Result of FASTA (omim) for pF1KB5741
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5741, 799 aa
  1>>>pF1KB5741 799 - 799 aa - 799 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8691+/-0.000596; mu= 14.7336+/- 0.036
 mean_var=250.2189+/-49.795, 0's: 0 Z-trim(113.2): 298  B-trim: 50 in 1/54
 Lambda= 0.081080
 statistics sampled from 22082 (22420) to 22082 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.612), E-opt: 0.2 (0.263), width:  16
 Scan time: 11.960

The best scores are:                                      opt bits E(85289)
NP_002204 (OMIM: 147561) integrin beta-5 precursor ( 799) 5624 672.8 1.6e-192
XP_016861841 (OMIM: 147561) PREDICTED: integrin be ( 691) 4863 583.7 9.1e-166
XP_016861840 (OMIM: 147561) PREDICTED: integrin be ( 691) 4863 583.7 9.1e-166
XP_016861842 (OMIM: 147561) PREDICTED: integrin be ( 691) 4863 583.7 9.1e-166
NP_000203 (OMIM: 173470,187800,273800,608446) inte ( 788) 3122 380.1  2e-104
XP_016861844 (OMIM: 147561) PREDICTED: integrin be ( 661) 3085 375.7 3.6e-103
XP_005247493 (OMIM: 147561) PREDICTED: integrin be ( 769) 3085 375.8 3.9e-103
XP_016861843 (OMIM: 147561) PREDICTED: integrin be ( 683) 3076 374.7 7.6e-103
XP_006713693 (OMIM: 147561) PREDICTED: integrin be ( 754) 2762 338.0 9.2e-92
NP_000879 (OMIM: 147558,616221) integrin beta-6 is ( 788) 2746 336.2 3.5e-91
NP_001269282 (OMIM: 147558,616221) integrin beta-6 ( 788) 2746 336.2 3.5e-91
NP_001269317 (OMIM: 147558,616221) integrin beta-6 ( 746) 2609 320.1 2.2e-86
NP_001269318 (OMIM: 147558,616221) integrin beta-6 ( 715) 2445 300.9 1.3e-80
NP_001269283 (OMIM: 147558,616221) integrin beta-6 ( 693) 2439 300.2 2.1e-80
NP_001269319 (OMIM: 147558,616221) integrin beta-6 ( 650) 2329 287.3 1.5e-76
NP_391988 (OMIM: 135630) integrin beta-1 isoform 1 ( 801) 2314 285.6 5.7e-76
NP_002202 (OMIM: 135630) integrin beta-1 isoform 1 ( 798) 2309 285.0 8.5e-76
NP_596867 (OMIM: 135630) integrin beta-1 isoform 1 ( 798) 2309 285.0 8.5e-76
NP_001269284 (OMIM: 147558,616221) integrin beta-6 ( 681) 2050 254.6   1e-66
XP_005268909 (OMIM: 147559) PREDICTED: integrin be ( 798) 2043 253.9   2e-66
XP_005268908 (OMIM: 147559) PREDICTED: integrin be ( 798) 2043 253.9   2e-66
NP_000880 (OMIM: 147559) integrin beta-7 precursor ( 798) 2043 253.9   2e-66
XP_006719439 (OMIM: 147559) PREDICTED: integrin be ( 782) 1993 248.1 1.1e-64
NP_001120963 (OMIM: 116920,600065) integrin beta-2 ( 769) 1803 225.8 5.5e-58
NP_000202 (OMIM: 116920,600065) integrin beta-2 is ( 769) 1803 225.8 5.5e-58
NP_001290167 (OMIM: 116920,600065) integrin beta-2 ( 700) 1736 217.9 1.2e-55
XP_006724064 (OMIM: 116920,600065) PREDICTED: inte ( 700) 1736 217.9 1.2e-55
XP_016883830 (OMIM: 116920,600065) PREDICTED: inte ( 700) 1736 217.9 1.2e-55
XP_011513696 (OMIM: 604160) PREDICTED: integrin be ( 758) 1629 205.5 7.3e-52
XP_011513695 (OMIM: 604160) PREDICTED: integrin be ( 761) 1629 205.5 7.3e-52
NP_002205 (OMIM: 604160) integrin beta-8 precursor ( 769) 1629 205.5 7.3e-52
XP_016867667 (OMIM: 604160) PREDICTED: integrin be ( 769) 1629 205.5 7.3e-52
XP_016867668 (OMIM: 604160) PREDICTED: integrin be ( 769) 1629 205.5 7.3e-52
XP_016867669 (OMIM: 604160) PREDICTED: integrin be ( 634) 1556 196.8 2.4e-49
XP_016867670 (OMIM: 604160) PREDICTED: integrin be ( 634) 1556 196.8 2.4e-49
XP_016867671 (OMIM: 604160) PREDICTED: integrin be ( 634) 1556 196.8 2.4e-49
XP_016867672 (OMIM: 604160) PREDICTED: integrin be ( 634) 1556 196.8 2.4e-49
XP_011513698 (OMIM: 604160) PREDICTED: integrin be ( 634) 1556 196.8 2.4e-49
NP_001308052 (OMIM: 131800,147557,226650,226730) i (1752) 1475 188.0 3.1e-46
NP_001005731 (OMIM: 131800,147557,226650,226730) i (1752) 1475 188.0 3.1e-46
XP_006721933 (OMIM: 131800,147557,226650,226730) P (1787) 1475 188.0 3.1e-46
NP_001005619 (OMIM: 131800,147557,226650,226730) i (1805) 1475 188.0 3.1e-46
XP_011523053 (OMIM: 131800,147557,226650,226730) P (1807) 1475 188.0 3.1e-46
NP_000204 (OMIM: 131800,147557,226650,226730) inte (1822) 1475 188.0 3.1e-46
XP_006721931 (OMIM: 131800,147557,226650,226730) P (1840) 1475 188.0 3.2e-46
XP_006721930 (OMIM: 131800,147557,226650,226730) P (1857) 1475 188.0 3.2e-46
XP_005257366 (OMIM: 131800,147557,226650,226730) P (1875) 1475 188.0 3.2e-46
XP_005257368 (OMIM: 131800,147557,226650,226730) P (1875) 1475 188.0 3.2e-46
XP_006721929 (OMIM: 131800,147557,226650,226730) P (1910) 1475 188.0 3.2e-46
NP_001258683 (OMIM: 604234) integrin beta-like pro ( 353)  476 70.1 1.9e-11


