GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:05:51

Sequence gi568815590r:96131058_96333228 : 202171 bp : 42.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -    844    839    6                               1.05
 1.10 Term -  10576  10406  171  1  0  101   48   125 0.920   6.64
 1.09 Intr -  14467  13533  935  2  2  112   -4   838 0.473  66.98
 1.08 Intr -  16177  16068  110  0  2   92   40   147 0.961   9.31
 1.07 Intr -  21072  20972  101  0  2   59   55   131 0.993   4.89
 1.06 Intr -  21438  21163  276  0  0   95   78   157 0.978  12.19
 1.05 Intr -  22144  22101   44  2  2   62   84    32 0.590  -2.76
 1.04 Intr -  22533  22444   90  1  0   91   36   115 0.590   5.65
 1.03 Intr -  27273  26968  306  1  0   56   50   216 0.958  10.10
 1.02 Intr -  28462  28169  294  2  0   46    4   217 0.891   5.16
 1.01 Init -  29635  29230  406  1  1  102   97   254 0.981  22.50
 1.00 Prom -  42056  42017   40                              -5.15

 2.00 Prom +  43199  43238   40                              -7.55
 2.01 Init +  46459  46592  134  0  2   85  100    54 0.536   5.96
 2.02 Term +  48343  48511  169  1  1   44   38   168 0.932   3.77
 2.03 PlyA +  49000  49005    6                               1.05

 3.00 Prom +  51036  51075   40                              -7.35
 3.01 Init +  53168  53386  219  1  0   93   28   174 0.419  10.58
 3.02 Intr +  53988  54145  158  2  2   19   81   130 0.246   3.29
 3.03 Term +  57086  57254  169  2  1   51   35   135 0.249   0.87
 3.04 PlyA +  57661  57666    6                               1.05

 4.02 PlyA -  57722  57717    6                               1.05
 4.01 Sngl -  60539  60198  342  2  0   60   43   193 0.805   7.78
 4.00 Prom -  60821  60782   40                              -5.95

 5.04 PlyA -  62170  62165    6                               1.05
 5.03 Term - 100883 100678  206  0  2   62   49   235 0.581  13.55
 5.02 Intr - 102164 102099   66  0  0    8   94    99 0.453   0.46
 5.01 Init - 104473 104455   19  1  1   91  131     4 0.774   5.49
 5.00 Prom - 108372 108333   40                              -8.55

 6.05 PlyA - 108385 108380    6                               1.05
 6.04 Term - 108628 108434  195  1  0  133   33   100 0.777   5.43
 6.03 Intr - 113023 112862  162  1  0   72   95    42 0.596   2.55
 6.02 Intr - 114874 114803   72  1  0   48   97    81 0.672   3.68
 6.01 Init - 115348 115250   99  1  0   62   98    59 0.718   4.61
 6.00 Prom - 116238 116199   40                              -5.35

 7.00 Prom + 119202 119241   40                              -6.35
 7.01 Init + 119515 119669  155  0  2   82   15   265 0.865  18.11
 7.02 Term + 122367 122493  127  0  1  143   48    42 0.834   2.47
 7.03 PlyA + 122787 122792    6                              -0.45

 8.08 PlyA - 123628 123623    6                               1.05
 8.07 Term - 124182 124076  107  1  2   62   39    61 0.378  -3.81
 8.06 Intr - 126057 125905  153  1  0   60   97   186 0.953  15.82
 8.05 Intr - 127468 127300  169  1  1   74   86    13 0.753  -1.70
 8.04 Intr - 130754 130444  311  0  2   58  103   126 0.026   6.21
 8.03 Intr - 131200 131109   92  0  2  133   68    65 0.030   7.72
 8.02 Intr - 135280 135199   82  2  1   80   97    88 0.307   6.68
 8.01 Init - 144815 144758   58  2  1   67   70   110 0.462   8.62
 8.00 Prom - 146121 146082   40                              -8.15

 9.00 Prom + 150188 150227   40                              -6.65
 9.01 Init + 154129 154348  220  0  1   65   65    91 0.427   3.34
 9.02 Intr + 155965 156089  125  2  2  110   80   107 0.516  11.48
 9.03 Intr + 162408 162533  126  2  0   94   17    66 0.114   0.06
 9.04 Intr + 164041 164199  159  0  0   71   94    60 0.259   4.16
 9.05 Intr + 178500 178565   66  2  0   92   92    37 0.470   2.68
 9.06 Term + 185185 185289  105  0  0  108   42   116 0.875   6.43
 9.07 PlyA + 185613 185618    6                               1.05

