Result of GENSCAN for pF1KE3761
GENSCAN 1.0	Date run:  6-Nov-116	Time: 07:09:04

Sequence gi568815597f:56545388_56807710 : 262323 bp : 38.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    405    551  147  2  0   51   93    60 0.124   2.31
 1.02 Term +   5368   5592  225  0  0   53   55   170 0.510   6.00
 1.03 PlyA +   7025   7030    6                               1.05

 2.08 PlyA -   7685   7680    6                               1.05
 2.07 Term -  27971  27850  122  0  2   89   38   141 0.719   6.86
 2.06 Intr -  32953  32885   69  2  0  115   54    26 0.357   0.14
 2.05 Intr -  33724  33491  234  2  0   54   80   239 0.668  16.44
 2.04 Intr -  34179  33996  184  0  1  -13   32   259 0.606   8.64
 2.03 Intr -  34333  34247   87  1  0   52   80    79 0.644   2.75
 2.02 Intr -  45716  45629   88  1  1   30   21   128 0.016  -0.65
 2.01 Init -  51424  51261  164  1  2   71   76    79 0.738   4.25
 2.00 Prom -  51478  51439   40                              -7.75

 3.00 Prom +  58118  58157   40                              -4.35
 3.01 Sngl +  65205  65582  378  2  0   49   47   204 0.776   8.31
 3.02 PlyA +  65898  65903    6                               1.05

 4.00 Prom +  67654  67693   40                              -8.05
 4.01 Init +  67707  68071  365  2  2   91   66   175 0.921  12.17
 4.02 Intr +  74039  74177  139  2  1   22   67   104 0.124   1.25
 4.03 Intr +  77880  78050  171  2  0    6   99   124 0.085   4.52
 4.04 Intr +  82399  82546  148  0  1   77   44    60 0.552  -0.61
 4.05 Intr +  87167  87275  109  0  1   89  100    46 0.181   4.32
 4.06 Intr +  89764  89822   59  1  2   75   76    42 0.242  -0.69
 4.07 Intr +  99919 100030  112  2  1  105   39   145 0.318   9.82
 4.08 Intr + 100736 100806   71  2  2   48   62    55 0.010  -3.19
 4.09 Intr + 128994 129135  142  1  1   87   93   135 0.792  12.39
 4.10 Intr + 133940 134076  137  2  2  104   84    22 0.529   2.69
 4.11 Term + 134468 134481   14  0  2  116   49    -6 0.195  -4.31
 4.12 PlyA + 135423 135428    6                               1.05

 5.00 Prom + 140857 140896   40                              -5.45
 5.01 Init + 141134 141217   84  1  0  100   77    58 0.690   6.77
 5.02 Intr + 146971 147115  145  0  1   77   88   132 0.966  11.03
 5.03 Intr + 148378 148465   88  2  1   54   90    33 0.704  -1.79
 5.04 Intr + 150548 150772  225  2  0   74   55   148 0.964   6.28
 5.05 Intr + 158584 159088  505  1  1   66   97   474 0.951  38.15
 5.06 Intr + 160705 160831  127  0  1   71   91    68 0.998   4.73
 5.07 Term + 162088 162326  239  2  2   97   39   171 0.992   8.45
 5.08 PlyA + 163496 163501    6                               1.05

 6.12 PlyA - 163631 163626    6                               1.05
 6.11 Term - 165015 164957   59  1  2   84   39    79 0.385  -0.53
 6.10 Intr - 174942 174804  139  0  1   37  -12   124 0.000  -3.58
 6.09 Intr - 178282 178183  100  0  1   75   93    40 0.770   2.39
 6.08 Intr - 181196 181110   87  1  0   67   81   118 0.765   7.17
 6.07 Intr - 191760 191700   61  1  1   87  106    74 0.705   5.97
 6.06 Intr - 193266 193238   29  2  2   81   97     8 0.445  -2.16
 6.05 Intr - 195408 195310   99  2  0   72   93    40 0.331   1.21
 6.04 Intr - 198879 198765  115  1  1  115   78    75 0.800   7.79
 6.03 Intr - 205816 205657  160  1  1   74   93    89 0.885   6.64
 6.02 Intr - 208548 208452   97  2  1   73   77    45 0.804   0.99
 6.01 Init - 213938 213832  107  2  2   52   98    77 0.776   4.84
 6.00 Prom - 217706 217667   40                              -3.45

