Result of FASTA (omim) for pF1KE1963
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1963, 524 aa
  1>>>pF1KE1963 524 - 524 aa - 524 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3656+/-0.000336; mu= 14.7383+/- 0.021
 mean_var=116.2472+/-23.655, 0's: 0 Z-trim(117.7): 21  B-trim: 183 in 1/57
 Lambda= 0.118955
 statistics sampled from 29978 (29999) to 29978 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.352), width:  16
 Scan time: 10.170

The best scores are:                                      opt bits E(85289)
NP_954987 (OMIM: 191290,605407) tyrosine 3-monooxy ( 524) 3492 610.3 4.4e-174
NP_954986 (OMIM: 191290,605407) tyrosine 3-monooxy ( 528) 3474 607.2 3.8e-173
XP_011518637 (OMIM: 191290,605407) PREDICTED: tyro ( 501) 3103 543.5 5.3e-154
NP_000351 (OMIM: 191290,605407) tyrosine 3-monooxy ( 497) 3102 543.4  6e-154
NP_000268 (OMIM: 261600,612349) phenylalanine-4-hy ( 452) 1516 271.2 4.8e-72
NP_775489 (OMIM: 607478,608516,613003) tryptophan  ( 490) 1437 257.6 6.1e-68
NP_004170 (OMIM: 191060) tryptophan 5-hydroxylase  ( 444) 1422 255.0 3.4e-67
XP_016874859 (OMIM: 261600,612349) PREDICTED: phen ( 240)  581 110.5   6e-24


>>NP_954987 (OMIM: 191290,605407) tyrosine 3-monooxygena  (524 aa)
 initn: 3492 init1: 3492 opt: 3492  Z-score: 3246.3  bits: 610.3 E(85289): 4.4e-174
Smith-Waterman score: 3492; 99.8% identity (100.0% similar) in 524 aa overlap (1-524:1-524)

               10        20        30        40        50        60
pF1KE1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKP
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_954 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
              430       440       450       460       470       480

              490       500       510       520    
pF1KE1 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
       ::::::::::::::::::::::::::::::::::::::::::::
NP_954 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
              490       500       510       520    

>>NP_954986 (OMIM: 191290,605407) tyrosine 3-monooxygena  (528 aa)
 initn: 3478 init1: 3299 opt: 3474  Z-score: 3229.6  bits: 607.2 E(85289): 3.8e-173
Smith-Waterman score: 3474; 99.1% identity (99.2% similar) in 528 aa overlap (1-524:1-528)

               10        20        30            40        50      
pF1KE1 MPTPDATTPQAKGFRRAVSELDAKQAEAIM----GAPGPSLTGSPWPGTAAPAASYTPTP
       ::::::::::::::::::::::::::::::    ::::::::::::::::::::::::::
NP_954 MPTPDATTPQAKGFRRAVSELDAKQAEAIMVRGQGAPGPSLTGSPWPGTAAPAASYTPTP
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KE1 RSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPR
       :::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
NP_954 RSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPR
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KE1 ATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 ATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KE1 QVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 QVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEI
              190       200       210       220       230       240

        240       250       260       270       280       290      
pF1KE1 AFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 AFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNI
              250       260       270       280       290       300

        300       310       320       330       340       350      
pF1KE1 PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCC
              310       320       330       340       350       360

        360       370       380       390       400       410      
pF1KE1 HELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 HELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG
              370       380       390       400       410       420

        420       430       440       450       460       470      
pF1KE1 AGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 AGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYAS
              430       440       450       460       470       480

        480       490       500       510       520    
pF1KE1 RIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
       ::::::::::::::::::::::::::::::::::::::::::::::::
NP_954 RIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
              490       500       510       520        

>>XP_011518637 (OMIM: 191290,605407) PREDICTED: tyrosine  (501 aa)
 initn: 3282 init1: 3103 opt: 3103  Z-score: 2885.8  bits: 543.5 E(85289): 5.3e-154
Smith-Waterman score: 3238; 94.8% identity (95.4% similar) in 524 aa overlap (1-524:1-501)

               10        20        30        40        50        60
pF1KE1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR
       ::::::::::::::::::::::::::::::      . :                 .:::
XP_011 MPTPDATTPQAKGFRRAVSELDAKQAEAIM------VRG-----------------QSPR
               10        20        30                              

