GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:37:43

Sequence gi568815590f:42597547_42836615 : 239069 bp : 44.68% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  29845  30061  217  0  1   91   58   109 0.072   6.28
 1.02 Term +  48065  48354  290  0  2   18   47   196 0.276   4.04
 1.03 PlyA +  48769  48774    6                               1.05

 2.00 Prom +  49785  49824   40                              -4.56
 2.01 Init +  59968  60014   47  0  2   73   52    37 0.080  -1.25
 2.02 Intr +  62217  62364  148  0  1   91   61    48 0.066   2.64
 2.03 Intr +  80995  81060   66  0  0  105   66    44 0.038   3.00
 2.04 Intr +  89262  89421  160  2  1   -4   86   161 0.061   6.26
 2.05 Term +  93769  94067  299  2  2   94   49   164 0.864   8.53
 2.06 PlyA +  95385  95390    6                               1.05

 3.00 Prom +  97263  97302   40                              -4.56
 3.01 Init + 100001 100052   52  1  1   71  115    45 0.476   6.47
 3.02 Intr + 111171 111322  152  1  2   77   89    47 0.440   3.58
 3.03 Intr + 133048 133157  110  0  2   43  106    56 0.182   1.98
 3.04 Intr + 134121 135003  883  0  1   49  109   688 0.925  58.33
 3.05 Term + 138938 139072  135  1  0  117   49    33 0.895   0.32
 3.06 PlyA + 140984 140989    6                               1.05

 4.00 Prom + 143026 143065   40                              -2.56
 4.01 Init + 146802 146958  157  2  1   75   79    38 0.574   1.67
 4.02 Intr + 148262 148429  168  0  0   50   68   100 0.379   4.12
 4.03 Term + 156224 156378  155  0  2   87   34    55 0.124  -1.92
 4.04 PlyA + 156637 156642    6                              -0.45

 5.07 PlyA - 157471 157466    6                               1.05
 5.06 Term - 158254 158201   54  1  0   77   54    50 0.421  -1.94
 5.05 Intr - 159278 158300  979  1  1   72   84   472 0.530  36.14
 5.04 Intr - 159491 159382  110  2  2   60   27   101 0.609   0.28
 5.03 Intr - 164288 164010  279  2  0    2   53   236 0.599   9.17
 5.02 Intr - 167658 167519  140  1  2  122   89   143 0.951  17.98
 5.01 Init - 170884 170806   79  1  1   72  100    43 0.918   3.12
 5.00 Prom - 173460 173421   40                              -4.86

 6.07 PlyA - 175283 175278    6                               1.05
 6.06 Term - 175313 175293   21  2  0  104   49     4 0.008  -3.59
 6.05 Intr - 190305 190119  187  2  1   62   55   110 0.010   4.79
 6.04 Intr - 216955 216875   81  0  0  100   89    40 0.417   4.05
 6.03 Intr - 217192 217109   84  0  0   92   33   109 0.389   4.74
 6.02 Intr - 219190 219123   68  1  2   45   97    51 0.365  -0.60
 6.01 Init - 225766 225692   75  1  0   52  108    47 0.477   4.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  80995  81087   93  0  0  105   49    89 0.828   4.53
S.002 Sngl +  87828  88091  264  2  0   69   43   183 0.887   7.10
S.003 Term - 128264 127998  267  2  0   10   41   253 0.858   8.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_1|168_aa
RGSSLREKSRGKQQVLVHEKRGHCGYSSEGMTHGEGCSKSLIPPTTNIQDYKYVAKVRYP
LVAHFVIKVNLFYPFHKLEEVDIEGVFNINNEASITHSLTNGEIVEMVLNPGDRGNSDEE
DDIVNTAEKVPVDEMMKTCTGLIKGLEQCRFITEQEIIMQFIKSKGDI