>>NP_002204 (OMIM: 147561) integrin beta-5 precursor [Ho  (799 aa)
 initn: 5624 init1: 5624 opt: 5624  Z-score: 3577.5  bits: 672.8 E(85289): 1.6e-192
Smith-Waterman score: 5624; 100.0% identity (100.0% similar) in 799 aa overlap (1-799:1-799)

               10        20        30        40        50        60
pF1KB5 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB5 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB5 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB5 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB5 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB5 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KB5 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
              730       740       750       760       770       780

              790         
pF1KB5 HTVDFTFNKFNKSYNGTVD
       :::::::::::::::::::
NP_002 HTVDFTFNKFNKSYNGTVD
              790         

>>XP_016861841 (OMIM: 147561) PREDICTED: integrin beta-5  (691 aa)
 initn: 4863 init1: 4863 opt: 4863  Z-score: 3097.0  bits: 583.7 E(85289): 9.1e-166
Smith-Waterman score: 4863; 100.0% identity (100.0% similar) in 691 aa overlap (109-799:1-691)

       80        90       100       110       120       130        
pF1KB5 IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                     ::::::::::::::::::::::::::::::
XP_016                               MTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                             10        20        30

      140       150       160       170       180       190        
pF1KB5 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB5 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
              100       110       120       130       140       150

