SLC12A9 ORF clone FHC14988

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC14988

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Clone info.

Species

human

Clone Name

pFN21AE6482 Sequence (with vector) Restriction Map

Product ID

FHC14988

ORF Sequence

DNA sequence (1614 bp)
Protein sequence (538 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE6482

Symbol

SLC12A9

Alias : CCC6, CIP1, WO3.3, hCCC6

Description

solute carrier family 12, member 9, transcript variant 3

Original Clone ID

oc96482

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1614 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 538 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59069.1 0 100.0 SLC12A9 CCDS59068.1 1.5e-199 93.9 SLC12A9 CCDS5707.1 1.5e-198 94.3 SLC12A9 CCDS13391.1 3.6e-34 31.3 SLC12A5 CCDS46610.1 3.7e-34 31.3 SLC12A5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004841 71 446 PF00324 Amino acid permease domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 39 TFLGVVVPTVLSMFSIVVFLRI 60 PRIMARY 22 2 78 NLLYGSLLLGLVGGVCTLGAGLY 100 PRIMARY 23 3 105 FLTFLLVSGSLASVLISFVAVGP 127 PRIMARY 23 4 171 TTGAVMNFASVFAVLFNGCTGIM 193 SECONDARY 23 5 211 LGTIVAVAYTFFVYVLLFFLSSF 233 PRIMARY 23 6 252 LWPPLVLIGIYATALSASMSSLI 274 SECONDARY 23 7 303 GNPWAAVLYSWGLVQLVLLAGKL 325 SECONDARY 23 8 331 VVTVFYLVAYAAVDLSCLSLEWA 353 PRIMARY 23 9 376 SCLLMMFLISPGAAGGSLLLMGL 398 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001254743 538 616861 100.0 100.0 XP_005250559 825 616861 100.0 98.5 XP_006716117 825 616861 100.0 98.5 NP_001254741 631 616861 93.9 94.2 NP_064631 914 616861 94.3 93.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE6482 Download

>KIEE6482  1614 bp
ATGGCCAGCGAGAGCTCACCTCTGCTGGCCTACCGGCTCCTGGGGGAGGAGGGGGTTGCC
CTCCCTGCCAATGGGGCCGGGGGTCCTGGAGGGGCGTCTGCCCGGAAGCTGTCCACCTTC
CTGGGTGTGGTGGTGCCCACTGTCCTGTCCATGTTCAGCATAGTTGTTTTTCTGAGGATT
GATGCCACAGGGCCCAGTGGGCTCCGGGTCCTGCCCCAGGGCTACGGCTGGAACCTGCTG
TATGGCTCCCTGCTGCTGGGCCTTGTGGGTGGGGTCTGCACCCTGGGAGCCGGCCTCTAT
GCCCGGGCCTCATTCCTCACATTCCTGCTGGTCTCTGGCTCCCTGGCCTCTGTGCTCATC
AGTTTTGTGGCTGTGGGGCCGAGGGACATCCGCTTGACTCCTAGGCCTGGCCCCAATGGC
TCCTCCCTGCCGCCCCGGTTTGGCCACTTCACCGGCTTCAACAGCAGTACCCTGAAGGAC
AACTTGGGCGCTGGCTATGCTGAGGACTACACCACGGGAGCCGTGATGAATTTTGCCAGC
GTCTTTGCTGTCCTCTTTAACGGCTGTACAGGCATCATGGCTGGGGCCAACATGTCAGGG
GAGCTGAAGGACCCCAGCCGGGCGATCCCTCTGGGCACGATCGTCGCCGTCGCCTACACC
TTCTTCGTCTATGTCCTGCTTTTCTTTCTCTCCAGCTTCACTTGTGACAGGACCCTGCTG
CAGGAAGACTATGGGTTCTTCCGCGCCATCAGCCTGTGGCCCCCACTGGTGTTGATCGGA
ATCTATGCCACAGCGCTCTCAGCGTCCATGAGCTCGCTCATTGGTGCCTCCCGCATCCTC
CATGCCCTGGCCCGGGATGACCTCTTTGGCGTGATCTTGGCACCGGCCAAGGTTGTGTCC
CGAGGGGGAAACCCCTGGGCAGCTGTACTTTATTCTTGGGGCCTGGTGCAGCTGGTGCTC
CTGGCTGGGAAGCTGAACACACTGGCCGCTGTGGTCACTGTCTTCTACCTGGTGGCCTAT
GCTGCCGTGGACCTGTCCTGCCTGAGCCTGGAGTGGGCCTCGGCCCCCAACTTCCGCCCC
ACCTTCAGCCTGTTCTCCTGGCACACCTGCCTGCTGGGGGTGGCCTCCTGCCTGCTCATG
ATGTTCCTCATCAGTCCTGGCGCGGCTGGTGGCTCCCTGCTCCTCATGGGTCTGCTGGCT
GCCCTGCTCACCGCGCGAGGAGGCCCCAGTAGCTGGGGCTATGTCAGCCAGGCCTTGCTT
TTCCACCAGGTGCGTAAGTATCTGCTTCGGCTGGACGTCCGGAAGGATCACGTGAAGTTC
TGGCGGCCCCAGCTGCTGCTCCTGGTGGGGAACCCCCGGGGCGCCCTGCCTCTGCTGCGG
TTGGCCAACCAGCTTAAGAAGGGGGGGCTGTATGTGCTGGGCCACGTCACCCTGGGAGAC
CTCGACTCCCTGCCCTCGGACCCTGTACAGCCGCAGTATGGGGCATGGCTCAGCCTGGTG
GACCGTGCCCAGGTGAAGGCTTTTGTGGATCTAACCCTCTCACCCTCCGTGCGCCAGGGG
GCTCAGCATCTGCTGCGAATCTCCGGCCTCGAGTCAAACTCGCATCCCCTGCCG

