GENSCAN 1.0	Date run:  3-Jul-120	Time: 20:46:16

Sequence gi568815596f:203606697_203834909 : 228213 bp : 41.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15251  15331   81  1  0  105   98    58 0.537   9.63
 1.02 Term +  16608  16685   78  2  0   96   35    97 0.959   1.98
 1.03 PlyA +  17041  17046    6                               1.05

 2.05 PlyA -  17158  17153    6                               1.05
 2.04 Term -  19019  18896  124  1  1   96   44    68 0.215   0.08
 2.03 Intr -  20742  20715   28  1  1  101  108    -8 0.205  -1.24
 2.02 Intr -  28521  28238  284  2  2   31  100   315 0.462  23.14
 2.01 Init -  29160  28535  626  0  2   18   66   547 0.223  40.36
 2.00 Prom -  32934  32895   40                              -5.25

 3.07 PlyA -  32943  32938    6                               1.05
 3.06 Term -  35483  35167  317  0  2  -49   43   359 0.221  11.82
 3.05 Intr -  39876  39682  195  1  0   71   92    93 0.332   6.46
 3.04 Intr -  44328  44151  178  0  1  111   72   119 0.438  11.17
 3.03 Intr -  61558  61444  115  0  1   73   92    34 0.008   1.83
 3.02 Intr -  67631  67511  121  0  1   92   34    59 0.001  -0.47
 3.01 Init -  75649  75571   79  1  1   29  119    82 0.734   6.67
 3.00 Prom -  86590  86551   40                              -3.15

 4.00 Prom +  93268  93307   40                              -3.55
 4.01 Init +  99828  99921   94  2  1   76   96   111 0.705  10.10
 4.02 Intr +  99935 100052  118  0  1   41   97   107 0.694   5.50
 4.03 Term + 109031 109214  184  2  1  108   43    77 0.645   1.23
 4.04 PlyA + 109495 109500    6                               1.05

 5.02 PlyA - 109790 109785    6                               1.05
 5.01 Sngl - 110881 110564  318  1  0   38   48   227 0.913   9.42
 5.00 Prom - 115071 115032   40                              -4.85

 6.00 Prom + 116800 116839   40                              -6.25
 6.01 Init + 116987 117060   74  1  2   76   72    47 0.249   2.49
 6.02 Intr + 118152 118198   47  0  2   66   58    42 0.662  -3.87
 6.03 Intr + 119937 120293  357  1  0  103   87   201 0.897  15.80
 6.04 Intr + 122952 123076  125  1  2  113   86     6 0.912   2.28
 6.05 Term + 128088 128216  129  2  0  131   47    85 0.871   5.90
 6.06 PlyA + 128957 128962    6                               1.05

 7.07 PlyA - 132108 132103    6                               1.05
 7.06 Term - 139773 139697   77  1  2  105   43    97 0.439   3.92
 7.05 Intr - 154964 154855  110  1  2   66   99    64 0.059   4.31
 7.04 Intr - 157980 157638  343  1  1  -27  -16   395 0.023  11.16
 7.03 Intr - 159004 158185  820  1  1   56   61   936 0.586  77.76
 7.02 Intr - 166157 166064   94  1  1  -34  108    75 0.016  -3.65
 7.01 Init - 166615 166242  374  1  2   80   -5   668 0.039  53.18
 7.00 Prom - 168965 168926   40                              -4.35

 8.08 PlyA - 170370 170365    6                               1.05
 8.07 Term - 178908 178760  149  1  2   54   32   187 0.007   6.78
 8.06 Intr - 182040 181930  111  1  0  113   95   -15 0.001   1.13
 8.05 Intr - 203788 203633  156  2  0  115   26    95 0.074   5.06
 8.04 Intr - 206026 205876  151  1  1   77   97     0 0.116  -1.39
 8.03 Intr - 206636 206521  116  0  2   46   68    96 0.421   2.65
 8.02 Intr - 212908 212722  187  1  1   71   35   107 0.292   2.04
 8.01 Init - 215827 215603  225  1  0   56   44   193 0.261  10.22
 8.00 Prom - 215883 215844   40                              -2.45

 9.03 PlyA - 216122 216117    6                               1.05
 9.02 Term - 224018 223625  394  1  1   16   42   205 0.408   2.22
 9.01 Intr - 227094 227009   86  0  2   58   98    73 0.360   3.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  61495  61589   95  0  2   75   84    90 0.851   7.20
S.002 Sngl - 166615 166238  378  1  0   80   33   661 0.947  55.71