      260       270       280       290       300       310        
pF1KB5 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
              160       170       180       190       200       210

      320       330       340       350       360       370        
pF1KB5 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
              220       230       240       250       260       270

      380       390       400       410       420       430        
pF1KB5 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
              280       290       300       310       320       330

      440       450       460       470       480       490        
pF1KB5 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
              340       350       360       370       380       390

      500       510       520       530       540       550        
pF1KB5 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
              400       410       420       430       440       450

      560       570       580       590       600       610        
pF1KB5 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
              460       470       480       490       500       510

      620       630       640       650       660       670        
pF1KB5 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
              520       530       540       550       560       570

      680       690       700       710       720       730        
pF1KB5 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
              580       590       600       610       620       630

      740       750       760       770       780       790        
pF1KB5 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
              640       650       660       670       680       690

        
pF1KB5 D
       :
XP_016 D
        

>>XP_016861840 (OMIM: 147561) PREDICTED: integrin beta-5  (691 aa)
 initn: 4863 init1: 4863 opt: 4863  Z-score: 3097.0  bits: 583.7 E(85289): 9.1e-166
Smith-Waterman score: 4863; 100.0% identity (100.0% similar) in 691 aa overlap (109-799:1-691)

       80        90       100       110       120       130        
pF1KB5 IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                     ::::::::::::::::::::::::::::::
XP_016                               MTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                             10        20        30

      140       150       160       170       180       190        
pF1KB5 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB5 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
              100       110       120       130       140       150

      260       270       280       290       300       310        
pF1KB5 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
              160       170       180       190       200       210

      320       330       340       350       360       370        
pF1KB5 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
              220       230       240       250       260       270

      380       390       400       410       420       430        
pF1KB5 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
              280       290       300       310       320       330

      440       450       460       470       480       490        
pF1KB5 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
              340       350       360       370       380       390

      500       510       520       530       540       550        
pF1KB5 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
              400       410       420       430       440       450

      560       570       580       590       600       610        
pF1KB5 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
              460       470       480       490       500       510

      620       630       640       650       660       670        
pF1KB5 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
              520       530       540       550       560       570

      680       690       700       710       720       730        
pF1KB5 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
              580       590       600       610       620       630

      740       750       760       770       780       790        
pF1KB5 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
              640       650       660       670       680       690

        
pF1KB5 D
       :
XP_016 D
        

>>XP_016861842 (OMIM: 147561) PREDICTED: integrin beta-5  (691 aa)
 initn: 4863 init1: 4863 opt: 4863  Z-score: 3097.0  bits: 583.7 E(85289): 9.1e-166
Smith-Waterman score: 4863; 100.0% identity (100.0% similar) in 691 aa overlap (109-799:1-691)

       80        90       100       110       120       130        
pF1KB5 IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                     ::::::::::::::::::::::::::::::
XP_016                               MTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                             10        20        30

      140       150       160       170       180       190        
pF1KB5 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB5 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
              100       110       120       130       140       150

      260       270       280       290       300       310        
pF1KB5 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
              160       170       180       190       200       210

      320       330       340       350       360       370        
pF1KB5 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
              220       230       240       250       260       270

      380       390       400       410       420       430        
pF1KB5 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
              280       290       300       310       320       330

      440       450       460       470       480       490        
pF1KB5 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
              340       350       360       370       380       390

      500       510       520       530       540       550        
pF1KB5 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
              400       410       420       430       440       450

      560       570       580       590       600       610        
pF1KB5 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
              460       470       480       490       500       510

      620       630       640       650       660       670        
pF1KB5 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
              520       530       540       550       560       570

      680       690       700       710       720       730        
pF1KB5 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
              580       590       600       610       620       630

