GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:03:11

Sequence gi568815593f:163360693_163591161 : 230469 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4314   4541  228  2  0   69   42   239 0.960  13.05
 1.02 PlyA +   5088   5093    6                               1.05

 2.00 Prom +  18293  18332   40                              -5.55
 2.01 Sngl +  19735  20103  369  0  0   71   38   189 0.878   8.06
 2.02 PlyA +  20131  20136    6                              -1.95

 3.00 Prom +  20328  20367   40                              -3.65
 3.01 Init +  24598  24821  224  0  2   34   37   196 0.029   7.18
 3.02 Intr +  39801  39901  101  0  2   36   93    68 0.014   0.93
 3.03 Intr +  52340  52475  136  0  1   94   82    70 0.264   5.71
 3.04 Intr +  75794  75819   26  2  2  125  106     2 0.077   2.45
 3.05 Intr +  77030  77058   29  0  2  107   83    10 0.134  -0.68
 3.06 Intr +  78565  78828  264  0  0   76   95   153 0.953  11.59
 3.07 Intr +  80386  80553  168  0  0   81   93   100 0.933   9.02
 3.08 Intr +  81353  81451   99  1  0   49   95    49 0.619   1.09
 3.09 Term +  83645  83707   63  1  0  102   41    27 0.363  -3.69
 3.10 PlyA +  83750  83755    6                               1.05

 4.00 Prom +  93437  93476   40                              -4.75
 4.01 Sngl +  99206  99643  438  1  0   70   48   405 0.991  28.71
 4.02 PlyA + 100293 100298    6                               1.05

 5.00 Prom + 100706 100745   40                             -12.33
 5.01 Init + 101106 101169   64  2  1   53   79    24 0.416  -0.64
 5.02 Intr + 103164 103262   99  1  0  107   85    57 0.505   6.46
 5.03 Intr + 104031 104110   80  1  2   90  100    56 0.513   5.35
 5.04 Intr + 108949 109137  189  0  0   70   65   130 0.492   7.76
 5.05 Intr + 110671 110771  101  0  2   58   93    59 0.946   1.39
 5.06 Intr + 112487 112561   75  2  0   47   58   120 0.859   2.61
 5.07 Intr + 112687 112865  179  1  2   45   62   167 0.981   8.44
 5.08 Intr + 113365 113513  149  2  2   74   25   135 0.948   4.83
 5.09 Intr + 114766 114980  215  0  2   30    9   257 0.899   8.59
 5.10 Intr + 117992 118108  117  2  0   77   63   112 0.964   6.26
 5.11 Intr + 121950 122096  147  0  0   56   71   207 0.997  14.23
 5.12 Intr + 122328 122480  153  0  0   64   84   142 0.996   9.67
 5.13 Intr + 122576 122675  100  2  1   83   72    86 0.995   5.69
 5.14 Intr + 129698 129860  163  1  1  100  116    95 0.998  12.13
 5.15 Intr + 136237 136452  216  2  0   93   70   107 0.676   6.95
 5.16 Term + 136540 136631   92  2  2   87   39    75 0.730  -0.60
 5.17 PlyA + 136755 136760    6                               1.05

 6.00 Prom + 140013 140052   40                              -4.85
 6.01 Init + 142703 142732   30  1  0   82  110    42 0.750   5.59
 6.02 Intr + 151310 151504  195  1  0   85   80    92 0.929   6.79
 6.03 Intr + 152863 152977  115  0  1   42   95   115 0.972   6.70
 6.04 Intr + 153150 153302  153  1  0   82   82   134 0.998  11.32
 6.05 Intr + 155826 156019  194  1  2  104   99   201 0.999  21.09
 6.06 Intr + 156869 156982  114  1  0   68   95    30 0.725   1.42
 6.07 Term + 157501 157671  171  0  0   80   29   169 0.999   7.04
 6.08 PlyA + 158434 158439    6                               1.05

 7.06 PlyA - 159349 159344    6                               1.05
 7.05 Term - 163056 162966   91  2  1   74   47    85 0.568  -0.79
 7.04 Intr - 166580 166465  116  2  2   21   92    75 0.086  -0.47
 7.03 Intr - 170844 170799   46  2  1  107   81    34 0.416   2.09
 7.02 Intr - 174145 173972  174  0  0   67   86    78 0.856   3.63
 7.01 Init - 174832 174645  188  1  2   91  103    92 0.950   9.59
 7.00 Prom - 176105 176066   40                              -4.45