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_1|52_aa
MANSQPEEGMLRLQSLLLHAQLDQETGEEAALVMSVAEEELSHTSLRISFME

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_1|159_bp
atggccaattctcagcctgaggaggggatgctgaggctccagagcctgttgcttcatgct
cagcttgaccaagaaactggggaagaggctgctttagtgatgagtgtggcagaggaggag
ctgtctcatactagcctgcggatttcctttatggagtaa

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_2|353_aa
MQVHKEIIDAVPNAIPGITDIELEIYGMEGIPEKDMDEGRQVLEQKTQESQKKKEQDDSD
EYDDDDSAGSTSFHPQPVQLQQGYIPPVAQPGLPPVPGAPGMPLGIAPLMPGVPPLMPGM
PPVMPAMPPGLHHQRKCTQSFFGENIMMPMGGIYHLDQEYTTWTRNTPPGPGIPPLMPGM
SPGIPSTPRPPFHILESSSDPNTGCFSTRPPAPTATVPAPQPPVTKPLFSSAGQAQAAVQ
GPVGTDFKPLNSTPEATTASPKPMFSAYTQSADSTTSTTNSTAAKPAASITSKPATLVTT
NATTSFMYKLGVNIHLLGSPNSRSAAPYGFHIEPVFCSWLPRTVSQVPSLPSM

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_2|1062_bp
atgcaggtgcataaagaaataatagatgctgtaccaaatgcaatacctgggataacagac
atagaattggaaatatatggtatggaaggtattccagaaaaagacatggatgaaggacga
caagttcttgaacagaaaacacaagaaagtcaaaaaaagaaggaacaagatgattctgat
gaatacgatgacgacgactctgcaggctcaacttcatttcacccacaacctgttcaactt
caacaaggttatattcctccagtggcacagccaggactgccgccagtaccaggagcacca
ggaatgcctctaggcatagctccattaatgccaggtgttcctcctctgatgccaggaatg
ccaccagttatgccagccatgccacctggattgcatcatcaaagaaaatgcacccagtca
tttttcggtgaaaacataatgatgccaatgggtggaatataccacctggaccaggaatac
accacctggaccaggaatacaccacctggaccaggaataccacctctgatgcctggaatg
tcaccaggtatcccctccactccccgacccccattccacatcctagaatcctccagtgac
ccaaacacaggctgtttcagcaccagaccacctgcaccaacagcaactgtacctgctcca
cagcctccagttacgaagcctcttttctccagtgctggacaggctcaggcagctgtccaa
ggacctgttggtacagatttcaaacccttaaatagtacccctgaagcaactacagcatcc
ccaaagcctatgttctctgcttatacacagtctgcagattcaaccactagtacaacaaat
agtactgcagctaaaccagcagcttcaataacaagtaagcctgctacacttgtaacaacc
aatgcaaccaccagttttatgtacaaactaggggtcaatatccacttgcttggctctcca
aattcccgctcagctgcgccttatggatttcatattgaaccagtcttctgctcctggtta
cccaggactgtgtctcaggtgcccagtctgcccagtatgtga

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_3|334_aa
MRKCGGEKAIPSNALNSLLSKAAEKPGKRGGAAQNPSLRLDVLQIFRNRNLRKTLKELPV
LKQQVLRHTQDQYLVSFNPIKLTLGISHHSCLVRNWIDLGLRTWWRVPFTAAGLQYTAAT
MTVHGEMSITCKQSVGSHPGSKAYKTFIQTLVFWDKSPQCYPQAGHWTPPQEFACKTPGP
ATSPAQSPLLCRHLEQLARPALACSHTLLPPGAECTVAVTTGSMLEYKPAVTVVAKVCSF
TPEASEATDPPGGTNNSRRAAIRAVTLTTKVRSLTSEPARARTHRKEETPNTSEHQKEQT
PDTPPLRTVTLTARVHGFILEVIETKNPPIPDTS