      740       750       760       770       780       790        
pF1KB5 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
              640       650       660       670       680       690

        
pF1KB5 D
       :
XP_016 D
        

>>NP_000203 (OMIM: 173470,187800,273800,608446) integrin  (788 aa)
 initn: 2942 init1: 2122 opt: 3122  Z-score: 1995.8  bits: 380.1 E(85289): 2e-104
Smith-Waterman score: 3122; 55.7% identity (78.8% similar) in 788 aa overlap (2-782:5-781)

                  10        20         30        40        50      
pF1KB5    MPRAPAPLYACLLGLCALLPR-LAGLNICTSGSATSCEECLLIHPKCAWCSKE--DF
           :: : ::.: .:.: ::    ..: ::::. ...::..:: . : ::::: :   .
NP_000 MRARPR-PRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPL
                10        20        30        40        50         

           60        70         80        90       100       110   
pF1KB5 GSPRSITSRCDLRANLVKNGCGGE-IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQE
       ::::     :::. ::.:..:. : :: :.:  .::.. :::.::::... .: :..::.
NP_000 GSPR-----CDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSS-QVTQVSPQR
      60             70        80        90       100        110   

           120       130       140       150       160       170   
pF1KB5 IAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTS
       ::. ::: :. .:..:::::::::::.::::::: :::::: .:..:::::: .::::::
NP_000 IALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTS
           120       130       140       150       160       170   

           180       190        200       210       220       230  
pF1KB5 NFRLGFGSFVDKDISPFSY-TAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNE
       :.:.:::.:::: .::. : . :.   :::  : .  .:.: ::..:.: :::.:  :::
NP_000 NLRIGFGAFVDKPVSPYMYISPPEALENPC--YDMKTTCLPMFGYKHVLTLTDQVTRFNE
           180       190       200         210       220       230 

            240       250       260       270       280       290  
pF1KB5 EVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGL
       ::.:: ::::::::::::::..::.:: ::::::.:: ::::::::   ::::::.:.:.
NP_000 EVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGI
             240       250       260       270       280       290 

            300       310       320       330       340       350  
pF1KB5 VQPHDGQCHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALI
       :::.:::::..  :.:.::. ::::::.:. :::...:::::::::.:   ::.:.. ::
NP_000 VQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELI
             300       310       320       330       340       350 

            360       370       380       390       400       410  
pF1KB5 PGTTVEILDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRK
       ::::: .:. ::.:..:::..::..::::::: : : ::.:.: :.::: ..   :: ..
NP_000 PGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKS
             360       370       380       390       400       410 

            420       430       440       450       460       470  
pF1KB5 CEGLKIGDTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPN
       : :::::::.:: .  ..:.:: .. :. :...::::.::: : ::..: :.:..  :::
NP_000 CMGLKIGDTVSFSIEAKVRGCP-QEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPN
             420       430        440       450       460       470

             480       490       500       510       520       530 
pF1KB5 SARCN-GSGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCN
       : ::: :.::. ::.:.:.::.::..:::.. . .   :. :   ::.:.:: ::.: :.
NP_000 SHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCG
              480       490       500       510       520       530

             540       550       560       570       580       590 
pF1KB5 QCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDI
       :: :  :.:::: : .::::.:::.: :: .:::::.: ::.: : . . :  :::.:  
NP_000 QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRT
              540       550       560       570       580       590

             600       610       620       630       640       650 
pF1KB5 STCRGRDGQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGK
       .:: . .: .:: ::.: ::.: : .::..:. :::::::::::. :..::::  .  : 
NP_000 DTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGA
              600       610       620       630       640       650

              660       670       680       690       700       710
pF1KB5 -PDNQTCHSLCRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLR
         :..::.  ::::. . :  .    ..:: : ::.  :::. : : :  :::: : :..
NP_000 LHDENTCNRYCRDEIES-VKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVE
              660        670       680       690       700         

              720       730       740       750       760       770
pF1KB5 EPECGNTPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMAS
       :::: . :. ...::.:.:.:::.::: : :::::.:::::.:::::. ::.::... :.
NP_000 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN
     710       720       730       740       750       760         

