Result of FASTA (omim) for pF1KB4099
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4099, 452 aa
  1>>>pF1KB4099 452 - 452 aa - 452 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3968+/-0.000365; mu= 17.1104+/- 0.023
 mean_var=67.1721+/-13.522, 0's: 0 Z-trim(113.3): 162  B-trim: 291 in 1/51
 Lambda= 0.156488
 statistics sampled from 22472 (22646) to 22472 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.636), E-opt: 0.2 (0.266), width:  16
 Scan time:  7.130

The best scores are:                                      opt bits E(85289)
NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 3035 694.3 1.8e-199
NP_002054 (OMIM: 305990) glycine receptor subunit  ( 452) 3035 694.3 1.8e-199
NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 3029 692.9 4.5e-199
XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 3029 692.9 4.5e-199
XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2893 662.2 7.6e-190
XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2893 662.2 7.6e-190
XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 2893 662.2 7.6e-190
XP_016884917 (OMIM: 305990) PREDICTED: glycine rec ( 363) 2437 559.2 6.4e-159
XP_016884918 (OMIM: 305990) PREDICTED: glycine rec ( 363) 2437 559.2 6.4e-159
NP_001165413 (OMIM: 305990) glycine receptor subun ( 363) 2437 559.2 6.4e-159
NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 2408 552.7 7.2e-157
NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 2331 535.3 1.2e-151
XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 2330 535.1 1.5e-151
NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 2087 480.2 4.8e-135
NP_006520 (OMIM: 600421) glycine receptor subunit  ( 464) 2024 466.0 9.2e-131
XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 2011 463.1 6.5e-130
NP_001278929 (OMIM: 138491,149400) glycine recepto ( 366) 2008 462.4 9.2e-130
XP_011530569 (OMIM: 600421) PREDICTED: glycine rec ( 313) 1731 399.8 5.4e-111
NP_000815 (OMIM: 138492,614619) glycine receptor s ( 497) 1220 284.5 4.3e-76
NP_001159532 (OMIM: 138492,614619) glycine recepto ( 497) 1220 284.5 4.3e-76
XP_016863523 (OMIM: 138492,614619) PREDICTED: glyc ( 399) 1040 243.8 6.1e-64
NP_001159533 (OMIM: 138492,614619) glycine recepto ( 303) 1023 239.9 6.9e-63
XP_016863524 (OMIM: 138492,614619) PREDICTED: glyc ( 303) 1023 239.9 6.9e-63
XP_011530570 (OMIM: 600421) PREDICTED: glycine rec ( 269) 1003 235.4 1.4e-61
XP_016863471 (OMIM: 103780,137140) PREDICTED: gamm ( 451)  973 228.7 2.4e-59
XP_016863472 (OMIM: 103780,137140) PREDICTED: gamm ( 451)  973 228.7 2.4e-59
NP_001107647 (OMIM: 103780,137140) gamma-aminobuty ( 451)  973 228.7 2.4e-59
NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451)  973 228.7 2.4e-59
NP_068712 (OMIM: 137192,612269,617113) gamma-amino ( 473)  966 227.2 7.5e-59
NP_000803 (OMIM: 137190,617153) gamma-aminobutyric ( 474)  963 226.5 1.2e-58
NP_001121116 (OMIM: 137160,611136,615744) gamma-am ( 456)  961 226.0 1.6e-58
NP_001121117 (OMIM: 137160,611136,615744) gamma-am ( 456)  961 226.0 1.6e-58
NP_001121120 (OMIM: 137160,611136,615744) gamma-am ( 456)  961 226.0 1.6e-58
NP_001121115 (OMIM: 137160,611136,615744) gamma-am ( 456)  961 226.0 1.6e-58
NP_000797 (OMIM: 137160,611136,615744) gamma-amino ( 456)  961 226.0 1.6e-58
NP_000805 (OMIM: 137192,612269,617113) gamma-amino ( 473)  959 225.6 2.2e-58
NP_001158509 (OMIM: 137142) gamma-aminobutyric aci ( 462)  953 224.2 5.6e-58
XP_006720522 (OMIM: 137142) PREDICTED: gamma-amino ( 462)  953 224.2 5.6e-58
XP_005268315 (OMIM: 137142) PREDICTED: gamma-amino ( 462)  953 224.2 5.6e-58
NP_000801 (OMIM: 137142) gamma-aminobutyric acid r ( 462)  953 224.2 5.6e-58
NP_000804 (OMIM: 600232) gamma-aminobutyric acid r ( 474)  947 222.9 1.5e-57
NP_068711 (OMIM: 600232) gamma-aminobutyric acid r ( 512)  947 222.9 1.6e-57
NP_000806 (OMIM: 137163,613060) gamma-aminobutyric ( 452)  926 218.1 3.8e-56
XP_011539496 (OMIM: 137163,613060) PREDICTED: gamm ( 465)  926 218.1 3.9e-56
XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687)  926 218.2 5.4e-56
NP_055026 (OMIM: 602729) gamma-aminobutyric acid r ( 440)  922 217.2 6.9e-56
NP_000800 (OMIM: 137141) gamma-aminobutyric acid r ( 554)  907 213.9 8.8e-55
NP_001243632 (OMIM: 137161) gamma-aminobutyric aci ( 462)  906 213.6 8.8e-55
NP_002033 (OMIM: 137161) gamma-aminobutyric acid r ( 479)  906 213.6 9.1e-55
NP_001191195 (OMIM: 137141) gamma-aminobutyric aci ( 535)  904 213.2 1.4e-54


