Result of FASTA (omim) for pF1KE0107
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0107, 283 aa
  1>>>pF1KE0107 283 - 283 aa - 283 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3398+/-0.000465; mu= 10.5997+/- 0.028
 mean_var=147.1811+/-30.318, 0's: 0 Z-trim(113.1): 394  B-trim: 34 in 1/51
 Lambda= 0.105718
 statistics sampled from 21800 (22290) to 21800 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.261), width:  16
 Scan time:  6.880

The best scores are:                                      opt bits E(85289)
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212) 1278 206.8 2.9e-53
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1278 206.9 3.7e-53
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1278 207.0 4.1e-53
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1278 207.0 4.1e-53
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1278 207.1 4.4e-53
NP_001269467 (OMIM: 139380,613065,616973) guanine  ( 240)  776 130.3 3.6e-30
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340)  776 130.4 4.5e-30
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340)  776 130.4 4.5e-30
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340)  776 130.4 4.5e-30
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340)  776 130.4 4.5e-30
NP_001269468 (OMIM: 139380,613065,616973) guanine  ( 340)  776 130.4 4.5e-30
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340)  772 129.8 6.9e-30
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340)  766 128.9 1.3e-29
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340)  766 128.9 1.3e-29
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340)  766 128.9 1.3e-29
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340)  763 128.4 1.8e-29
NP_001284500 (OMIM: 139130,145500,617024) guanine  ( 339)  739 124.8 2.2e-28
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360)  625 107.4   4e-23
NP_008882 (OMIM: 601787) transcription initiation  ( 800)  389 71.8 4.7e-12
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  360 66.9   5e-11
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  360 66.9   5e-11
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521)  360 67.2 7.5e-11
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522)  360 67.2 7.5e-11
XP_011527969 (OMIM: 601475) PREDICTED: periodic tr ( 734)  323 61.7 4.7e-09
NP_005040 (OMIM: 601475) periodic tryptophan prote ( 919)  323 61.8 5.5e-09
NP_001093207 (OMIM: 616850) WD repeat domain-conta ( 315)  303 58.2 2.2e-08
NP_115708 (OMIM: 616850) WD repeat domain-containi ( 315)  303 58.2 2.2e-08
NP_620640 (OMIM: 601787) transcription initiation  ( 745)  307 59.3 2.6e-08
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540)  301 58.2 3.9e-08
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589)  301 58.2 4.2e-08
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627)  301 58.3 4.4e-08
XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  301 58.3 4.6e-08
XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  301 58.3 4.6e-08
XP_011530385 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  301 58.3 4.7e-08
XP_011530386 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  301 58.3 4.7e-08
XP_016863851 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  301 58.3 4.7e-08
XP_011530387 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  301 58.3 4.7e-08
NP_361014 (OMIM: 606278) F-box/WD repeat-containin ( 707)  301 58.3 4.7e-08
XP_011510122 (OMIM: 612173) PREDICTED: sperm-assoc ( 569)  292 56.9 1.1e-07
XP_005267076 (OMIM: 215100,266500,601757,614879) P ( 285)  286 55.6 1.3e-07
NP_055317 (OMIM: 608330) pre-mRNA-processing facto ( 504)  289 56.3 1.3e-07
NP_000279 (OMIM: 215100,266500,601757,614879) pero ( 323)  286 55.7 1.4e-07
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357)  285 55.6 1.6e-07
NP_056975 (OMIM: 605585) pre-mRNA-processing facto ( 579)  275 54.3 6.5e-07
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655)  274 54.2 7.8e-07
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655)  274 54.2 7.8e-07
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  274 54.2 7.8e-07
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658)  274 54.2 7.8e-07
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672)  274 54.2 7.9e-07
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672)  274 54.2 7.9e-07


>>XP_016877356 (OMIM: 604447) PREDICTED: guanine nucleot  (212 aa)
 initn: 1273 init1: 1273 opt: 1278  Z-score: 1077.2  bits: 206.8 E(85289): 2.9e-53
Smith-Waterman score: 1278; 97.4% identity (99.0% similar) in 194 aa overlap (92-283:19-212)

              70        80        90         100       110         
pF1KE0 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--KILTASGDGTCALWDVESGQLLQ
                                     :::..  .::::::::::::::::::::::
XP_016             MAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ
                           10        20        30        40        

     120       130       140       150       160       170         
pF1KE0 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYP
       50        60        70        80        90       100        

     180       190       200       210       220       230         
pF1KE0 SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV
      110       120       130       140       150       160        

     240       250       260       270       280   
pF1KE0 WDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       ::::::::::::::::::::::::::::::::::::::::::::
XP_016 WDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
      170       180       190       200       210  

