Result of FASTA (nr) for
pF1KB7668
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7668, 402 aa
1>>>pF1KB7668 402 - 402 aa - 402 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7799+/-0.000185; mu= 5.5343+/- 0.010
mean_var=125.1296+/-23.532, 0's: 30 Z-trim(122.8): 192 B-trim: 0 in 0/65
Lambda= 0.114655
statistics sampled from 60000 (161743) to 8665505 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.338), width: 16
Scan time: 750.960
The best scores are: opt bits E(25779625)
gi|11641283|ref|NP_071758.1| LIM/homeobox protein ( 402) 2808 475.5 2.9e-131
gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/ho ( 402) 2803 474.7 5.2e-131
gi|156120769|ref|NP_001095531.1| LIM/homeobox prot ( 402) 2791 472.7 2.1e-130
gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/ho ( 402) 2787 472.1 3.2e-130
gi|472382093|ref|XP_004410433.1| PREDICTED: LIM/ho ( 402) 2783 471.4 5.1e-130
gi|466066564|ref|XP_004281512.1| PREDICTED: LIM/ho ( 402) 2782 471.2 5.8e-130
gi|478511472|ref|XP_004430007.1| PREDICTED: LIM/ho ( 402) 2782 471.2 5.8e-130
gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/ho ( 402) 2781 471.1 6.5e-130
gi|6678690|ref|NP_032525.1| LIM/homeobox protein L ( 402) 2779 470.8 8.1e-130
gi|431914229|gb|ELK15487.1| LIM/homeobox protein L ( 402) 2778 470.6 9.1e-130
gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QU ( 402) 2772 469.6 1.8e-129
gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeo ( 402) 2769 469.1 2.6e-129
gi|488528814|ref|XP_004456202.1| PREDICTED: LIM/ho ( 402) 2767 468.8 3.2e-129
gi|471383227|ref|XP_004379108.1| PREDICTED: LIM/ho ( 402) 2766 468.6 3.6e-129
gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/ho ( 402) 2756 466.9 1.1e-128
gi|291407015|ref|XP_002719805.1| PREDICTED: LIM ho ( 402) 2748 465.6 2.8e-128
gi|351694748|gb|EHA97666.1| LIM/homeobox protein L ( 402) 2716 460.3 1.1e-126
gi|465951484|gb|EMP24392.1| LIM/homeobox protein L ( 401) 2596 440.5 1e-120
gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/ho ( 402) 2595 440.3 1.2e-120
gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/ho ( 400) 2578 437.5 8.2e-120
gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QU ( 403) 2577 437.3 9.3e-120
gi|440898273|gb|ELR49802.1| LIM/homeobox protein L ( 376) 2560 434.5 6.1e-119
gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QU ( 404) 2557 434.0 9.2e-119
gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xe ( 402) 2440 414.7 6.2e-113
gi|281343471|gb|EFB19055.1| hypothetical protein P ( 354) 2430 413.0 1.7e-112
gi|147902022|ref|NP_001084038.1| LIM/homeobox prot ( 402) 2422 411.7 4.9e-112
gi|52354701|gb|AAH82847.1| Unknown (protein for MG ( 402) 2404 408.7 3.8e-111
gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/ho ( 396) 2277 387.7 7.9e-105
gi|499032479|ref|XP_004566939.1| PREDICTED: LIM/ho ( 396) 2268 386.2 2.2e-104
gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/ho ( 396) 2254 383.9 1.1e-103
gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/ho ( 396) 2226 379.3 2.8e-102
gi|18858977|ref|NP_571293.1| LIM/homeobox protein ( 399) 2206 376.0 2.7e-101
gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/ho ( 385) 2159 368.2 5.8e-99
gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QU ( 405) 2126 362.7 2.7e-97
gi|470594518|ref|XP_004310387.1| PREDICTED: LIM/ho ( 406) 2126 362.7 2.7e-97
gi|466018708|ref|XP_004271769.1| PREDICTED: LIM/ho ( 406) 2125 362.6 3e-97
gi|157428018|ref|NP_001098917.1| LIM/homeobox prot ( 406) 2123 362.2 3.8e-97
gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/ho ( 406) 2122 362.1 4.2e-97
gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/ho ( 406) 2122 362.1 4.2e-97
gi|30410785|ref|NP_005559.2| LIM/homeobox protein ( 406) 2122 362.1 4.2e-97
gi|76573889|ref|NP_001029088.1| LIM/homeobox prote ( 406) 2120 361.7 5.3e-97
gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/ho ( 406) 2120 361.7 5.3e-97
gi|431890885|gb|ELK01764.1| LIM/homeobox protein L ( 406) 2119 361.6 6e-97
gi|6678688|ref|NP_032524.1| LIM/homeobox protein L ( 406) 2116 361.1 8.4e-97
gi|18858973|ref|NP_571291.1| LIM/homeobox protein ( 405) 2115 360.9 9.5e-97
gi|74187870|dbj|BAE24561.1| unnamed protein produc ( 406) 2115 360.9 9.5e-97
gi|355786560|gb|EHH66743.1| hypothetical protein E ( 306) 2111 360.2 1.2e-96
gi|45382269|ref|NP_990744.1| LIM/homeobox protein ( 406) 2109 359.9 1.9e-96
gi|471380192|ref|XP_004377892.1| PREDICTED: LIM/ho ( 406) 2108 359.8 2.1e-96
gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/ho ( 407) 2108 359.8 2.1e-96
>>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 (402 aa)
initn: 2808 init1: 2808 opt: 2808 Z-score: 2522.1 bits: 475.5 E(25779625): 2.9e-131
Smith-Waterman score: 2808; 100.0% identity (100.0% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|116 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeob (402 aa)
initn: 2803 init1: 2803 opt: 2803 Z-score: 2517.6 bits: 474.7 E(25779625): 5.2e-131
Smith-Waterman score: 2803; 99.8% identity (100.0% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|109 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|109 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein (402 aa)
initn: 2791 init1: 2791 opt: 2791 Z-score: 2506.9 bits: 472.7 E(25779625): 2.1e-130
Smith-Waterman score: 2791; 99.0% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|156 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|156 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|156 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::.
