatgacgct 60
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 86  atgagcaatttcacgcctttgccagggcgttggaggagaggtgttagagcctatgatgct 145

                                                                       
Query: 61  cacaccaccaacaatagtgaatccaatgaagtgcctgtgttttacagatctcactctaca 120
           ||||| |||||||  ||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 146 cacacaaccaacaccagtgaatccaatgaagtgcctgtgtattatagatctcactctaca 205

                                                                       
Query: 121 agggtta---atgatgagaggagttcaggtgtatctgatccactgcagtggtgggaagtc 177
           ||||| |   | |||||||||||||||||||||   |||| |||||||||||||||||||
Sbjct: 206 agggtcaaccaggatgagaggagttcaggtgtactagatctactgcagtggtgggaagtc 265

                          
Query: 178 agaactccaacaaga 192
           |||||||| ||||||
Sbjct: 266 agaactcctacaaga 280