>>XP_011519465 (OMIM: 604447) PREDICTED: guanine nucleot  (301 aa)
 initn: 1273 init1: 1273 opt: 1278  Z-score: 1075.3  bits: 206.9 E(85289): 3.7e-53
Smith-Waterman score: 1436; 76.7% identity (76.7% similar) in 301 aa overlap (53-283:1-301)

             30        40        50        60        70        80  
pF1KE0 KGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSS
                                     ::::::::::::::::::::::::::::::
XP_011                               MKTRRTLKGHGNKVLCMDWCKDKRRIVSSS
                                             10        20        30

             90                                                    
pF1KE0 QDGKVIVWDSFTTNK---------------------------------------------
       :::::::::::::::                                             
XP_011 QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENM
               40        50        60        70        80        90

                                100       110       120       130  
pF1KE0 -------------------------ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLD
                                :::::::::::::::::::::::::::::::::::
XP_011 AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLD
              100       110       120       130       140       150

            140       150       160       170       180       190  
pF1KE0 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDAT
              160       170       180       190       200       210

            200       210       220       230       240       250  
pF1KE0 CRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF
              220       230       240       250       260       270

            260       270       280   
pF1KE0 GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       :::::::::::::::::::::::::::::::
XP_011 GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
              280       290       300 

>>NP_006569 (OMIM: 604447) guanine nucleotide-binding pr  (353 aa)
 initn: 1273 init1: 1273 opt: 1278  Z-score: 1074.5  bits: 207.0 E(85289): 4.1e-53
Smith-Waterman score: 1525; 77.8% identity (77.8% similar) in 315 aa overlap (39-283:39-353)

       10        20        30        40        50        60        
pF1KE0 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLC
                                     ::::::::::::::::::::::::::::::
NP_006 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLC
       10        20        30        40        50        60        

       70        80        90                                      
pF1KE0 MDWCKDKRRIVSSSQDGKVIVWDSFTTNK-------------------------------
       :::::::::::::::::::::::::::::                               
NP_006 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNK
       70        80        90       100       110       120        

                                              100       110        
pF1KE0 ---------------------------------------ILTASGDGTCALWDVESGQLL
                                              :::::::::::::::::::::
NP_006 CSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL
      130       140       150       160       170       180        

      120       130       140       150       160       170        
pF1KE0 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
      190       200       210       220       230       240        

      180       190       200       210       220       230        
pF1KE0 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
      250       260       270       280       290       300        

      240       250       260       270       280   
pF1KE0 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       :::::::::::::::::::::::::::::::::::::::::::::
NP_006 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
      310       320       330       340       350   

>--
 initn: 228 init1: 228 opt: 228  Z-score: 209.0  bits: 46.9 E(85289): 6.7e-05
Smith-Waterman score: 228; 100.0% identity (100.0% similar) in 38 aa overlap (1-38:1-38)

               10        20        30        40        50        60
pF1KE0 MATEGLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLK
       ::::::::::::::::::::::::::::::::::::::                      
NP_006 MATEGLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKILTASGDGTCALWDVESGQLLQS
                                                                   
NP_006 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAI
               70        80        90       100       110       120

>>XP_011519464 (OMIM: 604447) PREDICTED: guanine nucleot  (353 aa)
 initn: 1273 init1: 1273 opt: 1278  Z-score: 1074.5  bits: 207.0 E(85289): 4.1e-53
Smith-Waterman score: 1525; 77.8% identity (77.8% similar) in 315 aa overlap (39-283:39-353)

       10        20        30        40        50        60        
pF1KE0 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLC
                                     ::::::::::::::::::::::::::::::
XP_011 SVCPSYTSTQLGRLRPSPTSTTGWLELQDMHQVAERVEALGQFVMKTRRTLKGHGNKVLC
       10        20        30        40        50        60        

       70        80        90                                      
pF1KE0 MDWCKDKRRIVSSSQDGKVIVWDSFTTNK-------------------------------
       :::::::::::::::::::::::::::::                               
XP_011 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNK
       70        80        90       100       110       120        

                                              100       110        
pF1KE0 ---------------------------------------ILTASGDGTCALWDVESGQLL
                                              :::::::::::::::::::::
XP_011 CSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL
      130       140       150       160       170       180        

      120       130       140       150       160       170        
pF1KE0 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
      190       200       210       220       230       240        

      180       190       200       210       220       230        
pF1KE0 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
      250       260       270       280       290       300        

      240       250       260       270       280   
pF1KE0 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       :::::::::::::::::::::::::::::::::::::::::::::
XP_011 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
      310       320       330       340       350   

