GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:20:40

Sequence gi568815581f:66944661_67156268 : 211608 bp : 45.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  13668  13763   96  2  0   77   41    97 0.494   4.21
 1.02 Term +  16161  16373  213  2  0   99   47   134 0.609   7.63
 1.03 PlyA +  16743  16748    6                              -0.45

 2.00 Prom +  16814  16853   40                              -6.86
 2.01 Init +  20252  20471  220  1  1  107  102   509 0.966  50.99
 2.02 Term +  22978  23111  134  2  2   74   49    55 0.434  -1.55
 2.03 PlyA +  26246  26251    6                               1.05

 3.06 PlyA -  27186  27181    6                               1.05
 3.05 Term -  27795  27709   87  0  0   62   48   123 0.127   3.36
 3.04 Intr -  32742  32634  109  2  1   46   69    78 0.114   1.99
 3.03 Intr -  49952  49775  178  0  1   56   72    80 0.147   2.18
 3.02 Intr -  53256  53191   66  1  0  123   64    16 0.523   1.58
 3.01 Init -  54062  54014   49  2  1   56   80    57 0.622   2.88
 3.00 Prom -  54799  54760   40                              -4.86

 4.00 Prom +  54933  54972   40                              -4.26
 4.01 Init +  57843  57909   67  2  1   63   89    83 0.949   7.21
 4.02 Intr +  71700  71804  105  1  0   84   49    71 0.781   2.99
 4.03 Intr +  73529  73612   84  0  0  119   75   169 0.970  18.49
 4.04 Intr +  76992  77123  132  1  0   77   84    18 0.365   0.92
 4.05 Intr +  79543  79569   27  2  0   72   75    77 0.873   2.89
 4.06 Intr +  80200  80340  141  2  0   77   99   285 0.999  28.82
 4.07 Term +  85806  86344  539  1  2  140   52   685 0.848  64.51
 4.08 PlyA +  87317  87322    6                               1.05

 5.04 PlyA -  87753  87748    6                              -0.45
 5.03 Term -  88152  87847  306  0  0  -15   53   268 0.703   8.12
 5.02 Intr -  88401  88365   37  2  1  127   75   -31 0.330  -2.24
 5.01 Init -  89858  89740  119  2  2   83   78    81 0.305   6.27
 5.00 Prom -  90883  90844   40                              -2.36

 6.00 Prom +  91008  91047   40                              -6.16
 6.01 Init +  94266  94303   38  2  2   90   78    -3 0.310  -1.45
 6.02 Intr +  94948  95033   86  1  2   65   49    99 0.359   3.16
 6.03 Intr +  95829  95926   98  1  2  105   37    41 0.270   0.43
 6.04 Intr +  99950 100229  280  1  1   66   49   472 0.394  38.15
 6.05 Intr + 104678 104812  135  0  0   73   81    21 0.243   0.44
 6.06 Intr + 109336 109695  360  2  0  136   48   233 0.963  19.29
 6.07 Intr + 110443 110580  138  2  0   84   74   186 0.999  17.24
 6.08 Term + 111385 111611  227  2  2  101   40   340 0.999  27.44
 6.09 PlyA + 112118 112123    6                               1.05

 7.03 PlyA - 114262 114257    6                               1.05
 7.02 Term - 123135 123085   51  0  0   83   43    59 0.296  -1.67
 7.01 Init - 128047 127940  108  1  0   78   96    62 0.804   5.27
 7.00 Prom - 129466 129427   40                              -4.06