 7.04 PlyA - 218074 218069    6                               1.05
 7.03 Term - 220316 220210  107  0  2   13   43   114 0.226  -3.01
 7.02 Intr - 222551 222442  110  1  2   91   97   107 0.969  10.91
 7.01 Init - 235198 235134   65  1  2   94   53    56 0.385   3.37
 7.00 Prom - 237515 237476   40                              -4.55

 8.06 PlyA - 238343 238338    6                               1.05
 8.05 Term - 240665 240410  256  1  1   86   48   185 0.993   8.37
 8.04 Intr - 241821 241788   34  1  1  131  107    58 0.999   8.36
 8.03 Intr - 243747 243586  162  1  0   91  116   115 0.995  13.63
 8.02 Intr - 247349 246669  681  0  0   91   92   347 0.476  26.03
 8.01 Init - 249008 248888  121  2  1   55   99    88 0.575   7.00

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 118095 118005   91  0  1   57   86   125 0.839   9.90
S.002 Intr - 174942 174786  157  0  1   37  101   146 0.985   9.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_1|123_aa
NKQHVDWQDTRHQGQPKIEIVKRQDWSQMQCQKRRGEHYGRPCKNKITLGEMPNNIIPLH
HGIAMTAAWYVCLRNGRFSWKYQLPRQLPLCGSGLEKKWKNPQLESNWKDKRGEQGPRNC
SKA

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_1|372_bp
aataaacaacacgtggactggcaggacaccagacaccagggacagccaaagatcgagata
gtcaaaaggcaagactggagccagatgcagtgccaaaagcgaagaggtgagcattatggg
aggccctgcaagaacaaaatcaccctgggcgaaatgccaaataacattattccccttcac
catggtattgccatgacagctgcctggtatgtttgcctgagaaatggaaggttttcatgg
aaatatcagcttccacgacagctccccctttgtggaagtggccttgaaaagaagtggaag
aatccccaactggaatctaattggaaggacaagaggggagagcaaggcccccggaattgt
tcaaaggcctga

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_2|315_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETMIRVYRKKKRKKEKKKEKRKKKKK
KEYTVSDKFYGEKESKGIRGDADTGVGENVALIILRLRQLKEGAVLSESHPSQCRKQTQA
ITAAAAAAAAPTAGGAGGAGGGGGGGGKVRVGAGAPELLGSAQLPFIKEPAAEEAASARR
RPGRLGVWLLLRDVFAGREARAAASAMQNYKYDKAIVPESKNGGSPALNNNPRRSGSKRV
LLICLDLFCLFMGAFPGLGAGHGFSNHLSAYCVPGVKIIKFARILPNGKLPLDADLKVSC
VFQCKDLVLFLMPRG

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_2|948_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatgatcagagtg
tacaggaaaaaaaaaagaaagaaagaaaagaaaaaagaaaaaagaaaaaagaagaagaag
aaggaatatacagtgtcagataaattctatggagaaaaagaaagcaagggcatcagggga
gatgcagacacgggggtgggggaaaatgtggccttaattatcctacgtcttaggcagctt
aaggaaggggctgtgctttcggaatcccatccgagccaatgcagaaaacaaacccaggcg
atcacagcagcagccgccgcggcagcagcaccaacagcaggaggagcaggaggagccgga
ggaggaggaggaggaggaggcaaagttagagttggggctggcgctccggagttgctgggc
tcagcgcagctcccattcattaaggaaccagctgcggaggaagcagcctcggccaggagg
cgacccgggcgcctgggtgtgtggctgctgttgcgggacgtcttcgcggggcgggaggct
cgcgccgcagccagcgccatgcaaaactacaagtacgacaaagcgatcgtcccggagagc
aagaacggcggcagcccggcgctcaacaacaacccgaggaggagcggcagcaagcgggtg
ctgctcatctgcctcgacctcttctgcctcttcatgggtgctttccccgggcttggtgct
gggcacggcttcagcaatcacttgagtgcctactgtgtgccaggtgtaaagataatcaag
tttgcaagaattcttccgaatggaaaattacccctggatgcagacctgaaggtgtcctgt
gtctttcagtgcaaagacttggtgttgtttctaatgccaagaggctaa

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_3|125_aa
MGDFNTLLSILDKSMRQKVNKDIQDLNSALHQADLIDIYRTLHLKSTEYTFFSAPHCTYS
KIDHIVGSKALLSKCKTAEIKTNCLSDHSANKLELRIKKLTQHHTTTRKLNNVLVNDYWQ
NKDVL