>>NP_001112357 (OMIM: 305990) glycine receptor subunit a  (452 aa)
 initn: 3035 init1: 3035 opt: 3035  Z-score: 3702.3  bits: 694.3 E(85289): 1.8e-199
Smith-Waterman score: 3035; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452)

               10        20        30        40        50        60
pF1KB4 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
              370       380       390       400       410       420

              430       440       450  
pF1KB4 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       ::::::::::::::::::::::::::::::::
NP_001 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              430       440       450  

>>NP_002054 (OMIM: 305990) glycine receptor subunit alph  (452 aa)
 initn: 3035 init1: 3035 opt: 3035  Z-score: 3702.3  bits: 694.3 E(85289): 1.8e-199
Smith-Waterman score: 3035; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452)

               10        20        30        40        50        60
pF1KB4 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
              370       380       390       400       410       420

              430       440       450  
pF1KB4 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       ::::::::::::::::::::::::::::::::
NP_002 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              430       440       450  

>>NP_001112358 (OMIM: 305990) glycine receptor subunit a  (452 aa)
 initn: 3029 init1: 3029 opt: 3029  Z-score: 3695.0  bits: 692.9 E(85289): 4.5e-199
Smith-Waterman score: 3029; 99.6% identity (100.0% similar) in 452 aa overlap (1-452:1-452)

               10        20        30        40        50        60
pF1KB4 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
       ::::::::::::::::::::::::..::::::::::::::::::::::::::::::::::
NP_001 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
              370       380       390       400       410       420

              430       440       450  
pF1KB4 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       ::::::::::::::::::::::::::::::::
NP_001 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              430       440       450  

>>XP_016884916 (OMIM: 305990) PREDICTED: glycine recepto  (452 aa)
 initn: 3029 init1: 3029 opt: 3029  Z-score: 3695.0  bits: 692.9 E(85289): 4.5e-199
Smith-Waterman score: 3029; 99.6% identity (100.0% similar) in 452 aa overlap (1-452:1-452)

               10        20        30        40        50        60
pF1KB4 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 RIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
       ::::::::::::::::::::::::..::::::::::::::::::::::::::::::::::
XP_016 RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDT
              370       380       390       400       410       420

              430       440       450  
pF1KB4 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       ::::::::::::::::::::::::::::::::
XP_016 ISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              430       440       450  

>>XP_011543798 (OMIM: 305990) PREDICTED: glycine recepto  (436 aa)
 initn: 2888 init1: 2888 opt: 2893  Z-score: 3529.3  bits: 662.2 E(85289): 7.6e-190
Smith-Waterman score: 2893; 99.5% identity (99.8% similar) in 433 aa overlap (21-452:4-436)

               10        20         30        40        50         
pF1KB4 MNRQLVNILTALFAFFLETNHFR-TAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                           :.: ::::::::::::::::::::::::::::::::::::
XP_011                  MNLHMRMTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                                10        20        30        40   

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
            50        60        70        80        90       100   

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
           110       120       130       140       150       160   

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
           170       180       190       200       210       220   

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
           230       240       250       260       270       280   

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
           290       300       310       320       330       340   

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
           350       360       370       380       390       400   

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
XP_011 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
           410       420       430      