 8.17 PlyA - 133112 133107    6                               1.05
 8.16 Term - 133926 133592  335  1  2  101   37   298 0.998  20.77
 8.15 Intr - 152018 151762  257  1  2   11   80   140 0.029   2.59
 8.14 Intr - 164066 163832  235  0  1   66   61    66 0.131  -1.55
 8.13 Intr - 164672 164456  217  2  1   78   97    74 0.587   5.38
 8.12 Intr - 164849 164745  105  2  0   89   66    58 0.624   4.11
 8.11 Intr - 169743 169664   80  1  2   42   85    94 0.968   3.77
 8.10 Intr - 175952 175745  208  2  1   60  115    55 0.318   4.05
 8.09 Intr - 178500 178310  191  1  2   90   95    81 0.965   8.30
 8.08 Intr - 179354 179303   52  2  1   70  111    33 0.979   2.28
 8.07 Intr - 184195 183991  205  0  1   89   98   124 0.994  12.70
 8.06 Intr - 191538 191310  229  1  1   76   91    60 0.875   2.03
 8.05 Intr - 193454 193271  184  2  1   87  115   138 0.999  15.76
 8.04 Intr - 201230 201083  148  1  1   96   67    60 0.967   4.94
 8.03 Intr - 204054 203909  146  0  2  106   58   137 0.976  11.58
 8.02 Intr - 205325 205207  119  0  2   69  111    49 0.719   5.48
 8.01 Intr - 206564 206386  179  1  2  100   72    54 0.529   4.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_1|102_aa
MLINRASSRTDSSKRGRLQGTVHTGIRFANTQDQVQLPVGVRKQKGKLRSSRWGPPELIG
NNNDTAQQYLTMAKRLFSVLGKTLALKSLRFELRSDPTILQV

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_1|309_bp
atgctcatcaaccgggctagttccagaacagattctagcaagagaggccgcctgcagggc
acagtccatactgggatccggtttgcaaacacacaggaccaagtgcagctgccagtgggt
gtccgcaaacagaaaggcaaactgcggagctcccgttggggtccccctgaattaataggt
aataataatgacacagcccagcagtacttaacaatggcaaagaggctgtttagcgtcctt
ggaaaaactctggccttgaagtcactgagatttgagctaagatctgaccccaccatcctc
caggtgtga

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_2|117_aa
MVRCDRGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARGD
LTHSGLWRVCCIEEKYSKALPPKQNEQKKMKKSNLWAETKETLQQAANKTPRIKAEL

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_2|354_bp
atggtgcgatgcgaccgcgggctgcagatgctgctgaccacggccggagccttcgccgcc
ttctcgctcatggccatcgccatcggcaccgactactggctgtactccagcgcgcacatc
tgcaacggcaccaacctgaccatggacgacgggcccccgccccgccgcgcccgcggcgac
ctcacccactctggtctgtggcgggtgtgctgcatcgaagaaaagtattccaaagcatta
cctccaaagcaaaatgaacagaagaaaatgaaaaaatcaaacctctgggctgaaactaaa
gaaacactgcagcaggcagctaataagactccgaggataaaggcagaactctga

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_3|162_aa
MNGQPQSVPKAQGLALGVCSFSSVLNFHSHAPVGDLCTGHAFYLHDTQLPGSVVTRTGPL
GGQGGILADSSMGCLLNPSVPHLPALNSQDNDKIYLPGLSSDVIFDSLLRTKLLESQKVG
RAGSVGRAGSMGLQLEKEERYWFQCGEARYAAKHLQHRGQLL

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_3|489_bp
atgaatgggcagccccagagcgtgcccaaggcccagggtctggccctgggggtgtgcagc
ttctcctctgtcctcaatttccattctcatgctcctgttggtgacctctgcacagggcat
gctttctacttgcatgacacccagctcccaggctccgtggtcaccaggactgggcccctg
gggggccagggtggcattctggctgacagcagcatgggctgcttgcttaatccctctgtg
ccgcaccttcctgctctgaatagccaggataatgacaagatctatctcccaggacttagt
tcagatgtcatcttcgactcccttctgcgcacgaagctcctggagagtcagaaagtgggg
cgggctggatccgtggggcgggctggatccatggggcttcagctggagaaggaggagcgc
tactggttccagtgcggggaggccaggtatgctgctaaacacctacagcacagaggacag
ctcctgtga

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_4|364_aa
MHVCSLILAWLPESTGDLADLAGPMDLQESGLSLNTPAPWRQQLKGPNGGKSLGTAAGIY
KGHCFRINHFPEDNDYDHDSSEYLLRLPAHLALGLVPLSKSAFPVRWITSVPGRRGLVSG
LLGVHSVPGGADDDDDDQGIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLSAGI
LFVAAGLSNIIGIIVYISSNTGDPSDKRDEDKKNHYNYGWSFYFGALSFIVAETVGVLAV
NIYIEKNKELRFKTKREFLKASSSSPYARMPSYRYRRRRSRSSSRSTEASPSRDVSPMGL
KITGAIPMGELSMYTLSREPLKVTTAASYSPDQEASFLQVHDFFQQDLKEGFHVSMLNRR
TTPV