 8.04 PlyA - 177057 177052    6                               1.05
 8.03 Term - 199509 199318  192  0  0   70   46   143 0.853   4.74
 8.02 Intr - 204440 204316  125  0  2   76   83   119 0.808   9.58
 8.01 Init - 221325 221238   88  0  1   88   32   135 0.892   8.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  24598  24825  228  0  0   34   53   197 0.803   5.67
S.002 Sngl +  31181  31519  339  1  0   77   32   190 0.883   8.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_1|75_aa
LSVYPNYSWMWDKNSGPAECGYKERLEHCSPLPFTGRGQLPHMMGSSTEVEAAAGPVPRA
TGRSGTMGLKELGML

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_1|228_bp
ttgtcagtgtaccctaattattcttggatgtgggacaagaactcgggacctgctgaatgt
gggtacaaagaaagactggaacactgtagccctctgcccttcactggcagagggcagctg
ccccacatgatgggaagcagcactgaggtggaagcagcagcagggccagtccccagagcc
acaggccggagtgggacaatgggactaaaagagcttggcatgctgtaa

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_2|122_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRINRQPTEWEKILAIYSSDKGL
ISRIYNELKQIYKKKTNNPINKWVKDMNRHFSKEDIYAPKRHMKKCSSSLAIREIRIKTT
MR

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_2|369_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaaccaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagaata
aacaggcaacctacagaatgggagaaaattttggcaatctactcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatc
aacaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcacccaaa
agacacatgaaaaaatgctcatcatcactggccatcagagaaatacgaatcaaaaccaca
atgagataa

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_3|369_aa
MTDVLIKSGNFETARHRERILHENSGREQCDDSTSQGTANIANKPPEARRESPSQVSEGI
NSAKNVIVDFQPPELYVDTSFSSRINLNQQLGSTQNLHFSDDVFEAQKGPLEVGGSTAAM
TLGRKAPCQADLGFRLLELSTPLAVSSAALPFSRVLFCGIALGLSDLISWGEMIEVLTTT
DSQKLLHQLNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGF
DTETFSLAVNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATDLIRISQYR
FTVSDLMRMEKIVLEKPSVLALSIIALEIQAQKCVELTEGIECLQKHSKKTGDICIYDKN
FYTEPTASN

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_3|1110_bp
atgactgatgttcttataaaaagtggaaattttgagacagcaagacacagagagcgaata
ctacatgaaaattcaggcagagagcaatgtgatgattctacaagtcaaggaacagcaaac
attgccaacaaaccaccagaagccaggcgagagtctccctctcaagtctcagagggaatc
aactctgccaaaaatgtgatcgtggatttccaacctccggaactttatgtggacacatca
ttcagttcccgaatcaatttgaatcaacagctaggttccacacaaaaccttcatttttca
gatgatgtatttgaagcacagaaagggccccttgaagtgggcggctccaccgcagccatg
acactggggcgcaaggcaccttgccaagccgacctaggtttcaggcttctggagttgagc
actccattggcagtttcttctgcagctttgccattctctagagttttgttctgtggcatt
gccttgggcctctcggatctgatatcgtggggtgagatgatagaggtactgacaacaact
gactctcagaaactgctacaccagctgaatgccctgttggaacaggagtctagatgtcag
ccaaaggtctgtggtttgagactaattgagtctgcacacgataatggcctcagaatgact
gcaagactaagggactttgaagtaaaagatcttcttagtctaactcagttctttggcttt
gacacagagacattttctctagctgtgaatttactggacagattcctgtctaaaatgaag
gtacagcccaagcaccttgggtgtgttggactgagctgcttttatttggctgtaaaatca
atagaagaggaaaggaatgtcccattggcaactgacttgatccgaataagtcaatatagg
tttacggtttcagacttgatgagaatggaaaagattgtattggagaagccttctgtgttg
gcattgtctatcattgcattagagatccaagcacagaagtgtgtagagttaacagaagga
atagaatgtcttcagaaacattccaagaaaacaggtgacatttgtatctacgataaaaat
ttttatacagaacctactgcctcaaactga

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_4|145_aa
MPALEAALDILGARAWRHLNFNEHLLQGLVPLAPRGPARYHPTPLLKRGRHNPVPPGRGR
TRRSRAHARNPTLRLRLGLSARVTAHAQERKLALWCACSFFPLNGRLRHRQAPDERTEIQ
KSSHATNNGTELEPVKPELTTPSPK

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_4|438_bp
atgccggctctggaggccgcactggatatcctgggcgcgcgtgcctggcggcacctgaac
ttcaatgaacacctcctccaaggtctggtaccactggccccacggggtcccgcacggtac
caccccactccgctcctcaaacggggccgacataatccagtccctcccggccgcggccgc
accaggcggagccgagcgcacgcgcggaatcccacgcttaggctacgcctcggcctctcc
gctcgggtcactgcgcatgcgcaggaacgcaagctagcgctttggtgtgcgtgttcgttt
ttccctttgaatggccgtttacggcaccggcaggccccggatgaaagaactgaaatccag
aaaagttcacatgcaacgaacaatgggacagaattggaaccagtgaagccggaactcact
acaccgtcccctaagtga