>>NP_057278 (OMIM: 604447) guanine nucleotide-binding pr  (395 aa)
 initn: 1273 init1: 1273 opt: 1278  Z-score: 1073.9  bits: 207.1 E(85289): 4.4e-53
Smith-Waterman score: 1525; 77.8% identity (77.8% similar) in 315 aa overlap (39-283:81-395)

       10        20        30        40        50        60        
pF1KE0 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLC
                                     ::::::::::::::::::::::::::::::
NP_057 NETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLC
               60        70        80        90       100       110

       70        80        90                                      
pF1KE0 MDWCKDKRRIVSSSQDGKVIVWDSFTTNK-------------------------------
       :::::::::::::::::::::::::::::                               
NP_057 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNK
              120       130       140       150       160       170

                                              100       110        
pF1KE0 ---------------------------------------ILTASGDGTCALWDVESGQLL
                                              :::::::::::::::::::::
NP_057 CSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL
              180       190       200       210       220       230

      120       130       140       150       160       170        
pF1KE0 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYY
              240       250       260       270       280       290

      180       190       200       210       220       230        
pF1KE0 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTIN
              300       310       320       330       340       350

      240       250       260       270       280   
pF1KE0 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       :::::::::::::::::::::::::::::::::::::::::::::
NP_057 VWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
              360       370       380       390     

>--
 initn: 228 init1: 228 opt: 228  Z-score: 208.4  bits: 46.9 E(85289): 7.2e-05
Smith-Waterman score: 228; 100.0% identity (100.0% similar) in 38 aa overlap (1-38:43-80)

                                             10        20        30
pF1KE0                               MATEGLHENETLASLKSEAESLKGKLEEER
                                     ::::::::::::::::::::::::::::::
NP_057 SCDKCFKQRALRPVFKKSQQLSYCSTCAEIMATEGLHENETLASLKSEAESLKGKLEEER
             20        30        40        50        60        70  

               40        50        60        70        80        90
pF1KE0 AKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVW
       ::::::::                                                    
NP_057 AKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVW
             80        90       100       110       120       130  

>>NP_001269467 (OMIM: 139380,613065,616973) guanine nucl  (240 aa)
 initn: 882 init1: 615 opt: 776  Z-score: 662.7  bits: 130.3 E(85289): 3.6e-30
Smith-Waterman score: 776; 57.2% identity (81.8% similar) in 187 aa overlap (96-282:55-239)

          70        80        90       100       110       120     
pF1KE0 VLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKILTASGDGTCALWDVESGQLLQSFHGHG
                                     :.:.:.::: ::::::.:.::   .: :: 
NP_001 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT
           30        40        50        60        70        80    

         130       140       150       160       170       180     
pF1KE0 ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDAFA
       .::. :.:::.     ::::.:: .: .::.: :.: :.:  ::::::.. ..:.:.:::
NP_001 GDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA
           90         100       110       120       130       140  

         190       200       210       220       230       240     
pF1KE0 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG
       .:::::::::.:::::.:.  ::...:: : .::.:: :::::.:::.:.. ::::.::.
NP_001 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA
            150       160       170       180       190       200  

         250       260       270       280   
pF1KE0 SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       .:...: ::.:::: : :. :: :  .::::  :..: 
NP_001 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
            210       220       230       240

>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 1199 init1: 615 opt: 776  Z-score: 660.9  bits: 130.4 E(85289): 4.5e-30
Smith-Waterman score: 860; 43.8% identity (63.8% similar) in 315 aa overlap (35-282:27-339)

           10        20        30        40        50        60    
pF1KE0 GLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGN
                                     :. : :... .. .:.. :.:::::.::  
XP_016     MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLA
                   10        20        30        40        50      

           70        80        90                                  
pF1KE0 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------
       :.  : :  :.: .::.:::::.:.:::.::::                           
XP_016 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG
         60        70        80        90       100       110      

                                               100       110       
pF1KE0 ----------------------------------------ILTASGDGTCALWDVESGQL
                                               :.:.::: ::::::.:.:: 
XP_016 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ
        120       130       140       150       160       170      

       120       130       140       150       160       170       
pF1KE0 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRY
         .: :: .::. :.:::.     ::::.:: .: .::.: :.: :.:  ::::::.. .
XP_016 TTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF
        180       190         200       210       220       230    

       180       190       200       210       220       230       
pF1KE0 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI
       .:.:.:::.:::::::::.:::::.:.  ::...:: : .::.:: :::::.:::.:.. 
XP_016 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC
          240       250       260       270       280       290    

       240       250       260       270       280   
pF1KE0 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       ::::.::..:...: ::.:::: : :. :: :  .::::  :..: 
XP_016 NVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
          300       310       320       330       340