               70        80        90       100       110       120
pF1KE1 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKP
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_011 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP
        40        50        60        70        80        90       

              130       140       150       160       170       180
pF1KE1 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
       100       110       120       130       140       150       

              190       200       210       220       230       240
pF1KE1 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
       160       170       180       190       200       210       

              250       260       270       280       290       300
pF1KE1 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
       220       230       240       250       260       270       

              310       320       330       340       350       360
pF1KE1 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
       280       290       300       310       320       330       

              370       380       390       400       410       420
pF1KE1 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
       340       350       360       370       380       390       

              430       440       450       460       470       480
pF1KE1 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
       400       410       420       430       440       450       

              490       500       510       520    
pF1KE1 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
       ::::::::::::::::::::::::::::::::::::::::::::
XP_011 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
       460       470       480       490       500 

>>NP_000351 (OMIM: 191290,605407) tyrosine 3-monooxygena  (497 aa)
 initn: 3281 init1: 3102 opt: 3102  Z-score: 2884.9  bits: 543.4 E(85289): 6e-154
Smith-Waterman score: 3231; 94.7% identity (94.8% similar) in 524 aa overlap (1-524:1-497)

               10        20        30        40        50        60
pF1KE1 MPTPDATTPQAKGFRRAVSELDAKQAEAIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPR
       ::::::::::::::::::::::::::::::                           :::
NP_000 MPTPDATTPQAKGFRRAVSELDAKQAEAIM---------------------------SPR
               10        20        30                              

               70        80        90       100       110       120
pF1KE1 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKP
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_000 FIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKP
            40        50        60        70        80        90   

              130       140       150       160       170       180
pF1KE1 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSE
           100       110       120       130       140       150   

              190       200       210       220       230       240
pF1KE1 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQY
           160       170       180       190       200       210   

              250       260       270       280       290       300
pF1KE1 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLE
           220       230       240       250       260       270   

              310       320       330       340       350       360
pF1KE1 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELL
           280       290       300       310       320       330   

              370       380       390       400       410       420
pF1KE1 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLL
           340       350       360       370       380       390   

              430       440       450       460       470       480
pF1KE1 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQR
           400       410       420       430       440       450   

              490       500       510       520    
pF1KE1 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
       ::::::::::::::::::::::::::::::::::::::::::::
NP_000 PFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
           460       470       480       490       

>>NP_000268 (OMIM: 261600,612349) phenylalanine-4-hydrox  (452 aa)
 initn: 1521 init1: 1442 opt: 1516  Z-score: 1414.5  bits: 271.2 E(85289): 4.8e-72
Smith-Waterman score: 1516; 53.2% identity (78.3% similar) in 423 aa overlap (109-523:35-451)

       80        90       100       110       120       130        
pF1KE1 AVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKPSALSRAVKVFETFEAKIH
                                     ..:.:: .  . .::......::  .... 
NP_000 VLENPGLGRKLSDFGQETSYIEDNCNQNGAISLIFSLKE-EVGALAKVLRLFEENDVNLT
           10        20        30        40         50        60   

      140       150       160       170       180               190
pF1KE1 HLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSEDV--------RSPAGPKV
       :.:.::.   :    . :.:..:. :  .: :: . .. . .:.        :.     :
NP_000 HIESRPS---RLKKDEYEFFTHLDKR--SLPALTNIIKILRHDIGATVHELSRDKKKDTV
            70           80          90       100       110        

              200       210       220       230       240       250
pF1KE1 PWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRVE
       ::::: ..:::.  . . ..  .:: :::::.: ::: ::: .:.::..::::.::::::
NP_000 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE
      120       130       140       150       160       170        

              260       270       280       290       300       310
pF1KE1 YTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERT
       :  ::  ::  :. :::.:: :::: :. . : :::.. :..:::::::::::.::.  :
NP_000 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCT
      180       190       200       210       220       230        

              320       330       340       350       360       370
pF1KE1 GFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRT
       ::.:::::::::.::::..::::::.:::::::.:.::..:::: :::::::::...::.
NP_000 GFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRS
      240       250       260       270       280       290        