10.04 PlyA - 189008 189003    6                               1.05
10.03 Term - 194618 194442  177  2  0   -6   37   195 0.229   1.70
10.02 Intr - 197060 196896  165  2  0    3   48   164 0.323   3.14
10.01 Init - 199187 198996  192  2  0   74   17   134 0.439   3.91
10.00 Prom - 199819 199780   40                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 130608 130444  165  0  0   56  103   181 0.802  14.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_1|910_aa
MDTPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDA
GREGQEPQPRPQDEPRAQQPRAQEPPGRGPRVVPHEYMLSIYRTYSIAEKLGINASFFQS
SKSANTITSFVDRGLARRRSSLYAIPEGWWGSGKSLVPSVGTPACVGVCGNPCGPFLPPA
LICSVASALKKTSHHLWSQKSGKDPQASETKLLKERDNNVEGDRKGREKKERKTSPPPSP
PLRCMPPILEIEEGLHVHPVWGGLCSRAKASRLAGPRSTSTATTPECGGGLGMRAVHSGR
RRCMTTRTASSKALSPPRLRVLRKCEERQFVDWEGAFVEDLVAPLGSRVTYRSTVQGRPP
LANPPETKGVSLKRLGAPDRTGPVVRSCPHKRTPKWGKKRILRPLRAALPARESFGLAQG
LSLALTPAEEETCKKGWILDVAGVEVICSPGTVGGTAVVTGPHRTEKNRDDEHLSSTHFW
NLVERSGPQGLKSRELDFKGSQEKDRLGHVRKSEPASATVSPEYKLGVAEAPEPVPPGYI
WTDDLSHTPLRRQKYLFDVSMLSDKEELVGAELRLFRQAPSAPWGPPAGPLHVQLFPCLS
PLLLDARTLDPQGAPPAGWEVFDVWQGLRHQPWKQLCLELRAAWGELDAGEAEARARGPQ
QPPPPDLRSLGFGRRVRPPQERALLVVFTRSQRKNLFAEMREQLGSAEAAGPGAGAEGSW
PPPSGAPDARPWLPSPGRRRRRTAFASRHGKRHGKKSRLRCSKKPLHVNFKELGWDDWII
APLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYI
DAGNNVVYKQYEDMIIYLLSDWSLNIDVGNVQLATILRVGQLAEEEMVQRPAALPEVLEC
VNCNCWHKGS