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_5|712_aa
MLYAGTVLLDLVYSFQKPSEEGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNL
NVDKDTTLPASARKVKSSESKIRVLLQERGAQDRRIQDLETELEKMEARLNAALREKTSL
SANNATLEKQLIELTRTNELLKSKGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVS
IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEEN
IVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQK
ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERL
VKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQ
FESYKALTASEIEDLKLENSSLQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTK
SALKETEIKEITVSFLQKITDLQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINK
WRLLYEELYNKTKPFQEVSKLRCQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKE
NFALKTPLKEEQLLVPKSVLVTVLQRNRTSKRYIEKLIYYEELADMIMKAEKACNLPFAG
WRPRKAGVVQYKLESLRTIIAEAFNGPSISFSASTNSNINLIQKYPHRQPLK

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_5|2139_bp
atgctgtatgctgggactgtgctactagatcttgtttattccttccaaaagccaagtgag
gaaggttgtgcaccatctccaggtgcttatgatgttaaaactttagaagtattgaaagga
ccagtatcctttcagaaatcacaaagatttaaacaacaaaaagaatctaaacaaaatctt
aatgttgacaaagatactaccttgcctgcttcagctagaaaagttaagtcttcggaatca
aagattcgtgttcttctacaggaacgtggtgcccaggacaggcggatccaggatctggaa
actgagttggaaaagatggaagcaaggctaaatgctgcactaagggaaaaaacatctctc
tctgcaaataatgctacactggaaaaacaacttattgaattgaccaggactaatgaacta
ctaaaatctaagggtatgatggctaagcaagaaggcatggagatgaagctgcaggtcacc
caaaggagtctcgaagagtctcaagggaaaatagcccaactggagggaaaacttgtttca
atagagaaagaaaagattgatgaaaaatctgaaacagaaaaactcttggaatacatcgaa
gaaattagttgtgcttcagatcaagtggaaaaatacaagctagatattgcccagttagaa
gaaaatttgaaagagaagaatgatgaaattttaagccttaagcagtctcttgaggagaat
attgttatattatctaaacaagtagaagatctaaatgtgaaatgtcagctgcttgaaaaa
gaaaaagaagaccatgtcaacaggaatagagaacacaacgaaaatctaaatgcagagatg
caaaacttaaaacagaagtttattcttgaacaacaggaacgtgaaaagcttcaacaaaaa
gaattacaaattgattcacttctgcaacaagagaaagaattatcttcgagtcttcatcag
aagctctgttcttttcaagaggaaatggttaaagagaagaatctgtttgaggaagaatta
aagcaaacactggatgagcttgataaattacagcaaaaggaggaacaagctgaaaggctg
gtcaagcaattggaagaggaagcaaaatctagagctgaagaattaaaactcctagaagaa
aagctgaaagggaaggaggctgaactggagaaaagtagtgctgctcatacccaggccacc
ctgcttttgcaggaaaagtatgacagtatggtgcaaagccttgaagatgttactgctcaa
tttgaaagctataaagcgttaacagccagtgagatagaagatcttaagctggagaactca
tcattacaggaaaaagcggccaaggctgggaaaaatgcagaggatgttcagcatcagatt
ttggcaactgagagctcaaatcaagaatatgtaaggatgcttctagatctgcagaccaag
tcagcactaaaggaaacagaaattaaagaaatcacagtttcttttcttcaaaaaataact
gatttgcagaaccaactcaagcaacaggaggaagactttagaaaacagctggaagatgaa
gaaggaagaaaagctgaaaaagaaaatacaacagcagaattaactgaagaaattaacaag
tggcgtctcctctatgaagaactatataataaaacaaaaccttttcaggaagtatcaaaa
ctccgctgtcagcttgctaaaaaaaaacaaagtgagacaaaacttcaagaggaattgaat
aaagttctaggtatcaaacactttgatccttcaaaggcttttcatcatgaaagtaaagaa
aattttgccctgaagaccccattaaaagaagaacaactcttggtaccaaaatctgtatta
gtcacagttctccagagaaacagaaccagtaagagatacatagaaaagttgatttactat
gaggaattggctgacatgattatgaaggctgagaaggcttgcaacctgccatttgcaggc
tggagacccaggaaagcaggtgttgttcagtacaagcttgaaagcctgagaaccatcata
gcagaagccttcaatggaccctcaatcagctttagtgcatccactaattcaaatattaac
ctcattcagaaataccctcacagacagcccctgaagtag