              780       790         
pF1KB5 NPLYRKPISTHTVDFTFNKFNKSYNGTVD
       ::::..  :: :                 
NP_000 NPLYKEATSTFTNITYRGT          
     770       780                  

>>XP_016861844 (OMIM: 147561) PREDICTED: integrin beta-5  (661 aa)
 initn: 3082 init1: 3082 opt: 3085  Z-score: 1973.2  bits: 375.7 E(85289): 3.6e-103
Smith-Waterman score: 4608; 95.7% identity (95.7% similar) in 691 aa overlap (109-799:1-661)

       80        90       100       110       120       130        
pF1KB5 IESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                     ::::::::::::::::::::::::::::::
XP_016                               MTPQEIAVNLRPGDKTTFQLQVRQVEDYPV
                                             10        20        30

      140       150       160       170       180       190        
pF1KB5 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQ
               40        50        60        70        80        90

      200       210       220       230       240       250        
pF1KB5 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAV
              100       110       120       130       140       150

      260       270       280       290       300       310        
pF1KB5 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPS
              160       170       180       190       200       210

      320       330       340       350       360       370        
pF1KB5 LALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSI
       ::::::::::::::::::::::::::::                              ::
XP_016 LALLGEKLAENNINLIFAVTKNHYMLYK------------------------------SI
              220       230                                     240

      380       390       400       410       420       430        
pF1KB5 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHT
              250       260       270       280       290       300

      440       450       460       470       480       490        
pF1KB5 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSGTYVCGLCECSPGYLGTRC
              310       320       330       340       350       360

      500       510       520       530       540       550        
pF1KB5 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARN
              370       380       390       400       410       420

      560       570       580       590       600       610        
pF1KB5 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEP
              430       440       450       460       470       480

      620       630       640       650       660       670        
pF1KB5 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCRDEVITWVDTIVKDDQE
              490       500       510       520       530       540

      680       690       700       710       720       730        
pF1KB5 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLAL
              550       560       570       580       590       600

      740       750       760       770       780       790        
pF1KB5 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPISTHTVDFTFNKFNKSYNGTV
              610       620       630       640       650       660

        
pF1KB5 D
       :
XP_016 D
        

>>XP_005247493 (OMIM: 147561) PREDICTED: integrin beta-5  (769 aa)
 initn: 3082 init1: 3082 opt: 3085  Z-score: 1972.5  bits: 375.8 E(85289): 3.9e-103
Smith-Waterman score: 5369; 96.2% identity (96.2% similar) in 799 aa overlap (1-799:1-769)

               10        20        30        40        50        60
pF1KB5 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
       ::::::::::::::::::::::::::::::::::::::::::::::              
XP_005 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYK--------------
              310       320       330       340                    

              370       380       390       400       410       420
pF1KB5 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
                       ::::::::::::::::::::::::::::::::::::::::::::
XP_005 ----------------SIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
                        350       360       370       380       390

              430       440       450       460       470       480
pF1KB5 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
              400       410       420       430       440       450

              490       500       510       520       530       540
pF1KB5 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
              460       470       480       490       500       510

              550       560       570       580       590       600
pF1KB5 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
              520       530       540       550       560       570

              610       620       630       640       650       660
pF1KB5 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
              580       590       600       610       620       630

              670       680       690       700       710       720
pF1KB5 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
              640       650       660       670       680       690

              730       740       750       760       770       780
pF1KB5 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
              700       710       720       730       740       750

              790         
pF1KB5 HTVDFTFNKFNKSYNGTVD
       :::::::::::::::::::
XP_005 HTVDFTFNKFNKSYNGTVD
              760         

>>XP_016861843 (OMIM: 147561) PREDICTED: integrin beta-5  (683 aa)
 initn: 4846 init1: 3074 opt: 3076  Z-score: 1967.3  bits: 374.7 E(85289): 7.6e-103
Smith-Waterman score: 4618; 85.5% identity (85.5% similar) in 799 aa overlap (1-799:1-683)