>>XP_011543797 (OMIM: 305990) PREDICTED: glycine recepto  (436 aa)
 initn: 2888 init1: 2888 opt: 2893  Z-score: 3529.3  bits: 662.2 E(85289): 7.6e-190
Smith-Waterman score: 2893; 99.5% identity (99.8% similar) in 433 aa overlap (21-452:4-436)

               10        20         30        40        50         
pF1KB4 MNRQLVNILTALFAFFLETNHFR-TAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                           :.: ::::::::::::::::::::::::::::::::::::
XP_011                  MNLHMRMTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                                10        20        30        40   

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
            50        60        70        80        90       100   

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
           110       120       130       140       150       160   

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
           170       180       190       200       210       220   

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
           230       240       250       260       270       280   

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
           290       300       310       320       330       340   

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
           350       360       370       380       390       400   

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
XP_011 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
           410       420       430      

>>XP_006724550 (OMIM: 305990) PREDICTED: glycine recepto  (436 aa)
 initn: 2888 init1: 2888 opt: 2893  Z-score: 3529.3  bits: 662.2 E(85289): 7.6e-190
Smith-Waterman score: 2893; 99.5% identity (99.8% similar) in 433 aa overlap (21-452:4-436)

               10        20         30        40        50         
pF1KB4 MNRQLVNILTALFAFFLETNHFR-TAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                           :.: ::::::::::::::::::::::::::::::::::::
XP_006                  MNLHMRMTAFCKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYD
                                10        20        30        40   

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
            50        60        70        80        90       100   

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
           110       120       130       140       150       160   

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
           170       180       190       200       210       220   

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
           230       240       250       260       270       280   

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
           290       300       310       320       330       340   

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
           350       360       370       380       390       400   

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
XP_006 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
           410       420       430      

>>XP_016884917 (OMIM: 305990) PREDICTED: glycine recepto  (363 aa)
 initn: 2437 init1: 2437 opt: 2437  Z-score: 2974.1  bits: 559.2 E(85289): 6.4e-159
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 363 aa overlap (90-452:1-363)

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                     ::::::::::::::::::::::::::::::
XP_016                               MDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                             10        20        30

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
               40        50        60        70        80        90

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
              100       110       120       130       140       150

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
              160       170       180       190       200       210

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
              220       230       240       250       260       270

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
              280       290       300       310       320       330

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
XP_016 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              340       350       360   

>>XP_016884918 (OMIM: 305990) PREDICTED: glycine recepto  (363 aa)
 initn: 2437 init1: 2437 opt: 2437  Z-score: 2974.1  bits: 559.2 E(85289): 6.4e-159
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 363 aa overlap (90-452:1-363)

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                     ::::::::::::::::::::::::::::::
XP_016                               MDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                             10        20        30

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
               40        50        60        70        80        90

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
              100       110       120       130       140       150

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
              160       170       180       190       200       210

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
              220       230       240       250       260       270

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
              280       290       300       310       320       330

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
XP_016 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              340       350       360   

>>NP_001165413 (OMIM: 305990) glycine receptor subunit a  (363 aa)
 initn: 2437 init1: 2437 opt: 2437  Z-score: 2974.1  bits: 559.2 E(85289): 6.4e-159
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 363 aa overlap (90-452:1-363)

      60        70        80        90       100       110         
pF1KB4 ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                     ::::::::::::::::::::::::::::::
NP_001                               MDYRVNIFLRQQWNDSRLAYSEYPDDSLDL
                                             10        20        30

     120       130       140       150       160       170         
pF1KB4 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNF
               40        50        60        70        80        90

     180       190       200       210       220       230         
pF1KB4 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTG
              100       110       120       130       140       150

     240       250       260       270       280       290         
pF1KB4 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTT
              160       170       180       190       200       210

     300       310       320       330       340       350         
pF1KB4 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQN
              220       230       240       250       260       270

     360       370       380       390       400       410         
pF1KB4 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEEDVTRESRFNFSGYGMGHCLQVKDGTAVKATPANPLPQPPKDGDAIKKKFVDRAKRID
              280       290       300       310       320       330

     420       430       440       450  
pF1KB4 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
       :::::::::::::::::::::::::::::::::
NP_001 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK
              340       350       360   




452 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 05:38:07 2016 done: Sat Nov  5 05:38:08 2016
 Total Scan time:  7.130 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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