GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:26:46

Sequence gi568815594r:98781031_99001983 : 220953 bp : 39.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    370    365    6                               1.05
 1.03 Term -   3795   3596  200  1  2   81   42   107 0.394   1.98
 1.02 Intr -   5364   5297   68  2  2   91   68    68 0.484   2.73
 1.01 Init -   8651   8551  101  2  2   82   95    58 0.970   5.70
 1.00 Prom -  10887  10848   40                              -5.15

 2.04 PlyA -  12222  12217    6                               1.05
 2.03 Term -  20277  20215   63  0  0   99   54    99 0.182   4.51
 2.02 Intr -  28205  28174   32  0  2  101   67    26 0.021  -1.27
 2.01 Init -  32727  32556  172  0  1   70   15   157 0.270   6.25
 2.00 Prom -  33858  33819   40                              -6.95

 3.00 Prom +  36125  36164   40                              -5.65
 3.01 Init +  39324  39385   62  2  2   90   91    84 0.976   9.67
 3.02 Intr +  42654  42772  119  0  2   10  100    34 0.052  -4.01
 3.03 Term +  57209  57435  227  0  2   78   47   152 0.293   6.06
 3.04 PlyA +  57803  57808    6                               1.05

 4.16 PlyA -  57943  57938    6                               1.05
 4.15 Term -  61518  61299  220  2  1   80   39   103 0.003   0.13
 4.14 Intr -  64444  64373   72  0  0  102   62    40 0.005   0.40
 4.13 Intr -  67734  67641   94  1  1   57   57    86 0.019   0.50
 4.12 Intr -  68153  68089   65  1  2   51  106    57 0.041   1.24
 4.11 Intr -  90799  90524  276  0  0   96  116    55 0.614   4.81
 4.10 Intr - 100112 100011  102  1  0  127   58    60 0.702   5.27
 4.09 Intr - 104031 103892  140  0  2   43  110   159 0.999  11.94
 4.08 Intr - 106162 106049  114  1  0   87   70   108 0.988   8.62
 4.07 Intr - 106922 106859   64  1  1   76   91    -9 0.886  -4.00
 4.06 Intr - 110302 110207   96  0  0   85   88    40 0.704   1.91
 4.05 Intr - 120952 120846  107  1  2   86  115   102 0.972  10.79
 4.04 Intr - 147613 147524   90  1  0   66   59    72 0.283   1.37
 4.03 Intr - 148205 148065  141  2  0   51  117    68 0.572   5.63
 4.02 Intr - 148894 148736  159  1  0   17   51   146 0.512   3.06
 4.01 Init - 165549 165208  342  0  0   28   84   252 0.127  16.08
 4.00 Prom - 166188 166149   40                              -4.65

 5.00 Prom + 171690 171729   40                              -8.75
 5.01 Sngl + 174970 175266  297  0  0   10   53   338 0.878  17.99
 5.02 PlyA + 175601 175606    6                               1.05

 6.03 PlyA - 175788 175783    6                               1.05
 6.02 Term - 195879 195770  110  1  2   79   53   133 0.968   6.59
 6.01 Init - 211761 211389  373  0  1   94   86   121 0.615   9.85
 6.00 Prom - 211830 211791   40                             -12.43

 7.03 PlyA - 211910 211905    6                               1.05
 7.02 Term - 212489 212333  157  1  1   63   37   181 0.608   6.92
 7.01 Init - 213001 212808  194  1  2   78   28   309 0.611  20.39
 7.00 Prom - 213161 213122   40                              -7.35

 8.05 PlyA - 213173 213168    6                               1.05
 8.04 Term - 213765 213738   28  2  1   89   43     0 0.376  -7.83
 8.03 Intr - 214377 214077  301  1  1   24   64   281 0.523  14.17
 8.02 Intr - 215274 215063  212  2  2   34   10   207 0.417   5.13
 8.01 Intr - 215447 215329  119  2  2   54   70    92 0.378   2.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  24952  25299  348  0  0   71   35   167 0.828   5.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_1|122_aa
MTFASDQFTFALTELLPPLGSHRCDCTLSSGLYCTSIAPNNKCLSSSCLPAVQGTGATKS
EVSYNVQRHRNVKHRVMLREILVSGASMNELRSSGRSGQKCWKGNNQCGFVYRKLMAGFD
FS