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_3|1005_bp
atgagaaaatgtggtggagaaaaggcaatcccctccaacgcccttaattcactcctctcc
aaagcagcagaaaagcctggaaagcgaggaggagcagcacaaaaccccagtttaaggctt
gatgtgcttcagatatttagaaacagaaatttaagaaagaccctgaaagagcttccagtc
ctaaagcaacaagttctgagacacactcaggatcaataccttgtatccttcaatccaatc
aagttgacactcggtattagccatcacagctgtctagtcagaaattggattgatctaggg
ttaaggacttggtggcgtgtcccctttacagctgcaggactccagtacacagcagccacc
atgactgttcatggggagatgagtatcacgtgtaagcaatcagttggctcccatccagga
agtaaggcttacaaaacatttatccagacactagtcttctgggacaaaagtccacagtgc
tatccacaggcaggacactggactccaccacaggagtttgcttgcaaaacacctggtcca
gccacaagccctgcacagagcccactcttgtgtcggcacttggagcagctggccaggcct
gcactcgcttgctcacacaccctcctcccaccaggggctgagtgcacagttgcagtgacc
acgggatccatgctggagtacaagccagctgtaacagtcgtcgcgaaggtctgcagcttc
actcctgaagccagcgaggccacagacccaccgggaggaacgaacaactccagacgcgcc
gccataagagctgtaacactcaccacaaaggtccgcagcttgacttctgagccagcgaga
gcacgaacccaccggaaagaagaaactccgaacacatccgaacatcagaaggaacaaact
ccggacacgccgcctttaagaactgtaacactcaccgcgagggtccacggcttcattctt
gaagtcattgagaccaagaacccaccaattccggacacatcctga

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_4|131_aa
MPCGLSALIMCPKGMVAVVVAVDDGDSQALAVPLTLRVPRGGGAGTLAHRQDKDAQAALG
SQLIPFNSSNRMNKFPLNLPHFVNGASTHTLTQCVNSGSVSIPVHHQSVKLSTNALFDPF
IPAATSTAQAL

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_4|396_bp
atgccttgtggtttgagtgccttgatcatgtgccctaaggggatggtggcggtggtggtg
gccgtggatgacggagactctcaggccttggcagttcccctcacacttcgggttcctcgg
ggaggaggggctggaaccctagcccatcgtcaggacaaagatgctcaggctgctcttggc
tctcaacttattcccttcaattcaagtaacaggatgaacaaatttcctcttaacttacct
cattttgtcaatggtgcctccactcatacccttacccagtgcgtgaactctgggtcggtt
tccattcctgttcaccatcagtctgtaaaactgagcaccaatgccttgtttgaccctttc
ataccagctgccacctccacagctcaggccttatga

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_5|105_aa
MAHTKLGKSRKVIYERTVGKGVARAEPRGVVPEPVTCSSRIMTTLRSKETRGQRSYQNQK
ARELCSGGHHDRSNDFHQEKQTKQPALAKIVYITTISYTKHINCS

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_5|318_bp
atggcacacacaaaattgggcaagagtaggaaggttatttatgaaaggactgttggcaaa
ggtgtggcaagagcagaaccacgaggggtagtgccagagcctgtgacttgcagcagcaga
attatgaccacccttaggtcgaaagagaccaggggacagcgaagttaccagaaccagaag
gcaagagagttgtgtagtggaggccaccatgacagaagcaatgacttccatcaagagaag
cagaccaagcaaccagctttggccaagattgtgtatatcacaactatcagttataccaag
cacattaactgttcttga

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_6|243_aa
MMRYHFTSTRMAIIEKMNNNKCRQGVGIRDVASNKLKRNARNKILVKQSPMLVAYDNAVN
LSCKYSYNLFSREFRASLHKGLDSAVEVCVVYGNYSQQLQVYSKTGFNCDGKLGNESVTF
YLQNLYVNQTDIYFCKIEVMYPPPYLDNEKSNGTIIHVKGKHLCPSPLFPGPSKPFWVLV
VVGGVLACYSLLVTVAFIIFWVRSKRSRLLHSDYMNMTPRRPGPTRKHYQPYAPPRDFAA
YRS

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_6|732_bp
atgatgagatatcacttcacgtccaccaggatggctataatagaaaagatgaacaataac
aagtgtcggcaaggtgtgggtatacgggatgttgcttcaaataaacttaaaagaaatgca
agaaacaagattttggtgaagcagtcgcccatgcttgtagcgtacgacaatgcggtcaac
cttagctgcaagtattcctacaatctcttctcaagggagttccgggcatcccttcacaaa
ggactggatagtgctgtggaagtctgtgttgtatatgggaattactcccagcagcttcag
gtttactcaaaaacggggttcaactgtgatgggaaattgggcaatgaatcagtgacattc
tacctccagaatttgtatgttaaccaaacagatatttacttctgcaaaattgaagttatg
tatcctcctccttacctagacaatgagaagagcaatggaaccattatccatgtgaaaggg
aaacacctttgtccaagtcccctatttcccggaccttctaagcccttttgggtgctggtg
gtggttggtggagtcctggcttgctatagcttgctagtaacagtggcctttattattttc
tgggtgaggagtaagaggagcaggctcctgcacagtgactacatgaacatgactccccgc
cgccccgggcccacccgcaagcattaccagccctatgccccaccacgcgacttcgcagcc
tatcgctcctga