               10        20        30        40        50        60
pF1KB5 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
       ::::::::::::::::::::                                        
XP_016 RNRDAPEGGFDAVLQAAVCK----------------------------------------
              250       260                                        

              310       320       330       340       350       360
pF1KB5 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
                                                                   
XP_016 ------------------------------------------------------------
                                                                   

              370       380       390       400       410       420
pF1KB5 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
                       ::::::::::::::::::::::::::::::::::::::::::::
XP_016 ----------------SIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
                              270       280       290       300    

              430       440       450       460       470       480
pF1KB5 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
          310       320       330       340       350       360    

              490       500       510       520       530       540
pF1KB5 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
          370       380       390       400       410       420    

              550       560       570       580       590       600
pF1KB5 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
          430       440       450       460       470       480    

              610       620       630       640       650       660
pF1KB5 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
          490       500       510       520       530       540    

              670       680       690       700       710       720
pF1KB5 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
          550       560       570       580       590       600    

              730       740       750       760       770       780
pF1KB5 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
          610       620       630       640       650       660    

              790         
pF1KB5 HTVDFTFNKFNKSYNGTVD
       :::::::::::::::::::
XP_016 HTVDFTFNKFNKSYNGTVD
          670       680   

>>XP_006713693 (OMIM: 147561) PREDICTED: integrin beta-5  (754 aa)
 initn: 2762 init1: 2762 opt: 2762  Z-score: 1768.4  bits: 338.0 E(85289): 9.2e-92
Smith-Waterman score: 5212; 94.4% identity (94.4% similar) in 799 aa overlap (1-799:1-754)

               10        20        30        40        50        60
pF1KB5 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSRCDLRANLVKNGCGGEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB5 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEIL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB5 DGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
       ::::::::::::::::                                            
XP_006 DGDSKNIIQLIINAYN--------------------------------------------
              370                                                  

              430       440       450       460       470       480
pF1KB5 TASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 -ASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCNGSG
         380       390       400       410       420       430     

              490       500       510       520       530       540
pF1KB5 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEF
         440       450       460       470       480       490     

              550       560       570       580       590       600
pF1KB5 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQ
         500       510       520       530       540       550     

              610       620       630       640       650       660
pF1KB5 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSL
         560       570       580       590       600       610     

              670       680       690       700       710       720
pF1KB5 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CRDEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNA
         620       630       640       650       660       670     

              730       740       750       760       770       780
pF1KB5 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
         680       690       700       710       720       730     

              790         
pF1KB5 HTVDFTFNKFNKSYNGTVD
       :::::::::::::::::::
XP_006 HTVDFTFNKFNKSYNGTVD
         740       750    

>>NP_000879 (OMIM: 147558,616221) integrin beta-6 isofor  (788 aa)
 initn: 2627 init1: 853 opt: 2746  Z-score: 1758.1  bits: 336.2 E(85289): 3.5e-91
Smith-Waterman score: 2746; 49.5% identity (76.9% similar) in 757 aa overlap (28-780:23-768)

               10        20        30        40        50        60
pF1KB5 MPRAPAPLYACLLGLCALLPRLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRSI
                                  :. :.: .::.:::: :.::::..:.:  : ..
NP_000      MGIELLCLFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGV
                    10        20        30        40        50     

               70         80        90       100       110         
pF1KB5 TSRCDLRANLVKNGCG-GEIESPASSFHVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLR
         :::  :::. .::  . ::.:.:. ..:.. :::  :  . . :..:..:: . ..::
NP_000 GERCDTPANLLAKGCQLNFIENPVSQVEILKNKPLSV-GRQKNSSDIVQIAPQSLILKLR
          60        70        80        90        100       110    