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_4|1095_bp
atgcatgtgtgctccctcatcctggcctggttgccagaaagcactggtgacctggcagac
ctggcagggcccatggaccttcaggaatcagggttgtcactgaacactccagctccttgg
aggcagcagctgaaggggcccaatggaggaaagagcttggggacggcagctgggatctat
aaagggcactgcttccggatcaatcacttcccagaggacaatgactacgaccacgacagc
tcggagtacctcctccggcttcctgcccaccttgccctgggcctggtgcccctctccaag
tctgcatttccagttaggtggataacttctgtgccaggccgcagggggctggtgtcaggg
ctgctgggagtccacagtgtgcccgggggggctgatgatgatgatgatgatcaaggcatc
gtgcgagcctccagcgtcttccccatcctcagcaccatcctgctcctgctgggtggcctg
tgcatcggtgctggcaggatctacagccgcaagaacaacatcgtcctcagtgccggcatc
ctcttcgtggctgcaggcctcagtaacatcatcggtatcatcgtctacatttccagcaac
acaggtgacccgagtgacaagcgggacgaagacaaaaagaaccattacaactacggctgg
tctttttactttggagctctgtctttcattgtggctgagaccgtgggcgtcctggctgta
aacatttacattgagaaaaataaagagttgaggtttaagaccaaacgggaattccttaag
gcgtcttcctcttctccttatgccaggatgccgagctacaggtaccggcgacggcgctcg
aggtccagctcaaggtccaccgaggcctcgccctccagggacgtgtcgcccatgggcctg
aagatcacaggggccatccccatgggggagctgtccatgtacacgctgtccagggagccc
ctcaaggtgaccaccgcagccagctacagccccgaccaggaggccagcttcctgcaggtg
catgactttttccagcaggacctgaaggaaggtttccacgtcagcatgctgaaccgacgg
acgacccctgtgtga

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_5|153_aa
MEESGALETVVREENDGPEDYTGTVRGDDKVKVGDKSQWRWALLTLPGTGQEGWPRAGEG
LELWCFSIRCWAHLDMPSDDANPDGSEGSGAQHTGALAGLISDPQHTATVSWGRYRWMRP
FLGAKEDGMDDDIITRPNGPGSEPQGAESTHGL

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_5|462_bp
atggaggaatcgggagcattggagactgtggtcagagaggagaatgatggccctgaagat
tacactgggacagttaggggtgatgacaaggtcaaggttggagataaaagtcaatggagg
tgggccctgcttactctgcctgggactgggcaagagggctggcctagagcaggtgaaggc
cttgagctctggtgcttcagcatccgctgctgggcacacttggacatgccatcagatgat
gccaaccctgatgggagcgaaggctctggagcacagcacacaggggccctggcaggcctc
atttcagatccccagcacacggcgacagtcagctggggccgctaccggtggatgcgtcct
ttcctgggggcaaaggaagatgggatggacgatgacatcatcactaggccgaacggacct
gggtctgaaccccagggggccgagtccacccatgggctgtga

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_6|453_aa
MHKVSPAREAHLRKSSSLSFDSDLLNKMFPAAAQAMGTNTAGVYRAHFENPSCGLKSPEG
PMSCLELLFSTPLHETQPPDPAQGTHASATTMSQTKMLKVRVTLFCILAGIVLAMTAVVT
DHWAVLSPHMEHHNTTCEAAHFGLWRICTKRIPMDDSKTCGPITLPGDKENQPLRVEIFD
KVTQVMSRAARTHTQTLTFTVLVNTLTTLQQPKKNCSYFRHFNPGESSEIFEFTTQKGEP
GWKGVWGDKRGLLCCAPLGQKVIGKSTDFLTPDEKKPVVHLNNSLVSSPLRRPQAAAFHL
QGPELPHLGARERLQKQHLLVGPYTRAAVVTGEYSISAAAIAIFSLGFIILGSLCVLLSL
GKKRDYLLRPASMFYAFAGLCILVSVEVMRQSVKRMIDSEDTVWIEYYYSWSFACACAAF
ILLFLGGLALLLFSLPRMPRNPWESCMDAEPEH