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_7|605_aa
MNDEGSPIKVTLATLKMSVQPTASLGGFEITPPVVLQLKCGSGPVHISRQCLVAVEEDAE
SEDEEEEDVNLLSISGKRSASGGGSKVPQKKGKLAADEDDDDDDDDDDDENDNDFDDEEA
EEKHESKGQESFKKQEKTPKTPKGPSSVEDIIAKMQIRKLNRRSETPSQNNQQQSLQPSL
ICPVTLPPAGTVCASPLVSPPTWFCPGAQLPRPLVRSVASVYAGPGSSGSRISMSRSTSF
QGGLGSRSMAAGMAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLEMGNWKLESKIWE
KLESKIWEHLEKKGPQVRDWGHYFKTIEEDLTQIFTSTVDNTCIILQIDNAHLAADDFRV
KYETEPATCQSVENDIHGLHKVIDDTSVTQLQLETEIEALKEELLFLKKNHEEEVKGLQA
QIASSVDHGGLGDRPGLDEKSGGQLGEQPEGGVEACYTLQMEQLNGILLHLESELAQTWA
EGQGQAQEYQALPNIKVKLEAEIATYRRLLEDGEDFNFGDALDSSNSTQTTQKTPTCQQW
MAKWEGMKIESHNLICQAYVGTNCVSKESTQRYQLRSSRAACSQANSSPGRKEAISDAAC
RHNIL

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_7|1818_bp
atgaatgatgaaggcagtccaattaaagtcacactggcaactttgaaaatgtctgtacag
ccaactgcttcccttgggggctttgaaatcacaccaccagtggtcttacagttgaagtgt
ggttcagggccagtgcatattagtagacagtgcttagtagctgtggaggaagatgcagag
tcagaagatgaagaggaggaggatgtgaacctcttaagcatatctggaaagcggtctgcc
tctggaggtggtagcaaggttccacagaaaaaaggaaaacttgctgctgatgaagatgat
gatgatgatgatgatgatgatgatgatgaaaatgataatgattttgatgatgaggaagct
gaagaaaagcacgaatcaaaaggacaagaatccttcaaaaaacaagaaaaaactcccaaa
acaccaaaaggacctagttctgtagaagacattatagcaaaaatgcaaataaggaaactg
aaccgtaggagtgaaactccatctcaaaacaaccaacaacagagccttcagccaagcctg
atctgtcctgtcactctaccccctgccggcacagtatgcgcttcaccacttgtttcccca
ccaacttggttctgtccaggcgcccagctaccgcgcccactggtcagaagtgtggccagc
gtctatgcaggccctgggagctcaggttcccggatctccatgtcccgctccaccagcttc
cagggtggcttggggtccaggagcatggccgcaggtatggccgggggtctggcaggaatg
ggaggcatccagaacgagaaggagaccatgcaaagcctgaatgaccgcctggcctcctac
ctggacagagtgaggagcctggagatgggaaactggaagctggagagcaaaatctgggag
aagctggagagcaaaatctgggagcacctggagaagaagggaccccaggtcagagactgg
ggccactacttcaagaccatcgaggaggacctgactcagatcttcacaagtactgtggac
aatacctgcatcattctgcagatcgacaatgcccatcttgctgctgatgactttagagtc
aagtatgagacagagccggccacgtgccagtctgtggagaacgacatccatgggctccac
aaggtcattgatgacaccagtgtcactcagctgcagctagagacagagatcgaggctctc
aaggaggagctgctcttcctgaagaagaaccacgaagaggaagtaaaaggcctacaagcc
cagattgccagctctgttgaccatggaggccttggagatcgacctggactggatgaaaaa
tctggaggccagcttggagaacagcctgaagggggggtggaggcctgctacaccctgcag
atggaacaactcaatgggatcctgctgcacctggagtcagagctggcacagacctgggca
gagggacagggccaggcccaggagtaccaggccctgccaaacatcaaggtcaagctggag
gctgagatcgccacctaccgccgcctgctggaagatggcgaggacttcaattttggtgat
gctctggacagcagcaactccacgcaaaccacccaaaagactcccacctgccaacagtgg
atggcaaagtgggagggaatgaagattgaaagtcataatctaatctgccaagcatatgtg
ggcaccaactgtgtttctaaggaatctacacaaaggtatcagctcagaagctccagagca
gcatgttctcaggccaattcctcccctggtcgcaaagaggctatatcagatgctgcttgc
agacataacattctatag