              380       390       400       410       420       430
pF1KE1 FAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLLSSYGELLHCL
       ::::::.:::::::: :: ::::.:.::::::::::::.  .::::::::::.::: .::
NP_000 FAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCL
      300       310       320       330       340       350        

              440       450       460       470       480       490
pF1KE1 SEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQRPFSVKFDPYT
       ::.:..  .. : .:.: :    .: .:.:.:::.:::.:.:..:. : :::::..::::
NP_000 SEKPKLLPLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPFSVRYDPYT
      360       370       380       390       400       410        

              500       510       520    
pF1KE1 LAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG
         :.:::. : ..   .....:.  :  ::. : 
NP_000 QRIEVLDNTQQLKILADSINSEIGILCSALQKIK
      420       430       440       450  

>>NP_775489 (OMIM: 607478,608516,613003) tryptophan 5-hy  (490 aa)
 initn: 1460 init1: 1436 opt: 1437  Z-score: 1340.7  bits: 257.6 E(85289): 6.1e-68
Smith-Waterman score: 1462; 47.3% identity (74.8% similar) in 480 aa overlap (58-523:9-484)

        30        40        50        60        70        80       
pF1KE1 AIMGAPGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAAAV
                                     : .. .::   ...:  :..  .....   
NP_775                       MQPAMMMFSSKYWARRGFSLDSAVPEEHQLLGSSTLNK
                                     10        20        30        

         90       100          110       120       130       140   
pF1KE1 P-SEPGDPLEAVAFEEKEG---KAMLNLLFSPRATKPSALSRAVKVFETFEAKIHHLETR
       : :  .:     .  ..:.   ..   ..:: . .. ..: .:...:.  .... :.:.:
NP_775 PNSGKNDDKGNKGSSKREAATESGKTAVVFSLK-NEVGGLVKALRLFQEKRVNMVHIESR
       40        50        60        70         80        90       

           150       160       170        180                190   
pF1KE1 PAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVR-QVSEDVRSPAG---------PKVPWF
        ..: :..  ..: ::  :  . ..  :.. .. :..  . .:             ::::
NP_775 KSRR-RSS--EVEIFVDCECGKTEFNELIQLLKFQTTIVTLNPPENIWTEEEELEDVPWF
       100          110       120       130       140       150    

           200       210       220       230       240       250   
pF1KE1 PRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRVEYTA
       :::.:::::: : :  .  .:: :::::.:.::::::: ....:. :..:.:::::::: 
NP_775 PRKISELDKCSHRVLMYGSELDADHPGFKDNVYRQRRKYFVDVAMGYKYGQPIPRVEYTE
          160       170       180       190       200       210    

           260       270       280       290       300       310   
pF1KE1 EEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERTGFQ
       ::  ::  :.  :. :: :::: :.:. : :: .. ::::::.::::::: :::::.:: 
NP_775 EETKTWGVVFRELSKLYPTHACREYLKNFPLLTKYCGYREDNVPQLEDVSMFLKERSGFT
          220       230       240       250       260       270    

           320       330       340       350       360       370   
pF1KE1 LRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQ
       .::::: :: :::::.::.:::.:::::::.:.:...:::: :::::::::.:::  :::
NP_775 VRPVAGYLSPRDFLAGLAYRVFHCTQYIRHGSDPLYTPEPDTCHELLGHVPLLADPKFAQ
          280       290       300       310       320       330    

           380       390       400       410       420       430   
pF1KE1 FSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLLSSYGELLHCLSEE
       :::.:::::::::::...::.: :.::.:::::::.:...::::::::: ::: : ::..
NP_775 FSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDK
          340       350       360       370       380       390    

           440       450       460       470       480       490   
pF1KE1 PEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQRPFSVKFDPYTLAI
         ..::::... .:     :.: .::::::: .::.:.:..:. : ::::: :.::: .:
NP_775 ACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYFNPYTQSI
          400       410       420       430       440       450    

           500       510       520         
pF1KE1 DVLDSPQAVRRSLEGVQDELDTLAHALSAIG     
       ..: . ....  .. ....:.:.  ::. .      
NP_775 EILKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI
          460       470       480       490

>>NP_004170 (OMIM: 191060) tryptophan 5-hydroxylase 1 [H  (444 aa)
 initn: 1426 init1: 1402 opt: 1422  Z-score: 1327.4  bits: 255.0 E(85289): 3.4e-67
Smith-Waterman score: 1449; 50.3% identity (78.7% similar) in 431 aa overlap (103-523:14-438)