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_1|2733_bp
atggatactcccagggtcctgctctcggccgtcttcctcatcagttttctgtgggatttg
cccggtttccagcaggcttccatctcatcctcctcgtcgtccgccgagctgggttccacc
aagggcatgcgaagccgcaaggaaggcaagatgcagcgggcgccgcgcgacagtgacgcg
ggccgggagggccaggaaccacagccgcggcctcaggacgaaccccgggctcagcagccc
cgggcgcaggagccgccaggcaggggtccgcgcgtggtgccccacgagtacatgctgtca
atctacaggacttactccatcgctgagaagctgggcatcaatgccagctttttccagtct
tccaagtcggctaatacgatcaccagctttgtagacaggggactagccaggcgacgttcc
tctctctacgctattcctgagggctggtgggggtctgggaaatccctggtaccctctgtg
ggaacgcctgcatgtgtgggtgtctgcggaaacccttgcggccccttcttgccaccggcg
ttgatctgcagcgtggccagtgccctcaagaaaacctcgcaccacctctggtcccagaaa
tcagggaaggatccacaggcatcggaaactaagctcctaaaggagagagacaataatgtg
gaaggagacaggaaaggaagggagaaaaaggaaaggaagacctccccacccccatccccg
ccactgcgctgtatgcccccgatcctggagatagaggagggattgcatgtgcacccagtc
tggggaggcctctgttcccgagccaaggcctccagactagcaggaccgagatccacaagt
accgctacaaccccggaatgcggtggagggctggggatgcgagcggtccacagcgggagg
agacgctgcatgaccacccggacagcatcttcaaaggcgctgtctcctccgcgtctccgg
gttctcagaaaatgcgaagaaaggcagttcgttgactgggaaggcgccttcgtggaggac
ctggttgctcccctgggctcccgggtgacttaccggtcgacagtgcagggaaggccgccc
ctagccaaccccccagagacaaaaggagtttccttaaagcgccttggagctcctgatagg
actggccctgtggtcagatcgtgcccccacaaaaggacaccaaagtggggaaagaaacga
atccttaggcctctcagggctgcactgccagccagggagtcatttgggttagcacaaggg
ctgtcactggccttgacccctgcagaagaggaaacctgcaagaagggctggatccttgat
gtggctggggtggaggtcatctgttcacctggcactgtgggagggacagcagtggtgaca
gggcctcacaggactgagaagaatcgggatgatgagcacctttcctccactcacttctgg
aatcttgtggagagaagtggaccacaaggactgaagtccagagaactggatttcaaagga
agtcaagagaaggacaggttggggcatgtgcgtaagagtgaaccagccagtgctacggtc
agccccgagtacaaactgggtgtggcagaggctccagagccagtgcccccgggctacatc
tggactgacgatctctcgcacactcctctccggagacagaagtatttgtttgatgtgtcc
atgctctcagacaaagaagagctggtgggcgcggagctgcggctctttcgccaggcgccc
tcagcgccctgggggccaccagccgggccgctccacgtgcagctcttcccttgcctttcg
cccctactgctggacgcgcggaccctggacccgcagggggcgccgccggccggctgggaa
gtcttcgacgtgtggcagggcctgcgccaccagccctggaagcagctgtgcttggagctg
cgggccgcatggggcgagctggacgccggggaggccgaggcgcgcgcgcggggaccccag
caaccgccgcccccggacctgcggagtctgggcttcggccggagggtgcggcctccccag
gagcgggccctgctggtggtattcaccagatcccagcgcaagaacctgttcgcagagatg
cgcgagcagctgggctcggccgaggctgcgggcccgggcgcgggcgccgaggggtcgtgg
ccgccgccgtcgggcgccccggatgccaggccttggctgccctcgcccggccgccggcgg
cggcgcacggccttcgccagtcgccatggcaagcggcacggcaagaagtccaggctacgc
tgcagcaagaagcccctgcacgtgaacttcaaggagctgggctgggacgactggattatc
gcgcccctggagtacgaggcctatcactgcgagggtgtatgcgacttcccgctgcgctcg
cacctggagcccaccaaccacgccatcatccagacgctgatgaactccatggaccccggc
tccaccccgcccagctgctgcgtgcccaccaaattgactcccatcagcattctatacatc
gacgcgggcaataatgtggtctacaagcagtacgaggacatgatcatctacctgctctct
gattggtccctaaatattgacgtggggaatgtgcagttagctacaatccttagggttggt
cagctggcggaggaggaaatggtacagaggccagcagcattgcctgaagttttggagtgt
gtgaattgtaactgctggcataagggcagctga

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_2|100_aa
MVLFLSSDTVDKKSAKSCQQPWLKPLRESWCSVRENGGHLLERLRLKKTMHFQWKDPDGC
MSSLWWATFKQKLWEQCRTGDGPRAAAVLQRMSICCLALR

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_2|303_bp
atggtcctttttctctctagtgacacagttgacaagaagtcagcaaagagctgccagcaa
ccttggctgaagcccctcagagaaagctggtgctccgtcagagagaatgggggccacctc
ttagaaaggctaagacttaaaaagacaatgcatttccagtggaaggaccccgatggctgc
atgtcgtccctgtggtgggccactttcaaacagaagctctgggaacaatgccggaccggg
gatggtcccagagctgctgcggtgctgcagagaatgagcatctgctgcttggctctgaga
tga

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_3|181_aa
MEKLNNAPNIARLVSGRAWIHADSVTPGLLAPADEAVVIEQLSSSTIFTSETISPTAPYK
VNAFLPLLFCVPFTAGRNKGSGARTQNSSPKSRAPDRARAEVSPQKKVHLEDERQGLAWE
AATKARPESHGNSLSDIPGKLRGHPRKGLKLIRAIYSRRNVLHDRSGGDCHHTQMRHASP
Q

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_3|546_bp
atggagaagttaaataatgcccccaatattgcacggctagtaagcggcagggcctggatc
cacgctgactctgtgactccggggctcctcgctcctgccgatgaggcggtagtcattgag
cagctgtcttctagcacaatattcacttctgaaacgatctccccgacagccccctacaaa
gttaatgcatttcttccactccttttctgtgtaccctttactgcaggaagaaacaaaggg
tccggagcaaggacacagaacagcagccccaagtcgagagccccggacagggcaagggca
gaagtgtctcctcagaagaaggtgcacctggaagacgaaaggcagggtttggcttgggaa
gcagcaactaaagcaaggccagaatctcatgggaattcactttcagacattcctgggaag
cttcgaggacatccaaggaaaggtctgaaattgattagagcaatatattccaggagaaat
gttttgcacgaccgttctggaggagactgtcatcacactcagatgagacatgcaagccca
cagtaa