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_1|369_bp
atgacctttgcttctgaccagttcacttttgctctgactgaacttcttccacctcttggt
agccatcgctgtgattgtactttgtcttcaggattgtactgcacatccattgcaccaaac
aacaagtgtctgagctcctcgtgtcttccagctgttcagggcactggcgccactaaatct
gaagtctcatacaacgttcaaaggcacaggaatgtgaaacatcgcgttatgctcagggaa
atccttgtgagtggagcatcgatgaatgagttaagaagcagtgggaggtcgggccagaaa
tgttggaaaggcaacaatcagtgtggcttcgtgtacaggaaactcatggctgggtttgat
ttctcataa

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_2|88_aa
MKEWTVPLSNRKVRKEKGEEEREKDGLQQGGEGEMLREARERPTRYSVAESKVQAAALSG
LDGSTSTQGVGAAVAGDSSHRGRSRLIS

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_2|267_bp
atgaaagagtggacagttcccctgagtaacagaaaagttagaaaagagaaaggagaggaa
gagagagaaaaggatggcctgcagcagggtggggaaggtgaaatgctcagggaggccaga
gaaagacccacccgttacagcgttgctgaatcaaaagttcaggcggctgctttgagtgga
ttagatggttctacatcaactcagggagtcggagcagcagtggccggtgacagttcacat
cgtggccgctccaggctcatcagttga

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_3|135_aa
MEVTKNKEGLRNCHRREEPDRLITQLETSHPPCVCVVSPLQRLLPVILSKFGAYLKVSLA
NYRNDVRQKAIFFVEFKMGRKAEETTCNINSASGPELLMNVQCSGGSRSLCNNNEPFLDW
IVTCDKKWILYNNQQ

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_3|408_bp
atggaggtcaccaaaaacaaggaaggtctaagaaactgtcatagacgagaggagcctgac
aggctcatcacacaactggaaacttctcaccctccatgtgtctgtgtagtgtcacctctt
cagaggcttctcccagtcattcttagtaaatttggtgcctatctgaaggtatctttagcc
aactacagaaatgatgttagacaaaaagcaattttcttcgttgagttcaaaatgggtcgt
aaagcagaggagacaacttgcaacatcaacagtgcatctggcccagaactgctaatgaac
gtacagtgcagtggtggttccagaagtttatgcaacaacaatgaaccatttctcgattgg
attgtgacatgtgacaaaaagtggattttatacaacaaccagcaatga

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_4|693_aa
MSVHCVIEVNKKTSPLSRENIWLLEKAEACEIAWLHGTIQTHQEKPRVQNLVILEESIAL
LGLQDKDIRCQVTTAELGLEKKVTRADKKAEGKSHHPSQTKRVPSQGEKEEKQKAISVHV
KAEYWNGCTELPNNFYRHARFSPEVLISGFGTVKAVVPPPRPAGGKRVPPGPNGHIRHVA
RSWPIRFESHFFPLTPPSGAVVRSDRSKMATVEPNPSSGARVRGARTSSLDRWTGELVGE
CCRRETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRL
ISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQR
RSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRV
YKERLGLPPKIVIGYQSHADTATKSGSTTKNRKQPRKPGFSQSGKYWNLCTVIIMIVGVL
NYKNDSRWFLNHPIKLYSLCRTVLVFHALPKAACSVDLFVHCLIAGSKFKNEEKGECEKI
LNQRDYTEETPNPKEIDYNTDWLTLEGISRADGTAGKDSFTTNKQLPELLIQCHCNGNRL
TAYSCEPTSDLWLQLRRNKDGSHIQVTLMQDVSSLGLGQLCPCGFAGYSLPPSCFHGLVL
NVCGFSMHTVQAVVGSTILGSGGRWPSSHSSTR