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_3|378_bp
atgggagactttaacaccctactgtcaatattagacaaatcaatgagacagaaggttaac
aaggatatccaggacttgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccacctcaaatcaacagaatatacattcttctcagcaccacattgcacttattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaacagcagaaatc
aaaacaaactgtctgtcagaccacagtgcaaacaaattagaactcaggattaagaaactc
actcaacaccacacaactacacggaaactgaacaacgtgctcgtgaatgactactggcag
aacaaagatgttctttga

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_4|488_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQLTEWEKIFAICPSDKGL
ISRIYKEVKQIYKKKSNNPIKKWAKDMNRHFSQEDIYAANRQMKKCSSSLVIREMQMKTT
MSWSLSPLHGDSGVGLDEVVSEFLIGRLGKYSLLPEVGGQVAVEMASKPHGKNGFLTGTA
LGLGALHLMLQLQLWLKGAKVHLRPLLQRVQALSLDGFHVVLGLQAFALATALLGCMCFC
SPGLPEESASFGRDQKLKRPSQFMQAHLKLLQGCGEAFWGTRMMIQRGKPNWGEKKAAIN
LGESGRCSLRRRAQIVAAIIPMCHGEDLVGGPAALWVGGGGGGYAERQAVERGRARRRWL
RSRSTTGGFLHVPGLSVVGGDCLGDAPGARGFGEHQLTGHKVAVKILNRQKIRSLDVVGK
IKREIQNLKLFRHPHIIKLFLSTFIKLFIGCSHSKVTESPEAKLFSLFQIYFSVFGGCGG
RVEGVYSI

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_4|1467_bp
atgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccataagagtg
aacaggcaacttacagaatgggagaaaatttttgcaatctgcccatctgacaaagggcta
atatccagaatctacaaagaagttaaacaaatttacaagaaaaagtcaaacaaccccatc
aaaaagtgggcaaaggatatgaacagacacttctcacaagaagacatttatgcagccaac
agacagatgaaaaaatgctcatcatcactggtcatcagagaaatgcaaatgaaaaccaca
atgagctggagcctgagtccgctgcatggagactctggtgtgggtcttgacgaggtggtc
agtgaattcctgatcgggagacttggtaaatacagtctccttccagaggtcgggggtcag
gtagctgtagaaatggcatcaaagccccatgggaaaaatggttttctcaccggaacagct
ttaggacttggtgccctgcatctcatgctccagctccagctctggctaaaaggggccaag
gtacatctcaggccattgcttcagagggtgcaagccctaagtcttgatggcttccatgtg
gtgttgggcctgcaggcctttgcgttggctacagctttgctgggctgtatgtgtttttgc
agtcctggactgcctgaggaaagcgcttcttttggtagagatcagaagctcaagagacca
agccaattcatgcaggcacatctaaaacttctgcaaggatgtggagaagctttctggggc
actaggatgatgatacaaagaggaaaaccaaactggggggaaaaaaaagctgccatcaat
ttgggggaaagtggaagatgttccctgagaaggagagctcaaattgtagctgccataatt
cctatgtgtcatggggaggacctggtgggagggcccgctgcactgtgggtaggcggcggc
ggcggcggctacgcggagcggcaggcggtggagcgaggccgcgcgcgccgaagatggctg
agaagcagaagcacgacgggcggattccttcacgttccaggactctcggttgttgggggt
gactgtttgggggatgctccaggggccagaggttttggagaacatcaattaacaggccat
aaagtggcagttaaaatcttaaatagacagaagattcgcagtttagatgttgttggaaaa
ataaaacgagaaattcaaaatctaaaactctttcgtcatcctcatattatcaaactattt
ctgagcacatttatcaaattgtttatcggatgttcacattctaaagtcacagagtcacct
gaagctaaacttttctctctcttccaaatttacttctctgtttttggagggtgtggtggg
agagtggagggagtctactcaatatga

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_5|470_aa
MVLAFTSSKGLRKLTIMTEGNWQPGCHMVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP
ENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGV
ILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDI
REHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAV
AYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMHIPPGLKPHPERMPPLIADSPKARC
PLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVRR
KNPVTGNYVKMSLQLYLVDNRSYLLDFKSIDDEVVEQRSGSSTPQRSCSAAGLHRPRSSF
DSTTAESHSLSGSLTGSLTGSTLSSVSPRLGSHTMDFFEMCASLITTLAR