ORF Protein

Cloned ORF protein sequence for pFN21AE6482 Download

>KIEE6482  538 aa
MASESSPLLAYRLLGEEGVALPANGAGGPGGASARKLSTFLGVVVPTVLSMFSIVVFLRI
DATGPSGLRVLPQGYGWNLLYGSLLLGLVGGVCTLGAGLYARASFLTFLLVSGSLASVLI
SFVAVGPRDIRLTPRPGPNGSSLPPRFGHFTGFNSSTLKDNLGAGYAEDYTTGAVMNFAS
VFAVLFNGCTGIMAGANMSGELKDPSRAIPLGTIVAVAYTFFVYVLLFFLSSFTCDRTLL
QEDYGFFRAISLWPPLVLIGIYATALSASMSSLIGASRILHALARDDLFGVILAPAKVVS
RGGNPWAAVLYSWGLVQLVLLAGKLNTLAAVVTVFYLVAYAAVDLSCLSLEWASAPNFRP
TFSLFSWHTCLLGVASCLLMMFLISPGAAGGSLLLMGLLAALLTARGGPSSWGYVSQALL
FHQVRKYLLRLDVRKDHVKFWRPQLLLLVGNPRGALPLLRLANQLKKGGLYVLGHVTLGD
LDSLPSDPVQPQYGAWLSLVDRAQVKAFVDLTLSPSVRQGAQHLLRISGLESNSHPLP