             80        90       100       110       120       130  
pF1KE1 RKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKPSALSRAVKVFET
                                     ..:.:  .:.:: . .. ..: .:.:.:. 
NP_004                  MIEDNKENKDHSLERGRA--SLIFSLK-NEVGGLIKALKIFQE
                                10          20         30        40

            140       150       160          170           180     
pF1KE1 FEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRR---GDLAALL---SGVRQVS-ED---V
        .... :.:.: ..:  .   ..: ::  .. :   .:.  ::   ..: .:.  :   .
NP_004 KHVNLLHIESRKSKRRNS---EFEIFVDCDINREQLNDIFHLLKSHTNVLSVNLPDNFTL
               50           60        70        80        90       

            190       200       210       220       230       240  
pF1KE1 RSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRH
       .  .   :::::.:.:.::.: . :  .  .:: :::::.:.:::.::: .:..:..:.:
NP_004 KEDGMETVPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKH
       100       110       120       130       140       150       

            250       260       270       280       290       300  
pF1KE1 GDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDV
       :::::.::.: ::: ::  :.  :. :: :::: :.:. . :: .. :::::::::::::
NP_004 GDPIPKVEFTEEEIKTWGTVFQELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDV
       160       170       180       190       200       210       

            310       320       330       340       350       360  
pF1KE1 SRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGH
       : ::::::::..::::: :: ::::..::::::.::::.::.:.:...:::: :::::::
NP_004 SNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGH
       220       230       240       250       260       270       

            370       380       390       400       410       420  
pF1KE1 VPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLLSS
       ::.::. .::::::.:::::::::.: ..::.: :.::::::::::.:.....:::::::
NP_004 VPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSS
       280       290       300       310       320       330       

            430       440       450       460       470       480  
pF1KE1 YGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQRPF
        .:: : :: . ... :::. .  :     :.:.:::::::: :::.:.: ... :.:::
NP_004 ISELKHALSGHAKVKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTIKRPF
       340       350       360       370       380       390       

            490       500       510       520         
pF1KE1 SVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG     
       .::..::: .:..: . ...  ... .: .::... ::. .      
NP_004 GVKYNPYTRSIQILKDTKSITSAMNELQHDLDVVSDALAKVSRKPSI
       400       410       420       430       440    

>>XP_016874859 (OMIM: 261600,612349) PREDICTED: phenylal  (240 aa)
 initn: 586 init1: 507 opt: 581  Z-score: 551.0  bits: 110.5 E(85289): 6e-24
Smith-Waterman score: 581; 44.0% identity (71.0% similar) in 207 aa overlap (109-307:35-235)

       80        90       100       110       120       130        
pF1KE1 AVAAAAAAVPSEPGDPLEAVAFEEKEGKAMLNLLFSPRATKPSALSRAVKVFETFEAKIH
                                     ..:.:: .  . .::......::  .... 
XP_016 VLENPGLGRKLSDFGQETSYIEDNCNQNGAISLIFSLKE-EVGALAKVLRLFEENDVNLT
           10        20        30        40         50        60   

      140       150       160       170       180               190
pF1KE1 HLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSEDV--------RSPAGPKV
       :.:.::.   :    . :.:..:. :  .: :: . .. . .:.        :.     :
XP_016 HIESRPS---RLKKDEYEFFTHLDKR--SLPALTNIIKILRHDIGATVHELSRDKKKDTV
            70           80          90       100       110        

              200       210       220       230       240       250
pF1KE1 PWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRVE
       ::::: ..:::.  . . ..  .:: :::::.: ::: ::: .:.::..::::.::::::
XP_016 PWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVE
      120       130       140       150       160       170        

              260       270       280       290       300       310
pF1KE1 YTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERT
       :  ::  ::  :. :::.:: :::: :. . : :::.. :..:::::::::::.::.   
XP_016 YMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQIPA
      180       190       200       210       220       230        

              320       330       340       350       360       370
pF1KE1 GFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRT
                                                                   
XP_016 VL                                                          
      240                                                          




524 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 02:35:16 2016 done: Mon Nov  7 02:35:18 2016
 Total Scan time: 10.170 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com