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_5|1413_bp
atggtgctggcttttacttctagtaagggtctcaggaagcttacaatcatgacagaaggc
aactggcagccagggtgtcacatggttgaagagatggaagccaggcggctctttcagcag
attctgtctgctgtggattactgtcataggcatatggttgttcatcgagacctgaaacca
gagaatgtcctgttggatgcacacatgaatgccaagatagccgatttcggattatctaat
atgatgtcagatggtgaatttctgagaactagttgcggatctccaaattatgcagcacct
gaagtcatctcaggcagattgtatgcaggtcctgaagttgatatctggagctgtggtgtt
atcttgtatgctcttctttgtggcaccctcccatttgatgatgagcatgtacctacgtta
tttaagaagatccgagggggtgtcttttatatcccagaatatctcaatcgttctgtcgcc
actctcctgatgcatatgctgcaggttgacccactgaaacgagcaactatcaaagacata
agagagcatgaatggtttaaacaagatttgcccagttacttatttcctgaagacccttcc
tatgatgctaacgtcattgatgatgaggctgtgaaagaagtgtgtgaaaaatttgaatgt
acagaatcagaagtaatgaacagtttatatagtggtgaccctcaagaccagcttgcagtg
gcttatcatcttatcattgacaatcggagaataatgaaccaagccagtgagttctacctc
gcctctagtcctccatctggttcttttatggatgatagtgccatgcatattcccccaggc
ctgaaacctcatccagaaaggatgccacctcttatagcagacagccccaaagcaagatgt
ccattggatgcactgaatacgactaagcccaaatctttagctgtgaaaaaagccaagtgg
catcttggaatccgaagtcagagcaaaccgtatgacattatggctgaagtttaccgagct
atgaagcagctggattttgaatggaaggtagtgaatgcataccatcttcgtgtaagaaga
aaaaatccagtgactggcaattacgtgaaaatgagcttacaactttacctggttgataac
aggagctatcttttggactttaaaagcattgatgatgaagtagtggagcagagatctggt
tcctcaacacctcagcgttcctgttctgctgctggcttacacagaccaagatcaagtttt
gattccacaactgcagagagccattcactttctggctctctcactggctctttgaccgga
agcacattgtcttcagtttcacctcgcctgggcagtcacaccatggatttttttgaaatg
tgtgccagtctgattactactttagcccgttga

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_6|350_aa
MHFSEQIPIVKRCMTVIKIGIMSLNKIHRTIGKVKSAKHEDKKMKEKQPCELKPKNTEKE
PYSNHVFKVDACEGTPEKIQMTNVHTGRRNMLAGKQEAMIDIIQTNPCPEGPKLARHSQG
HCGHLEVLESTKETPDLGVSKTSSISEEIYDDVEYSRKEVLDGKEALKRLQQFFKKEKDR
FKIKKTKSKENLSAFSILLPDLELKSQEVIIYDDVDLSEKESKDEDKLKMWKPKFLTPKE
KKEKNGAEESERNFFKTKKQNLEKNRMKREEKLFRERFKVRSLLKYDKEIIVINTAVACS
NNSRNGIFDLPISPGEELEVIDTTEQNLVICQRPVKVFNADIHCHLRGEE

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_6|1053_bp
atgcatttctcagaacagatccccattgttaagcgatgcatgactgtaattaagattggc
atcatgtcattaaataaaatccacagaactattggaaaagtcaaaagtgctaaacatgaa
gataaaaaaatgaaggaaaaacaaccatgtgaattgaaacctaaaaacacagaaaaggaa
ccatattcaaaccatgttttcaaggtagatgcctgtgaagggacacctgaaaaaattcag
atgaccaacgtccacacaggtagaaggaacatgttggctggaaagcaagaggccatgatt
gacatcatccagacaaatccctgccctgagggcccaaagctggccaggcactcccaaggc
cactgtgggcatctggaggttttggagtcaactaaagaaactccagacctaggggtctct
aagacaagttccatctcggaggagatatatgatgatgtcgagtactccaggaaagaggtt
ttagatggaaaagaagcactcaaaagactgcagcaattcttcaagaaagaaaaggataga
tttaaaataaagaaaaccaagtcgaaagaaaacttaagtgcattttccattttgctgcct
gatttagaacttaagtctcaggaagttattatttatgatgatgtagacctgagtgaaaaa
gagtcaaaagatgaagataaactgaaaatgtggaagcccaagtttctgacaccaaaggaa
aaaaaagagaaaaacggtgctgaagaatcagaaagaaatttcttcaaaaccaagaagcaa
aacttagaaaagaacagaatgaaaagagaagaaaaactatttagagaaaggtttaaggta
cgttctcttctgaagtacgacaaagagattattgtcatcaatacagcagtggcctgttcc
aataattcaagaaatggaatatttgatttgccaataagtcctggagaagaattggaagtc
attgataccaccgaacaaaatctagtgatatgtcaaagacctgtcaaagtctttaatgct
gacatccactgtcatcttcgaggggaagagtag