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_8|364_aa
MGTGSRIHQSEAPTLESESDASDTKKQRLRPFLEVAAVAARLLFHGSSGCGAVPSLHLEQ
TFYCDSNRIQHLDRPLPTSTQGPATKIFWQNSPKTYLVNNDVFLRFPSPVFAQKVTPQAP
PHWYKRTTSRLDMIWRKGIYTKDLKAWAQTDTGTPTFLAAYPQEPKAGNNPNVYRQNLDL
VATAMSTAKNLFPRLPADRGGHMTISCPARCKLPVLEWGFWDSSLKGLIFQWALVDWISS
SPPTLCLWPFSSHQSHEQLSTHEHPRADQPWLMGIGYTALWSMCNMMFFKEINAFLFPIM
AGPFFRPILSLKINEVPSTSQGLRSAGGRHLDWQAAPPAAPVRDPLGEASWAPESGGEVE
NLYV

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_8|1095_bp
atgggcacaggatccaggatccaccaatcagaagcacccactctggagtctgaatcagat
gctagtgacacaaagaaacagcgactcagaccctttctagaggtggcggcagtggcagca
agattgcttttccacggcagcagtggctgcggtgctgtccccagcctgcacctggagcag
acattctactgtgatagcaacagaatacagcatctggacaggccactgcccacgtctaca
cagggccccgcaaccaagatattctggcagaactctccgaaaacttatttagtcaataac
gatgtatttttaaggtttccaagcccagtttttgctcagaaagtaaccccacaggctcct
ccacactggtacaagaggaccacctcaagattggacatgatctggagaaagggtatatac
acaaaagacttgaaagcatgggctcaaacagatactggtacaccaacattcctggcagcg
tatccacaagagccaaaagctggaaataacccgaatgtctaccgacagaaccttgatttg
gtggcgacagcaatgagcacggctaaaaatctgtttcccaggctccctgcagataggggt
ggccacatgactataagctgtccagcgagatgtaagcttccagtgcttgagtggggtttc
tgggacagttcattaaaaggccttatctttcagtgggcactggtggactggatttccagc
agcccaccaactctttgtctgtggcctttctctagccaccagagtcatgagcagctctcc
acccatgagcaccccagagcagaccaaccatggctgatgggaattgggtacactgccctt
tggtcaatgtgcaacatgatgttcttcaaagagattaatgcttttctatttccaataatg
gcaggcccgtttttcagaccaatcctttcactgaaaataaatgaagtcccatcgaccagc
caagggctgaggagtgccggcggacgacacctggactggcaggcagctccacctgcagcc
ccggtgcgggatccactgggtgaagccagctgggctcctgaatctggtggggaagtggag
aacctttatgtctag

>gi568815596f:203606697_203834909|GENSCAN_predicted_peptide_9|159_aa
LMWFLSSAWTLADTGRYCSSETNGDKGGRIPDVSHNGIPTIEMLWDSEAWAWSGHVTSYN
WEMTIVLTGSFSPHDREWMSQHPPLLVLPSGPPGNEMSPPTPNPKPMRGAAFLALFIPNS
ALWKQDCWLAKKPEITFPLLVEANAERHLERLLSSRFST

>gi568815596f:203606697_203834909|GENSCAN_predicted_CDS_9|480_bp
ttgatgtggtttctgtcttctgcctggaccctagcagatacaggtcgctactgcagctct
gaaacaaacggggataaaggtggcagaataccagatgtcagtcataatggaatccccacc
atcgaaatgctctgggacagtgaagcgtgggcatggtcagggcatgtgacctcatacaac
tgggaaatgactattgttctcaccgggtcattcagtccccatgatcgtgaatggatgagc
cagcaccctcctctcctagtgttgccgagtgggcctccaggaaatgaaatgtctccacca
acaccaaaccccaaaccaatgagaggagcagcatttctggccttattcatacccaactca
gctctgtggaaacaagactgctggcttgccaagaagccagaaataacatttcctctactg
gttgaggcaaatgctgagagacaccttgagaggttactgagttcacgcttttctacctag