>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 1199 init1: 615 opt: 776  Z-score: 660.9  bits: 130.4 E(85289): 4.5e-30
Smith-Waterman score: 860; 43.8% identity (63.8% similar) in 315 aa overlap (35-282:27-339)

           10        20        30        40        50        60    
pF1KE0 GLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGN
                                     :. : :... .. .:.. :.:::::.::  
XP_016     MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLA
                   10        20        30        40        50      

           70        80        90                                  
pF1KE0 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------
       :.  : :  :.: .::.:::::.:.:::.::::                           
XP_016 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG
         60        70        80        90       100       110      

                                               100       110       
pF1KE0 ----------------------------------------ILTASGDGTCALWDVESGQL
                                               :.:.::: ::::::.:.:: 
XP_016 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ
        120       130       140       150       160       170      

       120       130       140       150       160       170       
pF1KE0 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRY
         .: :: .::. :.:::.     ::::.:: .: .::.: :.: :.:  ::::::.. .
XP_016 TTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF
        180       190         200       210       220       230    

       180       190       200       210       220       230       
pF1KE0 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI
       .:.:.:::.:::::::::.:::::.:.  ::...:: : .::.:: :::::.:::.:.. 
XP_016 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC
          240       250       260       270       280       290    

       240       250       260       270       280   
pF1KE0 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       ::::.::..:...: ::.:::: : :. :: :  .::::  :..: 
XP_016 NVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
          300       310       320       330       340

>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 1199 init1: 615 opt: 776  Z-score: 660.9  bits: 130.4 E(85289): 4.5e-30
Smith-Waterman score: 860; 43.8% identity (63.8% similar) in 315 aa overlap (35-282:27-339)

           10        20        30        40        50        60    
pF1KE0 GLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGN
                                     :. : :... .. .:.. :.:::::.::  
XP_016     MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLA
                   10        20        30        40        50      

           70        80        90                                  
pF1KE0 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------
       :.  : :  :.: .::.:::::.:.:::.::::                           
XP_016 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG
         60        70        80        90       100       110      

                                               100       110       
pF1KE0 ----------------------------------------ILTASGDGTCALWDVESGQL
                                               :.:.::: ::::::.:.:: 
XP_016 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ
        120       130       140       150       160       170      

       120       130       140       150       160       170       
pF1KE0 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRY
         .: :: .::. :.:::.     ::::.:: .: .::.: :.: :.:  ::::::.. .
XP_016 TTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF
        180       190         200       210       220       230    

       180       190       200       210       220       230       
pF1KE0 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI
       .:.:.:::.:::::::::.:::::.:.  ::...:: : .::.:: :::::.:::.:.. 
XP_016 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC
          240       250       260       270       280       290    

       240       250       260       270       280   
pF1KE0 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       ::::.::..:...: ::.:::: : :. :: :  .::::  :..: 
XP_016 NVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
          300       310       320       330       340

>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot  (340 aa)
 initn: 1199 init1: 615 opt: 776  Z-score: 660.9  bits: 130.4 E(85289): 4.5e-30
Smith-Waterman score: 860; 43.8% identity (63.8% similar) in 315 aa overlap (35-282:27-339)

           10        20        30        40        50        60    
pF1KE0 GLHENETLASLKSEAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGN
                                     :. : :... .. .:.. :.:::::.::  
NP_002     MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLA
                   10        20        30        40        50      

           70        80        90                                  
pF1KE0 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------
       :.  : :  :.: .::.:::::.:.:::.::::                           
NP_002 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG
         60        70        80        90       100       110      

                                               100       110       
pF1KE0 ----------------------------------------ILTASGDGTCALWDVESGQL
                                               :.:.::: ::::::.:.:: 
NP_002 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ
        120       130       140       150       160       170      

       120       130       140       150       160       170       
pF1KE0 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDINSVRY
         .: :: .::. :.:::.     ::::.:: .: .::.: :.: :.:  ::::::.. .
NP_002 TTTFTGHTGDVMSLSLAPDTR--LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF
        180       190         200       210       220       230    

       180       190       200       210       220       230       
pF1KE0 YPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTI
       .:.:.:::.:::::::::.:::::.:.  ::...:: : .::.:: :::::.:::.:.. 
NP_002 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNC
          240       250       260       270       280       290    

       240       250       260       270       280   
pF1KE0 NVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA
       ::::.::..:...: ::.:::: : :. :: :  .::::  :..: 
NP_002 NVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
          300       310       320       330       340




283 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 02:55:07 2016 done: Fri Nov  4 02:55:08 2016
 Total Scan time:  6.880 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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