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_4|2082_bp
atgagtgtacactgtgtcatagaagtaaacaagaaaaccagtcccttgagcagggagaat
atatggctcttagaaaaagcagaagcatgtgaaattgcctggttacatggaacaatccag
acacatcaagaaaagccaagagtacagaatctagttatattggaggaaagcattgctctc
ctaggccttcaagacaaagatattcggtgtcaggtcacaacagcagagttaggactggag
aaaaaagttacaagagctgacaaaaaggctgaaggcaagagtcatcaccccagccaaaca
aaaagagtaccttctcaaggagaaaaagaggagaagcagaaggctatttccgtgcacgta
aaagcggaatattggaacggttgcacagaacttccaaataatttttaccgccacgcaaga
tttagccctgaggtcttaatctcaggatttgggacagtaaaagctgtcgtccctccccct
cgtccagccggtggcaagcgggtgccgccagggccaaacggacatatccgtcacgtggcc
agaagctggccaatccggtttgaatctcatttttttcctcttacccccccttctggagcg
gttgtgcgatcagatcgatctaagatggcgactgtcgaaccgaaccccagctccggggct
cgggtgcggggcgcgcgcacgtcttccttagaccggtggactggggagctggtgggcgag
tgttgccggagggaaaccacccctactcctaatcccccgactacagaagaggagaaaacg
gaatctaatcaggaggttgctaacccagaacactatattaaacatcccctacagaacaga
tgggcactctggttttttaaaaatgataaaagcaaaacttggcaagcaaacctgcggctg
atctccaagtttgatactgttgaagacttttgggctctgtacaaccatatccagttgtct
agtaatttaatgcctggctgtgactactcactttttaaggatggtattgagcctatgtgg
gaagatgagaaaaacaaacggggaggacgatggctaattacattgaacaaacagcagaga
cgaagtgacctcgatcgcttttggctagagacacttctgtgccttattggagaatctttt
gatgactacagtgatgatgtatgtggcgctgttgttaatgttagagctaaaggtgataag
atagcaatatggactactgaatgtgaaaacagagaagctgttacacatatagggagggta
tacaaggaaaggttaggacttcctccaaagatagtgattggttatcagtcccacgcagac
acagctactaagagcggctccaccactaaaaatagaaagcagccaaggaaaccagggttc
tctcaaagtggaaaatactggaacttatgtactgttatcataatgatagttggtgttttg
aattataagaatgattccaggtggtttctaaatcatccaataaagctgtattcactctgt
aggactgtcttagtatttcatgcattacctaaagcagcatgtagtgtggatttatttgtt
cattgccttattgcaggaagtaaatttaaaaatgaagaaaagggagaatgtgaaaaaata
ttaaaccaaagggactatactgaggagacccccaacccaaaggaaatagactacaacact
gattggctgactttggagggaatctcaagagctgatgggactgctggaaaagattccttc
actaccaacaagcagctgcctgaacttttgattcagtgtcactgtaatggcaatagactg
actgcctattcctgtgaaccgacaagtgatctctggctgcagctcagaagaaacaaggac
gggtctcacatccaggtcacgctgatgcaagatgtgagttcccttggtcttgggcagctc
tgcccctgtggctttgcagggtacagcctccctcccagctgctttcacgggctggtattg
aatgtctgtggcttttccatgcacacagtgcaagctgttgttggatctaccattctgggg
tctggaggacgatggccctcttctcacagctccactaggtag

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_5|98_aa
MSDKRGFENVELGVIQGKKKVPRRAILFVSDDTMKEYSTDEDEVDGLERKDVLPTLDPEE
EGGGGGGVKEEEEKNRMSTEAERHYQQRRRRKRRRMSV

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_5|297_bp
atgagtgacaaaagaggctttgaaaatgtagaactgggagtgatacaaggaaagaagaaa
gtcccaaggagagccatcctctttgttagtgatgacacaatgaaggaatacagcacagat
gaagatgaagttgatggcctagagaggaaagatgttttgcctactcttgacccagaagaa
gaaggaggtggaggaggtggagtgaaggaagaggaggagaaaaataggatgtctacagaa
gcagaaagacattaccaacagaggaggaggaggaagaggaggagaatgtctgtatga

