Result of FASTA (ccds) for
pF1KE0265
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0265, 130 aa
1>>>pF1KE0265 130 - 130 aa - 130 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.7082+/-0.000736; mu= 13.9808+/- 0.045
mean_var=56.9351+/-11.490, 0's: 0 Z-trim(109.0): 39 B-trim: 373 in 2/48
Lambda= 0.169975
statistics sampled from 10526 (10569) to 10526 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.325), width: 16
Scan time: 1.520
The best scores are: opt bits E(32554)
CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 ( 130) 826 210.0 3.3e-55
CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 ( 130) 826 210.0 3.3e-55
CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 ( 130) 819 208.3 1.1e-54
CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 ( 130) 815 207.3 2.2e-54
CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1 ( 130) 815 207.3 2.2e-54
CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6 ( 130) 812 206.6 3.6e-54
CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6 ( 130) 812 206.6 3.6e-54
CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6 ( 128) 805 204.9 1.2e-53
CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6 ( 128) 800 203.6 2.7e-53
CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 ( 129) 796 202.6 5.4e-53
CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1 ( 130) 783 199.5 5e-52
CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6 ( 131) 780 198.7 8.3e-52
CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12 ( 129) 773 197.0 2.7e-51
CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11 ( 143) 738 188.5 1.1e-48
CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5 ( 369) 500 130.4 8.9e-31
CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5 ( 371) 500 130.4 9e-31
CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5 ( 372) 500 130.4 9e-31
CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10 ( 372) 490 127.9 4.9e-30
CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7 ( 128) 459 120.0 4.1e-28
CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4 ( 128) 455 119.0 8e-28
CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7 ( 114) 413 108.7 9.2e-25
CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7 ( 102) 361 95.9 5.8e-21
CCDS35464.1 H2AFB3 gene_id:83740|Hs108|chrX ( 115) 300 81.0 2e-16
CCDS35461.1 H2AFB2 gene_id:474381|Hs108|chrX ( 115) 300 81.0 2e-16
CCDS35458.1 H2AFB1 gene_id:474382|Hs108|chrX ( 115) 291 78.8 9.4e-16
CCDS47581.1 H2AFV gene_id:94239|Hs108|chr7 ( 66) 241 66.4 3e-12
CCDS5498.1 H2AFV gene_id:94239|Hs108|chr7 ( 90) 224 62.3 6.8e-11
>>CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 (130 aa)
initn: 826 init1: 826 opt: 826 Z-score: 1104.6 bits: 210.0 E(32554): 3.3e-55
Smith-Waterman score: 826; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS93 TESHHKAKGK
130
>>CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 (130 aa)
initn: 826 init1: 826 opt: 826 Z-score: 1104.6 bits: 210.0 E(32554): 3.3e-55
Smith-Waterman score: 826; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS30 TESHHKAKGK
130
>>CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS45 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS45 TESHHKAKGK
130
>>CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 (130 aa)
initn: 819 init1: 819 opt: 819 Z-score: 1095.3 bits: 208.3 E(32554): 1.1e-54
Smith-Waterman score: 819; 98.5% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::::
CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS46 TESHHKAKGK
130
>>CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 (130 aa)
initn: 815 init1: 815 opt: 815 Z-score: 1090.0 bits: 207.3 E(32554): 2.2e-54
Smith-Waterman score: 815; 97.7% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::.:::::::::::::::::::::::.::::::::::.::::::::
CCDS45 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS45 TESHHKAKGK
130
>>CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1 (130 aa)
initn: 815 init1: 815 opt: 815 Z-score: 1090.0 bits: 207.3 E(32554): 2.2e-54
Smith-Waterman score: 815; 97.7% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
::::::::::::::::::::::::::::::::::::::::.::::::::::.::::::::
CCDS15 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
CCDS15 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
70 80 90 100 110 120
130
pF1KE0 TESHHKAKGK
::::::::::
CCDS15 TESHHKAKGK
130
130 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 18:21:06 2016 done: Thu Nov 3 18:21:06 2016
Total Scan time: 1.520 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]