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_7|93_aa
MESQVKSSRVMQLDQQHQGLTWLFNAEFEEPHNYEATISYLRHSGNSINLCTAKEIADLL
EVKKLATQKHQWAQQQLQLKPALSSQTTRKRAT

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_7|282_bp
atggagagtcaggtgaagtcatccagggtgatgcaactggatcagcagcaccagggcttg
acctggcttttcaatgcagaatttgaagaaccacataattacgaggcaacaatttcatat
ctgagacactctggcaactccattaacctgtgcactgcaaaagaaattgctgatcttttg
gaggtaaaaaagttagcaactcagaaacaccagtgggcacaacaacagcttcagctgaag
cctgctctttctagccaaacgaccaggaaaagggcaacctag

>gi568815597f:56545388_56807710|GENSCAN_predicted_peptide_8|417_aa
MAPLDIVLLPAKAKDDRTHLQNLMQFSGRKKDQQEEHGAGGPIKFPAGVSPKGDIGGTQS
TQILANGKPLSSNHKQRTPYCSSSESQPLQPQKIKLAQKSEIPKCSNSPGPLGKSTVCSA
TSSQKASLLLEVTQSNVEIITKEKVMVANSFRNKLWNWEKVSSQKSEMSSALLLANYGSK
AIHLEGQKGMGLTPEEPRKKLETKGAQTLPSQKHVVAPKILHNVSEDPSFVISQHIRKSW
ENPPPERSPASSPCQPIYECELASQAPEKQPDVRHHHLPKTKPLPSIDSLGPPPPKPSRP
PIVNLQAFQRQPAAVPKTQGEVTVEEGSLSPESKLAQGHSPTVAANKQDKPNHTSTFQAF
TVLQLLTSYWSKQVIWPSPEAEWEGAESFMAKSRDAGRSEEWGIDPVNLSPKRKHLK

>gi568815597f:56545388_56807710|GENSCAN_predicted_CDS_8|1254_bp
atggctccattagacattgtcctacttcctgcgaaagcaaaagatgacagaacacattta
caaaatctaatgcagtttagtgggaggaagaaggaccagcaggaagagcatggagcagga
ggacctattaaattcccagcaggtgtttctccaaagggtgacattggaggcacacagtca
actcaaattttggccaatgggaaacccctctcatccaaccacaagcagcgcacaccatac
tgttccagtagtgagtcccagcctcttcaacctcagaaaataaagttggctcagaagagt
gaaattccaaaatgttctaactccccagggcctctgggaaagtctactgtatgttctgca
acaagttcacagaaggcttctctgctgttagaggtgactcaatcaaatgttgagataatc
actaaggaaaaagtaatggtggccaatagcttcagaaacaaactctggaactgggagaag
gtttcatctcagaaaagtgaaatgtcttcagcccttctccttgccaactatggaagtaag
gccatccatctggaagggcaaaaaggcatggggcttactccagaggaacccaggaaaaag
ctggaaacaaaaggagcccagactcttccttcccagaagcacgtggtggcccccaaaata
ttacataacgtctctgaagatccctcttttgtaatttctcaacatatcagaaaaagctgg
gaaaacccacctcctgagaggagcccggcaagcagcccctgccagcccatctatgagtgt
gagcttgccagtcaggccccagaaaaacagccagatgtcaggcatcaccaccttcccaaa
acaaagccattgccctccatcgactccctgggtcctcctcccccaaagccttcaagacct
cccatcgtgaacctccaggcctttcagaggcagccagctgctgttcccaagactcagggg
gaagtgactgtggaagagggctccctgtctccagagagcaagctagcccaggggcactct
cctacagtcgctgctaacaagcaagacaagcccaatcacaccagtacttttcaagccttt
actgtgttgcagttgctgacatcttattggtccaagcaagtaatatggccaagcccagaa
gcagagtgggagggtgctgaaagtttcatggcaaaaagcagggatgcaggaaggagtgaa
gaatggggtattgatccagtcaacctatccccgaagaggaaacatttgaaatga
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