gi|156 PSQAQSPADSSFLAASGPGSTPLGALEPPIAGPHAADNPRFTDMISHPDTPSPEPGLPGS
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|156 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeob (402 aa)
initn: 2787 init1: 2787 opt: 2787 Z-score: 2503.3 bits: 472.1 E(25779625): 3.2e-130
Smith-Waterman score: 2787; 99.0% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|344 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
:::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::
gi|344 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|344 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|344 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|472382093|ref|XP_004410433.1| PREDICTED: LIM/homeob (402 aa)
initn: 2783 init1: 2783 opt: 2783 Z-score: 2499.7 bits: 471.4 E(25779625): 5.1e-130
Smith-Waterman score: 2783; 98.8% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|472 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|472 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|472 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|472 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|472 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|472 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
:::.:::::::::::::::::.::::::::::::::::::::
gi|472 LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|466066564|ref|XP_004281512.1| PREDICTED: LIM/homeob (402 aa)
initn: 2782 init1: 2782 opt: 2782 Z-score: 2498.8 bits: 471.2 E(25779625): 5.8e-130
Smith-Waterman score: 2782; 98.8% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|466 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|466 GTKCAGCAQGISPSDLVRKARGKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|466 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|466 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|466 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::.
gi|466 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHATDNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|466 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|478511472|ref|XP_004430007.1| PREDICTED: LIM/homeob (402 aa)
initn: 2782 init1: 2782 opt: 2782 Z-score: 2498.8 bits: 471.2 E(25779625): 5.8e-130
Smith-Waterman score: 2782; 98.8% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|478 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|478 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|478 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|478 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|478 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::.:::
gi|478 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNETAVW
370 380 390 400
>>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeob (402 aa)
initn: 2781 init1: 2781 opt: 2781 Z-score: 2497.9 bits: 471.1 E(25779625): 6.5e-130
Smith-Waterman score: 2781; 99.0% identity (99.5% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|395 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|395 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|395 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|395 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
gi|395 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::.
gi|395 PSQAQSPADSSFLAASGAGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|395 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 (402 aa)
initn: 2779 init1: 2779 opt: 2779 Z-score: 2496.1 bits: 470.8 E(25779625): 8.1e-130
Smith-Waterman score: 2779; 98.8% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|667 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|667 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|667 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|667 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
:::::::::::::::::::::::::::::::::::::::::::.::::::.:::::::::
gi|667 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::.
gi|667 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
::::::::::::::::::::::::::::::::::::::::::
gi|667 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
370 380 390 400
>>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 (402 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2495.2 bits: 470.6 E(25779625): 9.1e-130
Smith-Waterman score: 2778; 98.5% identity (99.8% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KB7 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|431 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|431 GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::
gi|431 SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|431 RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
:::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::
gi|431 LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFAHGP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGT
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
gi|431 PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
310 320 330 340 350 360
370 380 390 400
pF1KB7 LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
:::.:::::::::::::::::.::::::::::::::::::::
gi|431 LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
370 380 390 400
402 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Sat May 25 00:32:17 2013 done: Sat May 25 00:34:15 2013
Total Scan time: 750.960 Total Display time: -1.400
Function used was FASTA [36.3.4 Apr, 2011]