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_6|1362_bp
atgcacaaagtatcgccagccagggaagctcatctgagaaaatcatcatcattatctttt
gactctgacctgctcaataagatgtttcctgctgctgcccaagccatgggcaccaacact
gcaggggtgtacagggcgcactttgagaaccccagctgcgggctcaagtctcccgagggg
cccatgtcctgcctggagctcctattctccacacctctccacgagacgcagccgccggac
cctgcccagggcacccacgcctcggcgaccaccatgtcccagaccaaaatgctgaaggtc
cgcgtgaccctcttctgcatcctggcaggcatcgtgctggccatgacagccgtggtaacc
gaccactgggctgtgctgagcccccacatggagcaccacaacactacctgcgaggcggcc
cacttcggcctctggcggatttgtaccaagcgcatccccatggacgacagcaagacctgc
gggcccatcaccctgcccggggataaagaaaatcaaccactgagagttgagatatttgac
aaggtaacacaggtgatgagcagagcagccaggactcacactcagaccctaacattcacc
gttttagtcaatacattaactactttacaacaacccaagaagaactgttcctacttcagg
cattttaaccccggcgagagctcggagatcttcgaattcaccactcagaagggtgagcct
gggtggaaaggggtctggggtgacaagaggggacttctgtgttgtgcaccactgggccag
aaagtcattggcaaaagcactgacttcctcacgcctgatgagaagaagcctgtggtgcat
ttgaacaacagccttgtcagctccccgctccggaggccccaggcagccgccttccatctc
cagggcccggagcttccacacctcggggccagggagcgtttgcagaagcagcacctcctg
gtaggcccctacacaagggcagctgttgtgacgggagagtacagcatctcggcagccgcc
atcgccatcttcagccttggcttcatcatcctgggcagcctctgtgtcctcctgtccctc
gggaagaagagggactatctgctgcgacccgcgtccatgttctatgcctttgcaggtctc
tgcatcctcgtctcggtggaggtcatgcggcagtcggtgaagcgcatgattgacagtgag
gacaccgtctggatcgagtactattactcctggtcctttgcctgcgcctgtgccgccttc
atcctcctctttctcggcggtctcgccctcctgctgttctccctgcctcgaatgccccgg
aacccatgggagtcctgcatggatgctgagcccgagcactaa

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_7|52_aa
MERQALWIGHHPSSLSPLLGSALLFRSRVKELFGFRAKDTREPKWKVRKSQQ

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_7|159_bp
atggagcgacaggccctttggattggccaccacccctcctcactctcacccctgctgggg
tctgcactgctcttccgcagtagggtgaaggagctctttggttttagggcaaaagataca
cgggagcctaaatggaaggtccggaagtcacagcagtag

>gi568815581f:66944661_67156268|GENSCAN_predicted_peptide_8|963_aa
XVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQLDLEP
GFFTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLL
DRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLTFFTA
RGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRA
ELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDY
GFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENSSLHGITFEQI
KAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKQQQSPPKGKSLHHTQNDHFQNDG
IVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVVM
SVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVTIGQPQ
NQHQEKDQHEQNRNGKSDTNNSGPEINKIRTPEKKPTEPKQLPRPPFPIPQQHTLLNQQQ
NNLPEQPNQIPPQPNQAGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLRAI
AQPGPILPSHLNSFIDENPSGLPIGEALDRIHGSVALETLRQQQARFQQWSEHHAFLSQG
SAPYPHHHHPHLQHLPQPPLGLHQPPVRADWKLTSSAEDEVETTYSRLEIDEEAGEEKLE
ASRGWFMRFKERSHPHNIKVQGETASANIEAAASYPEDLAKIIDEDGYTKLQIFCVDKTA
SYWKKMLSRTFSAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESA
NSSSPQSSAGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQELSLGSSSGSNGFYS
YFK