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_4|113_aa
MGKDFMTKTPKAMATKAKIDEWDLIKLKSFCTAKETIIRVNRQPTEWEKNFEIYPSDKRL
ISRIYKELKEIYRKNNNNNNKPHQKVGEGYEQTLLKKRHLCGQQTYEKKAHHH

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_4|342_bp
atgggaaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
gaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacaggcaacctacagaatgggagaaaaattttgaaatctatccatctgacaaaaggcta
atatccagaatctacaaagaacttaaagaaatttacaggaaaaacaacaacaacaacaac
aaaccccatcaaaaagtgggcgaaggatatgaacagacgcttctcaaaaaaagacattta
tgcggccaacaaacatacgaaaaaaaagctcatcatcactga

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_5|96_aa
MAGKQAASGKWLDGIRKWYYNAAGFNKLGLMRDDTIYEDEDVKEAIRRLPENLYNDRMFR
IKRALDLNLKHQILPKEQWTKYEEVAQLYLPDSVAH

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_5|291_bp
atggctggtaagcaggccgcatcaggcaagtggctggatggtattcgaaaatggtattac
aatgctgcaggattcaataaactggggttaatgcgagatgatacaatatacgaggatgaa
gatgtaaaagaagccataagaagacttcctgagaacctttataatgacaggatgtttcgc
attaagagggcactggacctgaacttgaagcatcagatcttgcctaaagagcagtggacc
aaatatgaagaggtagcacagctttatctacctgacagtgttgctcattaa

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_6|175_aa
MVRKAPFLLNFSVERLDNRLGFFQKELELSVKKTRDLVVRLPRLLTGSLEPVKENMKVYR
LELGFKHNEIQHMITRIPKMLTANKMKLTETFDFVHNVMSIPHHIIVKFPQVFNTRLFKV
KERHLFLTYLGRAQYDPAKPNYISLDKLVSIPDEIFCEEIAKASVQDFEKFLKTL

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_6|528_bp
atggtcagaaaagcaccatttttgctgaacttttcagtggaaagactggataacagattg
ggattttttcagaaagaacttgaacttagtgtgaagaagactagagatctggtagttcgt
ctcccaaggctgctaactggaagtctggaacccgtgaaagaaaatatgaaggtttatcgt
cttgaacttggttttaaacataacgaaattcaacatatgatcaccagaatcccaaagatg
ttaactgcaaataaaatgaaacttaccgagacgtttgattttgtgcacaatgtgatgagc
attccccaccacatcattgtcaagttcccacaggtatttaatacaaggctgtttaaggtc
aaagaaagacacttgtttcttacctatttaggaagagcacagtatgatccagcaaaacct
aactacatctctttggacaaactagtatctattcctgatgaaatattttgtgaagagatt
gccaaagcatcagtacaggactttgaaaaattcttaaaaacgctttag

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_7|93_aa
MVATCSHPATWEAEAEEEEEEEEEEEEEEEEEEEEEEGGGGGGEGEGEKKNGCLPLAEAA
KKPAGIGALVHRGWPPGIQIGQKTGLRSKQRKN

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_7|282_bp
atggtggccacctgtagtcacccagctacttgggaggctgaggcagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggaggagga
ggagggggggagggggagggggagaagaagaatgggtgcctcccactggctgaagctgcc
aagaagccagctggcataggagccctggtgcataggggttggcctcctgggatacagatc
gggcagaaaacaggtctcagaagcaaacagagaaaaaactag

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_8|323_aa
MVMALSDDKEEGSRSRDTEVLNRGEMKHRQIDDHLSTQIRRKATSSSPWTRPPLGWAAPP
GKGEVHEADDGEAEQGDAEASLPLEEFSDSKSTGLQRNSEPEKGSRGPWLALFRARSPLS
PRVTRHMVSPTPGAAHVGPGARLRCVGRAEEPACGAAGRDVRPSELVGPGVTRYGKQASP
QWGFKTYRTSSLWNSSQSTSSSSQENNSAQSSLLPSMNEQSQKTQNISSFDSELFLEELD
ELPPLSPMQPISEEEAIQIIADPPLPPASFTLRDYVDHSETLQKLVLLVTTLFRSSFVTE
WLQEPPILIVFSSAVLALISFQC