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE6482 Download

>pFN21AE6482  6319 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCAGCGAGAGCTCACCTCTGCTGGCCTACCG
GCTCCTGGGGGAGGAGGGGGTTGCCCTCCCTGCCAATGGGGCCGGGGGTCCTGGAGGGGC
GTCTGCCCGGAAGCTGTCCACCTTCCTGGGTGTGGTGGTGCCCACTGTCCTGTCCATGTT
CAGCATAGTTGTTTTTCTGAGGATTGATGCCACAGGGCCCAGTGGGCTCCGGGTCCTGCC
CCAGGGCTACGGCTGGAACCTGCTGTATGGCTCCCTGCTGCTGGGCCTTGTGGGTGGGGT
CTGCACCCTGGGAGCCGGCCTCTATGCCCGGGCCTCATTCCTCACATTCCTGCTGGTCTC
TGGCTCCCTGGCCTCTGTGCTCATCAGTTTTGTGGCTGTGGGGCCGAGGGACATCCGCTT
GACTCCTAGGCCTGGCCCCAATGGCTCCTCCCTGCCGCCCCGGTTTGGCCACTTCACCGG
CTTCAACAGCAGTACCCTGAAGGACAACTTGGGCGCTGGCTATGCTGAGGACTACACCAC
GGGAGCCGTGATGAATTTTGCCAGCGTCTTTGCTGTCCTCTTTAACGGCTGTACAGGCAT
CATGGCTGGGGCCAACATGTCAGGGGAGCTGAAGGACCCCAGCCGGGCGATCCCTCTGGG
CACGATCGTCGCCGTCGCCTACACCTTCTTCGTCTATGTCCTGCTTTTCTTTCTCTCCAG
CTTCACTTGTGACAGGACCCTGCTGCAGGAAGACTATGGGTTCTTCCGCGCCATCAGCCT
GTGGCCCCCACTGGTGTTGATCGGAATCTATGCCACAGCGCTCTCAGCGTCCATGAGCTC
GCTCATTGGTGCCTCCCGCATCCTCCATGCCCTGGCCCGGGATGACCTCTTTGGCGTGAT
CTTGGCACCGGCCAAGGTTGTGTCCCGAGGGGGAAACCCCTGGGCAGCTGTACTTTATTC
TTGGGGCCTGGTGCAGCTGGTGCTCCTGGCTGGGAAGCTGAACACACTGGCCGCTGTGGT
CACTGTCTTCTACCTGGTGGCCTATGCTGCCGTGGACCTGTCCTGCCTGAGCCTGGAGTG
GGCCTCGGCCCCCAACTTCCGCCCCACCTTCAGCCTGTTCTCCTGGCACACCTGCCTGCT
GGGGGTGGCCTCCTGCCTGCTCATGATGTTCCTCATCAGTCCTGGCGCGGCTGGTGGCTC
CCTGCTCCTCATGGGTCTGCTGGCTGCCCTGCTCACCGCGCGAGGAGGCCCCAGTAGCTG
GGGCTATGTCAGCCAGGCCTTGCTTTTCCACCAGGTGCGTAAGTATCTGCTTCGGCTGGA
CGTCCGGAAGGATCACGTGAAGTTCTGGCGGCCCCAGCTGCTGCTCCTGGTGGGGAACCC
CCGGGGCGCCCTGCCTCTGCTGCGGTTGGCCAACCAGCTTAAGAAGGGGGGGCTGTATGT
GCTGGGCCACGTCACCCTGGGAGACCTCGACTCCCTGCCCTCGGACCCTGTACAGCCGCA
GTATGGGGCATGGCTCAGCCTGGTGGACCGTGCCCAGGTGAAGGCTTTTGTGGATCTAAC
CCTCTCACCCTCCGTGCGCCAGGGGGCTCAGCATCTGCTGCGAATCTCCGGCCTCGAGTC
AAACTCGCATCCCCTGCCGGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGA
GTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGT
TGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCA
GACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAA
TGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAAT
AAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGG
GAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATC
CTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGT
CAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACT
TTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGT
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCT
GTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCA
CGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
GAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCC
CGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTG
GTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTA
TGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATC
GGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTT
GATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATG
CCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGC
TCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCT
CGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTAC
ACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCC
TCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAG
CTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACA
TGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGC
GAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCT
CTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCG
TGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCA
AGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT
ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTA
ACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTA
ACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCT
TCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTT
TTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGA
TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCA
TGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGC
ACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATT
AAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTT
ATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGC
CGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCAC
TTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCG
GCGTAGAGGATCGAGATCT