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_6|160_aa
MKVCSFIPEAIETTNPPGRTSNSRSAALRAVTLTVKVCSFTPEPARPGTHQKEETLNTSE
HQKEQTPGTMPLRTVTLTVRVHGFILEVSETKNPPIPDTTAHCSLNILSSSDVPASASGL
VRTTGNNQTCEYHPEAAEQASKGRVIYLSTSPIRQGDTRP

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_6|483_bp
atgaaggtctgcagcttcattcctgaagccatcgagaccaccaacccacccgggagaaca
agcaactccagaagtgccgccttaagagctgtaacactcaccgtgaaggtctgcagcttc
actcctgagccagcgagaccaggaacccaccagaaggaagaaactctgaacacatctgaa
catcagaaggaacaaactccaggcacgatgcctttaagaactgtaacactcacggtgagg
gtccatggcttcattcttgaagtcagtgagaccaagaacccaccaattccggacacaaca
gctcactgcagcctcaacatcctgagctcaagtgatgttcctgcctcagcctctggacta
gttaggactacaggaaacaatcagacgtgtgagtaccatccagaagcagcagaacaagct
agtaaaggaagggtaatatacctctccacgtcaccaattcggcaaggggatactaggccc
tga

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_7|116_aa
MLAALAALACSRCLLASAPILAVLEEPFSRRCTVGALLWAGRGQRRFPQLVVGVVAEARV
ATAAAAPGPMDHPRAQECGLTARDWQTAPPAAPVREPLGVASWAPESSGDLENLYV

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_7|351_bp
atgctggcagccctcgcagcccttgcttgctctcggtgcctcctggcctcagctcccatt
ctggccgtgcttgaggagcccttcagccgccgctgcaccgtgggagcccttctctgggct
ggccgaggccagagacggttccctcagcttgtggtaggtgtggtggcagaggcacgggtg
gcaactgcggctgcggcacccggtcccatggaccacccaagggctcaggagtgtgggctt
acagctcgggactggcagacagctccacctgcggccccagtgcgggaaccactgggtgta
gccagctgggctcctgagtctagtggggacttggagaacctttatgtctag

>gi568815594r:98781031_99001983|GENSCAN_predicted_peptide_8|219_aa
LLKCQSTVVKHKEVGLELASVPPLCDSDGPRATHLSEPGSAQTRAPPVLRMWRLATLGLP
SFPAPLPASGSPHTWRPPPQRGEPAPERGGLARPRDPAQPASAPAHMAAAAENATCRRLT
VRSRPLAAHSLCLQSDKTVVFTDEHPGALIIPDTRRRLERALRSSALDSPAAPWRTVPWV
KFCFSLTLSGLRPKDHRSFTERRAIELSTGREERKTNIY

>gi568815594r:98781031_99001983|GENSCAN_predicted_CDS_8|660_bp
ttgcttaagtgtcaaagcacggtagtaaagcacaaagaagtggggctggagctagctagc
gttcctcctctctgcgactccgacggtcctcgggccacccatctctcagagcccggcagc
gcccagacccgagccccgccggtgctgcggatgtggaggctcgcgacgctcgggctgccc
tccttcccggcgccgctacctgcctccggcagcccgcacacctggcggcccccgccccag
cgcggggaaccggccccagaacgcggaggtctagcgcggccacgcgaccccgcacagccc
gcttccgccccagcccacatggccgcggcggcagagaacgcgacctgccggcgcctgacg
gtgaggagccgccctctcgcggcgcactctctgtgcctacagtcagataagacagtcgtc
ttcactgacgaacacccaggagccctgatcatccccgacacccgcaggaggctagagagg
gcgctgcgctcctctgcgttggattcccccgccgctccttggagaacagtcccttgggtt
aagttctgtttctcactgacattgtcgggtctgaggcctaaggaccaccgctcattcaca
gaaaggagagccatagagctgtcaacgggacgggaagagcgaaaaactaacatttactga