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_8|972_bp
atggtcatggcattgagtgatgacaaagaagaaggcagcagatcacgggatacagaagtt
ctaaatcgaggagaaatgaagcatagacaaattgatgatcacttaagtacacaaatccgc
agaaaggcaacgtcttctagcccttggacgcgccccccgctcggctgggccgccccacct
ggtaaaggcgaagtacatgaggctgacgatggtgaagctgagcagggtgatgctgaggca
tctctaccactcgaggaattttcagactccaagtccacaggacttcagaggaatagcgag
ccggagaagggtagccggggcccctggctggctcttttcagagcacgtagcccgctgtct
ccccgcgtaacccggcacatggtctcgcccactccgggcgcggcccacgtgggcccggga
gcgcggctgcgctgtgtagggcgggctgaggagccggcgtgcggcgcggcgggacgggac
gtgcggcccagcgagttggtcggtcccggggtcacccgctacgggaagcaggcctcgcca
cagtggggatttaagacttacaggacttcctccttatggaatagttcccagtctactagc
tcaagtagtcaggagaataattctgcccaaagcagtctgcttccttccatgaatgaacag
tcacagaagacacaaaatatatccagctttgattctgagctgtttctagaagaactggat
gaattgcctccattgtctccaatgcagccaatttcagaggaagaggctattcagattatt
gcagaccctccattgccaccagcttcattcacacttcgagactatgtggatcattctgag
actctgcagaagttggttcttctagtcactaccttgtttaggtcctcatttgtcactgag
tggctgcaggagcctcctatcttgatagtcttctcctcagcagtattggctctgatatct
ttccagtgttag

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_9|266_aa
MPSLKLSYKEGSKPAKILGEGSIPGKRKSCQNGPQLETTSRPVWPQYSAPWEKSRREVRE
SSGTDVIMGTVGQGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATREADVMASALH
CLQLKPVPPGSQGSACMQLSGCFKLQCPVALPGQGPQEYAVNCHVITWERIISHFDIFAF
GHFWGWAMKALLIRSYGLCWTISITWELTETVLRLPHRHTVQARRNTMLGVWSSVQPAEG
SRMFITMLFTIAKTWNPPSAHQWWTG

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_9|801_bp
atgccaagtctgaaactgtcatacaaagaaggatccaagcctgcaaagattctgggggag
gggagcatcccaggcaagaggaaaagctgccaaaatggcccacagctagaaaccacttcc
aggccagtgtggccccagtatagtgcaccctgggagaagagtaggagagaagtcagagag
tcatcgggcacagatgtaatcatggggactgtgggccagggactcagtgtgctctacttc
ctgttcctggtattcctactcttcctgaatttcgagcaggttaaatctctaatgtattgg
ctagatccaaatcttcgatacgccacaagggaagcagatgtcatggcttcagctctacac
tgtcttcagttaaagcctgttcctcctggttcccagggttctgcctgcatgcagctctct
ggctgctttaaactgcaatgccctgtggcccttccaggacaaggacctcaggagtatgct
gtgaactgccatgtgatcacctgggagaggattatcagccactttgatatttttgcattt
ggacatttctggggctgggccatgaaggccttgctgatccgtagttacggtctctgctgg
acaatcagtattacctgggagctgactgagacagtactacgcttacctcaccgacacaca
gtgcaagcgcgtaggaacacaatgctgggtgtttggagttctgttcagccagcagaaggt
tctcgaatgttcatcaccatgctgttcacaatagcaaagacatggaatccacctagtgcc
catcagtggtggactggataa

>gi568815590r:96131058_96333228|GENSCAN_predicted_peptide_10|177_aa
MPYRQRKVVKAWKRKTNDAAQKSSISQNFRVSVGINAGPFNAFLPSGRRLQNGWTWQRSD
LKGRAVAAAAPSSGKQQASGERQVLIITIVTQRVCCDCQIYFTCVQRGPFYTCPSKRKPQ
HGEWIWRAEWQENGCPDSRRGSGNGEEMELSCIVKLTDLSDWLIRRVMEDRKQPPGF

>gi568815590r:96131058_96333228|GENSCAN_predicted_CDS_10|534_bp
atgccgtacagacagaggaaagtggtgaaagcctggaagagaaaaacaaatgatgctgca
caaaaaagttcaatttcccagaacttcagggtttcagtgggaatcaatgcaggaccgttc
aatgcatttctgccgtctggacgccggttacaaaacggctggacgtggcagagatcagac
ctcaaggggagggcagtggcagctgccgctccctccagcggcaaacagcaggcaagtgga
gaacgacaggtgcttatcatcacaatcgtcacacaaagggtctgttgtgattgccaaatc
tacttcacctgcgtacaaagaggcccattttacacttgtcccagcaaacggaagccgcag
catggagaatggatttggagggcagaatggcaagaaaatgggtgtcctgacagccgcaga
ggcagtgggaatggagaggagatggagttgagctgcattgtcaaattaacagatcttagt
gactggctgattcgaagagtgatggaggacaggaagcagcctccaggtttttag