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_1|507_bp
agagggtcaagtttacgagagaaatccagggggaaacagcaagtcctggttcatgagaaa
cggggacactgtgggtattcatcagagggcatgacacacggggagggctgttcaaagagc
cttattccccctaccacaaacatacaggactacaaatatgtggcaaaagtgcgctaccct
ttggtagcacactttgtaataaaagtcaacctcttctacccctttcataagctggaagaa
gtggatattgaaggagtttttaacataaataatgaggcttccatcactcattcattgacc
aatggtgaaattgttgaaatggttctgaatccaggtgatcgtggtaacagtgatgaggaa
gatgacattgttaacactgcagaaaaagtgcctgttgatgagatgatgaaaacatgcact
gggcttattaaaggactagagcagtgcagattcataacagaacaagaaatcatcatgcag
tttataaaatcaaagggagacatctaa

>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_2|239_aa
MSDHHLGKNANPRNLDCLPDFSKATGPLLQDFSHGAAEEGDLWGDGTVCSGHQVASRFWG
DSARRDQIQHAGDYSPIPRRYLTVVQKRIKYVGIQIKRDVKDLFKENYKPLLNEIKEDTN
KHSMLMDRKNQYCENGHTAQALGVHLLWTLGWLTGARSPIHPQPVWPIRTQSCWDKASSN
PKPIVVEKQTLVPGQSEQDTSWSSDQAAALRNGGGGEDKVWTLLSVRQDEGKPQKRNND

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_2|720_bp
atgagtgaccatcacctggggaaaaacgcaaacccaagaaaccttgactgcttgcctgac
tttagcaaagccactggcccccttctccaggacttttctcatggagctgctgaggaaggt
gacctctggggtgatggtactgtgtgctcaggccatcaggtggcttctcgcttctggggt
gacagtgctagaagggatcaaatccagcatgcaggtgactacagtcccatcccccggcgt
tatctcacagtggtacagaagagaataaaatacgtaggaatccaaattaaaagggatgtg
aaggacctcttcaaggagaactacaaaccgctgctcaacgaaataaaggaggacacaaac
aaacattccatgctcatggataggaagaatcaatattgtgaaaatggccatactgcccaa
gctctgggcgtccatctgctgtggacactggggtggctgaccggggccagaagcccaata
cacccgcagcctgtttggcccatccgcacccagagttgctgggacaaagcttcttcaaac
ccaaagcctatcgtggtggaaaagcagactttagtgcctggccagtctgagcaggacact
tcctggtcctccgaccaggctgcagccctgaggaacggtggcggcggcgaggacaaagtg
tggacgctcctgtcagtcagacaagatgaggggaagcctcaaaaaagaaacaacgactga

>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_3|443_aa
MLPDFMLVLIVLGIPSSATTGFNSIAENEDALLRHLFQGYQKWVRPVLHSNDTIKVYFGL
KISQLVDVEWTDHKLRWNPDDYGGIHSIKVPSESLWLPDIVLFENADGRFEGSLMTKVIV
KSNGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTMVDLILINENVDRKDF
FDNGEWEILNAKGMKGNRRDGVYSYPFITYSFVLRRLPLFYTLFLIIPCLGLSFLTVLVF
YLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTV
FVINVHHRSSSTYHPMAPWVKRLFLQKLPKLLCMKDHVDRYSSPEKEESQPVVKGKVLEK
KKQKQLSDGEKVLVAFLEKAADSIRYISRHVKKEHFISQVVQDWKFVAQVLDRIFLWLFL
IVSVTGSVLIFTPALKMWLHSYH