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_6|323_aa
MPEMPEDMEQEEVNIPNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVN
LLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFL
IYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEK
LEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWS
GNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPF
RIGIKESLWPFLIDKRWRQTVFH

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_6|972_bp
atgcctgaaatgccagaggacatggagcaggaggaagttaacatccctaataggagggtt
ctggttactggtgccactgggcttcttggcagagctgtacacaaagaatttcagcagaat
aattggcatgcagttggctgtggtttcagaagagcaagaccaaaatttgaacaggttaat
ctgttggattctaatgcagttcatcacatcattcatgattttcagccccatgttatagta
cattgtgcagcagagagaagaccagatgttgtagaaaatcagccagatgctgcctctcaa
cttaatgtggatgcttctgggaatttagcaaaggaagcagctgctgttggagcatttctc
atctacattagctcagattatgtatttgatggaacaaatccaccttacagagaggaagac
ataccagctcccctaaatttgtatggcaaaacaaaattagatggagaaaaggctgtcctg
gagaacaatctaggagctgctgttttgaggattcctattctgtatggggaagttgaaaag
ctcgaagaaagtgctgtgactgttatgtttgataaagtgcagttcagcaacaagtcagca
aacatggatcactggcagcagaggttccccacacatgtcaaagatgtggccactgtgtgc
cggcagctagcagagaagagaatgctggatccatcaattaagggaacctttcactggtct
ggcaatgaacagatgactaagtatgaaatggcatgtgcaattgcagatgccttcaacctc
cccagcagtcacttaagacctattactgacagccctgtcctaggagcacaacgtccgaga
aatgctcagcttgactgctccaaattggagaccttgggcattggccaacgaacaccattt
cgaattggaatcaaagaatcactttggcctttcctcattgacaagagatggagacaaacg
gtctttcattag

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_7|204_aa
MAREDSTATTAEAFAMGHCHSWSTRLAHQPFVIRYKPTSRWLLLHFISSFKTFPEDHFTY
KNINISVLLLRKLKLSQVAKLAQAQTSRVFICKCQDLHSNSGLCDLKADTLPITRASEKQ
GLRTGPQAKEGDYLQKALTVEPSHLDLLWNLSQEATERCAAKTRKHNKVKEMKHSFGVNC
NYRRTLLKARTIIPLSTFQGPYVF

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_7|615_bp
atggccagggaggattctactgccaccactgccgaggcatttgccatgggtcattgccat
tcttggagcaccagactggcccatcagcccttcgtgatacgatacaaacccacaagcagg
tggttgctgctccacttcatttcctcattcaaaacatttcctgaagatcatttcacttac
aagaacataaatatctctgttttactgttgaggaaactaaagctcagtcaagttgctaaa
cttgcccaagctcaaacttccagggtgtttatatgtaaatgccaagatttgcattcaaac
tcaggtctctgtgaccttaaagctgatactctcccaattacaagagccagtgaaaaacag
gggttgaggacagggccgcaagccaaggaaggtgattacctccaaaaggcactcacagtc
gagccttcacatttggatctgttatggaacctttctcaggaagctactgaaagatgtgca
gccaaaactagaaagcacaacaaagtgaaagaaatgaaacacagtttcggggtgaattgt
aactacagacgaacacttctgaaggccagaaccatcatccctctttcaactttccaagga
ccttatgtgttctaa

>gi568815593f:163360693_163591161|GENSCAN_predicted_peptide_8|134_aa
MWIDITQPDQTLMNKKSPLITCLDVTALTRRVSWLVLSEDLQNPERLGDIRNPAGPSPSV
KGTLQSFCDRGREILISYHFTCMRMAMTTKTITSLGEDAQNWNLHTLLLGMENGAAAVEN
SSVVSENVKYRATI

>gi568815593f:163360693_163591161|GENSCAN_predicted_CDS_8|405_bp
atgtggattgacatcacccaacctgaccagacgctgatgaacaagaagagtccactgatc
acttgcttggatgtcacagcactgacaagaagagtgagctggttagttctgagtgaagac
ctccagaacccagagagactgggggacattaggaacccagcaggaccaagcccatccgtg
aaaggaacacttcagagtttctgtgaccgcggaagagaaatcctaataagttatcacttc
acatgcatgaggatggcaatgaccacaaagacaataacaagtcttggtgaggatgcacag
aactggaaccttcatacgttgctgctagggatggaaaatggtgcagctgccgtggaaaac
agttcagtagtttctgaaaatgttaaatatagagctaccatatga