>gi568815581f:66944661_67156268|GENSCAN_predicted_CDS_8|2892_bp
nnggtatatttcagaaatcgctgggtaaagactgtccacccagttgtgcatcagtactgt
ttgatctcaagcgcacattccacctttcagatgccccagaaagaagatattcttaaacat
cgagtggtggttgttaccttgaatacttcccagtacctctgtcagttggaccttgaacct
gggttttttacacacattctattagatgaagctgcccaggccatggagtgtgaaaccatt
atgcctctagcattagcaactcaaaacactcggattgtcttggctggtgatcacatgcag
ctcagtccttttgtttacagcgagtttgccagggagagaaaccttcacgtttcattactt
gaccgactctatgagcattaccctgctgagttcccatgtaggattctcctgtgtgagaac
taccgctcccatgaagctatcatcaattatacctctgagcttttctatgagggcaaactg
atggccagtgggaagcagccagcacacaaagatttctacccactaactttctttacagca
cgaggagaagatgtacaagaaaaaaatagcacagctttttataataatgcagaggtgttt
gaagtggtggaacgtgtagaagagttaagaaggaagtggccagtagcgtgggggaagtta
gatgatggcagtattggtgtggtgactccatatgctgatcaagtgtttagaatacgtgct
gaacttcgaaaaaagagattatctgatgttaatgtagaaagggtgctaaatgttcaagga
aagcaattcagagttttgtttcttagcacagtacgtacaagacatacttgtaaacataaa
cagacaccaattaaaaagaaagagcaacttctggaagattccacagaggacttagattat
ggttttttatctaactacaagcttctcaatactgccatcacaagagcacaatccctggtt
gctgtggtgggtgatcccattgctctgtgctctattggaagatgcaggaaattttgggaa
cggtttattgccctgtgtcatgaaaacagtagcctacatggaatcacttttgaacagatc
aaagcccagttagaggctttagaactaaagaagacatatgtgttgaatccgctggcacct
gaatttatcccccgggctctaagactgcagcattcaggaagtaccaacaaacagcagcaa
tcaccacccaaggggaaaagtcttcatcatacccagaatgatcacttccagaatgatgga
attgttcagcccaatccttctgtacttattggcaatcctattagagcatatactcctcca
ccccctcttggacctcacccaaatttgggaaaatctccaagccctgttcaaagaatagat
cctcacactgggacaagtattctttatgtacctgctgtctatggagggaatgtagttatg
tcggtgcctttacctgtaccatggacaggataccagggtaggtttgcagttgatcctcga
attattacacatcaggcagcaatggcctataacatgaacctattacagacacatggacga
ggatctcctattccttatggccttggacatcacccacctgtcaccataggccagccacaa
aatcagcatcaggagaaggatcaacatgagcaaaatcgaaatggtaaaagtgatacaaat
aattccggacctgaaattaataagattcgaacaccagagaaaaagccaacagaaccaaaa
cagctaccaagaccaccctttccaattccacagcagcacaccttgttaaatcagcagcag
aataatttgcctgaacaaccaaatcagataccacctcagccaaatcaggcgggacccaac
aatgctttttttaatagtgcagttgctcatcggccacagtctcctcctgcagaagctgta
attccggagcagcagccccctcccatgctgcaagaaggccacagtcctctgagagccatt
gcacaacccggccccattcttccttcacatctgaatagcttcattgatgagaacccctcg
ggattacctataggggaggctttagatcgtatacatgggagtgtcgctctggaaacatta
aggcagcagcaggcacggttccagcagtggagcgagcatcatgcctttctcagtcagggc
agcgctccatacccacaccatcaccatcctcacctccagcatcttcctcagccgcccctg
ggattacatcagccgccagtgagggcagactggaagctcaccagcagtgccgaagatgaa
gtggagaccacatactcaaggctggagatagatgaagaagctggagaagaaaagttggaa
gctagcagaggttggttcatgaggtttaaggaaagaagccatccccataacataaaagtg
caaggtgaaacagcaagtgctaatatagaagctgcagcaagttacccagaagatctagct
aagatcattgatgaagatggctacaccaaactacagattttctgtgtagacaaaacagcc
tcttattggaagaagatgctgtctaggactttctcagcgccacccaagactgtcaaaccc
cctgaggatcaactgaagtcggagaacctcgaggtgtccagttccttcaactacagtgtg
ctgcagcatcttggccagtttccaccccttatgcctaacaagcagatcgcggagtcggcc
aatagcagtagcccccagagctctgcggggggcaagcccgccatgtcctatgccagcgct
ctgcgggcccctccaaagcccaggccccctcctgagcaggccaagaagagtagcgaccct
ctgtctctcttccaggaactgagcctagggagctcatctggcagcaatggcttttactca
tattttaaataa