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_3|1332_bp
atgctcccagattttatgctggttctcatcgtccttggcatcccttcctcagccaccaca
ggtttcaactcaatcgccgaaaatgaagatgccctcctcagacatttgttccaaggttat
cagaaatgggtccgccctgtattacattctaatgacaccataaaagtatattttggattg
aaaatatcccagcttgtagatgtggaatggacagaccacaagttacgctggaatcctgat
gattatggtgggatccattccattaaagttccatcagaatctctgtggcttcctgacata
gttctctttgaaaatgctgacggccgcttcgaaggctccctgatgaccaaggtcatcgtg
aaatcaaacggaactgttgtctggacccctcccgccagctacaaaagctcctgcaccatg
gacgtcacgtttttcccgttcgaccgacagaactgctccatgaagtttggatcctggact
tatgatggcaccatggttgacctcattttgatcaatgaaaatgtcgacagaaaagacttc
ttcgataacggagaatgggaaatactgaacgcaaaggggatgaaggggaacagaagggac
ggcgtgtactcctatccctttatcacgtattccttcgtcctgagacgcctgcctttattc
tataccctctttctcatcatcccctgcctggggctgtctttcctaacagttcttgtgttc
tatttaccttcggatgaaggagaaaaactttcattatccacatcggtcttggtttctctg
acagttttccttttagtgattgaagaaatcatcccatcgtcttccaaagtcattcctctc
attggagagtacctgctgttcatcatgatttttgtgaccctgtccatcattgttaccgtg
tttgtcattaacgttcaccacagatcttcttccacgtaccaccccatggccccctgggtt
aagaggctctttctgcagaaacttccaaaattactttgcatgaaagatcatgtggatcgc
tactcatccccagagaaagaggagagtcaaccagtagtgaaaggcaaagtcctcgaaaaa
aagaaacagaaacagcttagtgatggagaaaaagttctagttgcttttttggaaaaagct
gctgattccattagatacatttcgagacatgtgaagaaagaacattttatcagccaggta
gtacaagactggaaatttgtagctcaagttcttgaccgaatcttcctgtggctctttctg
atagtgtcagtaacaggctcggttctgatttttacccctgctttgaagatgtggctacat
agttaccattag

>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_4|159_aa
MASPVENNWYLNVFRMLYKNTIDWVASKLQKFIADSSGDWEAQGKVLAGLVCGAVFFPDP
PSSGLINLDDQDTPQSFILVIILSLKNQMIKHLRPHPAHGFEGSRMELEGRCTASVSASD
SRVCGKALTPWVTRDFPNCKKRSREATAQRARLILCNGG

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_4|480_bp
atggcatctccagttgagaataactggtatctaaatgtattcaggatgctatataaaaat
accatagattgggtggcttctaaactgcagaaatttattgctgacagttctggagactgg
gaagcccaaggaaaggtgctggcaggtctggtgtgtggtgcggtgtttttcccagacccg
ccctcaagtggcttaataaacctcgatgatcaagacacgcctcagtccttcattttggtc
atcattctttctctgaaaaatcagatgatcaagcacctgaggccacatccagcacatggc
tttgagggctcccgaatggagctggagggcagatgcacagcctctgtgagtgcctcagac
agcagagtctgcggcaaagccctgactccgtgggtcaccagggactttcccaactgcaag
aaacgctccagagaagcaactgctcagagagctagactcattctttgcaacggtgggtag

>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_5|546_aa
MLTSKGQGFLHGGLCLWLCVFTPFFKGCVGCATEERLFHKLFSHYNQFIRPVENVSDPVT
VHFEVAITQLANVPLMQLLCQLIDFSKKEVQGDGTRNGVDAVGLWTPPAEMSDSSAMPIG
GIWNWMEREYDLPDRSCSIGSADISEGVHIPMGHVHTTWSFSEPAEIWNDYKLRWDPMEY
DGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDI
TFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNDFWENSEWEIIDASGYKHDIKYNC
CEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSL
TVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVK
TVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGLARRPAKGKLASHGEPRHLKECFHCHKSN
ELATSKRRLSHQPLQWVVENSEHSPEVEDVINSVQFIAENMKSHNETKEPMGTLDAQSDL
QCDFCS