     120       130       140       150       160       170         
pF1KB5 PGDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGF
       ::   :.:..:::.:::::::::::::: :: :::..:. ::..:..:: ::::::::::
NP_000 PGGAQTLQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGF
          120       130       140       150       160       170    

     180       190       200       210       220       230         
pF1KB5 GSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV
       ::::.: .:::  :.:.  .::: .   :  :.:.:::.:.::::. .. ::: :..:..
NP_000 GSFVEKPVSPFVKTTPEEIANPCSSIPYF--CLPTFGFKHILPLTNDAERFNEIVKNQKI
          180       190       200         210       220       230  

     240       250       260       270       280       290         
pF1KB5 SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ
       : : :.:::::::..::::::::::::.:.::::::..:   :...:.::.:.: :.:: 
NP_000 SANIDTPEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGL
            240       250       260       270       280       290  

     300       310       320       330       340       350         
pF1KB5 CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEI
       :::.  :::. :. ..::... : .::..::. ::::::...  ::.:.. ::::.:: .
NP_000 CHLDSKNEYSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGL
            300       310       320       330       340       350  

     360       370       380       390       400       410         
pF1KB5 LDGDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIG
       :. :: ::.::::.::. .::.::: :  . : ::: ::: :..:. .  :.::  .:.:
NP_000 LQKDSGNILQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVG
            360       370       380       390       400       410  

     420       430       440       450       460       470         
pF1KB5 DTASFEVSLEARSCPSRHTEHVFALRPVGFRDSLEVGVTYNCTCGCSVGLEPNSARCN-G
       ::::: :...   :  :...:.. ..:::. :.::. :. .:.: :.  .: ::..:. :
NP_000 DTASFSVTVNIPHCE-RRSRHII-IKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHG
            420        430        440       450       460       470

      480       490       500       510       520       530        
pF1KB5 SGTYVCGLCECSPGYLGTRCECQDGENQSVYQNLCREAEGKPLCSGRGDCSCNQCSCFES
       .:.. ::.: : ::..: ::::  ::.. .  . :.::  .: ::::::: :.:: :  :
NP_000 NGSFQCGVCACHPGHMGPRCEC--GEDM-LSTDSCKEAPDHPSCSGRGDCYCGQCICHLS
              480       490          500       510       520       

      540       550       560       570       580       590        
pF1KB5 EFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRGRD
        .:.::::.:.::::::.:.::.::.:.:.: :::: :..:. :. :::.:. ..: ..:
NP_000 PYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSED
       530       540       550       560       570       580       

      600       610       620       630       640       650        
pF1KB5 GQICSERGHCLCGQCQCTEPGAFGEMCEKCPTCPDACSTKRDCVECLLLHSGKPDNQTCH
       : .:: :: :.::.: ::.::: :  ::.:::: : :..::.:.:: :  .:.  .. : 
NP_000 GVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREE-CV
       590       600       610       620       630       640       

      660         670       680       690       700       710      
pF1KB5 SLCR--DEVITWVDTIVKDDQEAVLCFYKTAKDCVMMFTYVELPSGKSNLTVLREPECGN
       . :.    .:.  . . ::   .: :  .  ..:.. :  .    ::. .  . : .: .
NP_000 DKCKLAGATISEEEDFSKDG--SVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPK
        650       660         670       680       690       700    

        720       730       740       750       760       770      
pF1KB5 TPNAMTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRK
        ::   :.:.:  .:::.:..:: ::::::..:::.: :::..:::.:... ..::::: 
NP_000 PPNIPMIMLGVSLAILLIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRG
          710       720       730       740       750       760    

        780       790          
pF1KB5 PISTHTVDFTFNKFNKSYNGTVD 
         ::                    
NP_000 STSTFKNVTYKHREKQKVDLSTDC
          770       780        




799 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:14:35 2016 done: Sat Nov  5 21:14:36 2016
 Total Scan time: 11.960 Total Display time:  0.250

Function used was FASTA [36.3.4 Apr, 2011]
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