Result of FASTA (ccds) for pF1KE0151
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0151, 119 aa
  1>>>pF1KE0151 119 - 119 aa - 119 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.5872+/-0.000499; mu= 14.6061+/- 0.030
 mean_var=54.0586+/-10.978, 0's: 0 Z-trim(114.3): 7  B-trim: 189 in 1/50
 Lambda= 0.174438
 statistics sampled from 14869 (14876) to 14869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.827), E-opt: 0.2 (0.457), width:  16
 Scan time:  1.720

The best scores are:                                      opt bits E(32554)
CCDS8257.1 NDUFC2 gene_id:4718|Hs108|chr11         ( 119)  818 212.4 5.2e-56
CCDS55780.1 KCTD14 gene_id:100532726|Hs108|chr11   ( 114)  714 186.2 3.8e-48
CCDS73354.1 KCTD14 gene_id:100532726|Hs108|chr11   ( 134)  706 184.3 1.8e-47
CCDS55781.1 NDUFC2 gene_id:4718|Hs108|chr11        (  88)  522 137.8 1.1e-33
CCDS55779.1 NDUFC2 gene_id:4718|Hs108|chr11        (  96)  399 106.9 2.4e-24
CCDS73353.1 KCTD14 gene_id:100532726|Hs108|chr11   (  86)  382 102.6 4.3e-23


>>CCDS8257.1 NDUFC2 gene_id:4718|Hs108|chr11              (119 aa)
 initn: 818 init1: 818 opt: 818  Z-score: 1119.0  bits: 212.4 E(32554): 5.2e-56
Smith-Waterman score: 818; 99.2% identity (100.0% similar) in 119 aa overlap (1-119:1-119)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS82 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
               10        20        30        40        50        60

               70        80        90       100       110         
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
               70        80        90       100       110         

>>CCDS55780.1 KCTD14 gene_id:100532726|Hs108|chr11        (114 aa)
 initn: 714 init1: 714 opt: 714  Z-score: 977.8  bits: 186.2 E(32554): 3.8e-48
Smith-Waterman score: 714; 99.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS55 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
               10        20        30        40        50        60

               70        80        90       100       110         
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
       ::::::::::::::::::::::::::::::::::::::::::::               
CCDS55 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDVYCCGAERRG     
               70        80        90       100       110         

>>CCDS73354.1 KCTD14 gene_id:100532726|Hs108|chr11        (134 aa)
 initn: 706 init1: 706 opt: 706  Z-score: 965.9  bits: 184.3 E(32554): 1.8e-47
Smith-Waterman score: 706; 99.0% identity (100.0% similar) in 103 aa overlap (1-103:1-103)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS73 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR 
       :::::::::::::::::::::::::::::::::::::::::::                 
CCDS73 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEGGDIGLCCLSPGSLSDT
               70        80        90       100       110       120

CCDS73 PAVFAVGSSAATTH
              130    

>>CCDS55781.1 NDUFC2 gene_id:4718|Hs108|chr11             (88 aa)
 initn: 540 init1: 522 opt: 522  Z-score: 718.3  bits: 137.8 E(32554): 1.1e-33
Smith-Waterman score: 522; 96.2% identity (97.5% similar) in 80 aa overlap (1-80:1-80)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS55 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
               10        20        30        40        50        60

               70        80        90       100       110         
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
       :::::::::::::::: : :                                       
CCDS55 LLYITAFFFAGYYLVKLEAYANLYVDTL                               
               70        80                                       

>>CCDS55779.1 NDUFC2 gene_id:4718|Hs108|chr11             (96 aa)
 initn: 396 init1: 374 opt: 399  Z-score: 550.4  bits: 106.9 E(32554): 2.4e-24
Smith-Waterman score: 610; 79.8% identity (80.7% similar) in 119 aa overlap (1-119:1-96)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.:::::::::     
CCDS55 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATA-----
               10        20        30        40        50          

               70        80        90       100       110         
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
                         :::::::::::::::::::::::::::::::::::::::::
CCDS55 ------------------DYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
                            60        70        80        90      

>>CCDS73353.1 KCTD14 gene_id:100532726|Hs108|chr11        (86 aa)
 initn: 382 init1: 382 opt: 382  Z-score: 528.0  bits: 102.6 E(32554): 4.3e-23
Smith-Waterman score: 382; 98.2% identity (100.0% similar) in 56 aa overlap (1-56:1-56)

               10        20        30        40        50        60
pF1KE0 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNVIRRRPIATAGLHRQ
       :::::::::::::::::::::::::::::::::::::::::::::.::::::::::    
CCDS73 MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGGDIG
               10        20        30        40        50        60

               70        80        90       100       110         
pF1KE0 LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEDKKTYGEIFEKFHPIR
                                                                  
CCDS73 LCCLSPGSLSDTPAVFAVGSSAATTH                                 
               70        80                                       




119 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 00:08:31 2016 done: Fri Nov  4 00:08:31 2016
 Total Scan time:  1.720 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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