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_5|1641_bp
atgctgaccagcaaggggcagggattccttcatgggggcttgtgtctctggctgtgtgtg
ttcacacctttctttaaaggctgtgtgggctgtgcaactgaggagaggctcttccacaaa
ctgttttctcattacaaccagttcatcaggcctgtggaaaacgtttccgaccctgtcacg
gtacactttgaagtggccatcacccagctggccaacgtgcctttgatgcagctgctgtgt
caattaattgatttttccaagaaggaggtacagggtgatggcaccaggaatggagttgat
gctgtgggtctttggactcctccggcagagatgtctgatagcagtgccatgcccattggt
gggatctggaattggatggagagagagtatgacttgccagacaggtcctgctccataggg
tcagctgacatctctgaaggtgtccacatccccatgggccatgtccataccacctggagc
ttctccgagcctgcggaaatctggaatgattataaattgcgctgggatccaatggaatat
gatggcattgagactcttcgcgttcctgcagataagatttggaagcccgacattgttctc
tataacaatgctgttggtgacttccaagtagaaggcaaaacaaaagctcttcttaaatac
aatggcatgataacctggactccaccagctatttttaagagttcctgccctatggatatc
acctttttcccttttgatcatcaaaactgttccctaaaatttggttcctggacgtatgac
aaagctgaaattgatcttctaatcattggatcaaaagtggatatgaatgatttttgggaa
aacagtgaatgggaaatcattgatgcctctggctacaaacatgacatcaaatacaactgt
tgtgaagagatatacacagatataacctattctttctacattagaagattgccgatgttt
tacacgattaatctgatcatcccttgtctctttatttcatttctaaccgtgttggtcttt
taccttccttcggactgtggtgaaaaagtgacgctttgtatttcagtcctgctttctctg
actgtgtttttgctggtcatcacagaaaccatcccatccacatctctggtggtcccactg
gtgggtgagtacctgctgttcaccatgatctttgtcacactgtccatcgtggtgactgtg
tttgtgttgaacatacactaccgcaccccaaccacgcacacaatgcccaggtgggtgaag
acagttttcctgaagctgctgccccaggtcctgctgatgaggtggcctctggacaagaca
aggggcacaggctctgatgcagtgcccagaggccttgccaggaggcctgccaaaggcaag
cttgcaagccatggggaacccagacatcttaaagaatgcttccattgtcacaaatcaaat
gagcttgccacaagcaagagaagattaagtcatcagccattacagtgggtggtggaaaat
tcggagcactcgcctgaagttgaagatgtgattaacagtgttcagttcatagcagaaaac
atgaagagccacaatgaaaccaaggagcctatgggcactctggatgcacagtcagacctt
cagtgtgacttttgttcctga

>gi568815590f:42597547_42836615|GENSCAN_predicted_peptide_6|171_aa
MHRRTSLSNGSSINMIGPKHVLKAQRDLDKCFRLEEAHDTSPWVKICKAVCSGGITPSQR
ECELKCTGSLDRAGAELFALQVWRLPASDSYFGTGAHGLTSTCGVRGLAGSGVKLLTLTV
SVTALKAGRLELFILPGGFVVSLASGVKLQTFVVSVTAHKGSVDPKTSKLK

>gi568815590f:42597547_42836615|GENSCAN_predicted_CDS_6|516_bp
atgcatagaagaacttcattatcaaatggaagtagtataaacatgattgggcccaagcac
gtcctaaaggcacaaagagatctagacaaatgcttccgattagaagaggctcatgatact
tctccgtgggtcaagatttgtaaagcggtgtgctcgggcggcatcacacccagccagcgc
gagtgtgaactcaagtgcacgggcagccttgaccgggctggagctgagctgtttgcactg
caggtttggcgcctgcctgcatctgattcctactttgggacaggagcccatgggctgacg
agcacgtgtggggttcgtggtctcgctggctcaggagtgaagctgctgaccctcactgtg
agtgttacagctcttaaggcggggcgtctggagttgttcattcttcctggtgggttcgtg
gtctcactggcttcaggagtgaagctacagaccttcgtggtgagtgttacagctcataaa
ggcagtgtggacccaaaaacctccaaattgaaatga