Result of FASTA (omim) for pF1KB9977
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9977, 557 aa
  1>>>pF1KB9977 557 - 557 aa - 557 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1708+/-0.000433; mu= 13.7542+/- 0.027
 mean_var=89.5971+/-18.604, 0's: 0 Z-trim(110.3): 81  B-trim: 168 in 2/53
 Lambda= 0.135496
 statistics sampled from 18595 (18662) to 18595 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.575), E-opt: 0.2 (0.219), width:  16
 Scan time:  9.600

The best scores are:                                      opt bits E(85289)
NP_000620 (OMIM: 107450) interferon alpha/beta rec ( 557) 3694 733.1 5.6e-211
XP_005261021 (OMIM: 107450) PREDICTED: interferon  ( 488) 3251 646.4 5.9e-185
XP_011527854 (OMIM: 107450) PREDICTED: interferon  ( 270) 1763 355.4 1.3e-97
NP_000619 (OMIM: 123889,610424,612567) interleukin ( 325)  298 69.1 2.5e-11
NP_055247 (OMIM: 605620) interleukin-20 receptor s ( 553)  239 57.7 1.1e-07
NP_005525 (OMIM: 147569,614889) interferon gamma r ( 337)  232 56.2   2e-07
XP_016866443 (OMIM: 605620) PREDICTED: interleukin ( 554)  234 56.7 2.3e-07
XP_011527856 (OMIM: 147569,614889) PREDICTED: inte ( 339)  226 55.0 4.4e-07
NP_001316057 (OMIM: 147569,614889) interferon gamm ( 356)  226 55.0 4.6e-07
XP_011527855 (OMIM: 147569,614889) PREDICTED: inte ( 362)  226 55.0 4.7e-07
NP_851826 (OMIM: 606648) interleukin-22 receptor s ( 231)  200 49.8 1.1e-05
NP_001265651 (OMIM: 605620) interleukin-20 recepto ( 504)  204 50.8 1.2e-05
XP_016866444 (OMIM: 605620) PREDICTED: interleukin ( 505)  199 49.8 2.4e-05
NP_443194 (OMIM: 606648) interleukin-22 receptor s ( 263)  190 47.9 4.7e-05
NP_067081 (OMIM: 605457) interleukin-22 receptor s ( 574)  194 48.9 5.3e-05
NP_000407 (OMIM: 107470,209950,600263,607948,61042 ( 489)  158 41.8   0.006
NP_734464 (OMIM: 607404) interferon lambda recepto ( 520)  156 41.4  0.0083


>>NP_000620 (OMIM: 107450) interferon alpha/beta recepto  (557 aa)
 initn: 3694 init1: 3694 opt: 3694  Z-score: 3908.7  bits: 733.1 E(85289): 5.6e-211
Smith-Waterman score: 3694; 100.0% identity (100.0% similar) in 557 aa overlap (1-557:1-557)

               10        20        30        40        50        60
pF1KB9 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 TPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 NQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 NQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 GIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIGAPKQSGNTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIGAPKQSGNTP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 VIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 VIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 FSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRCINYVFFPSLKPSSSIDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 FSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRCINYVFFPSLKPSSSIDE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 YFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 YFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNYSN
              490       500       510       520       530       540

              550       
pF1KB9 EDESESKTSEELQQDFV
       :::::::::::::::::
NP_000 EDESESKTSEELQQDFV
              550       

>>XP_005261021 (OMIM: 107450) PREDICTED: interferon alph  (488 aa)
 initn: 3251 init1: 3251 opt: 3251  Z-score: 3441.5  bits: 646.4 E(85289): 5.9e-185
Smith-Waterman score: 3251; 100.0% identity (100.0% similar) in 488 aa overlap (70-557:1-488)

      40        50        60        70        80        90         
pF1KB9 IIDDNFILRWNRSDESVGNVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEE
                                     ::::::::::::::::::::::::::::::
XP_005                               MDNWIKLSGCQNITSTKCNFSSLKLNVYEE
                                             10        20        30

     100       110       120       130       140       150         
pF1KB9 IKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKLRIRAEKENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALD
               40        50        60        70        80        90

     160       170       180       190       200       210         
pF1KB9 GLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GLSFTYSLVIWKNSSGVEERIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVH
              100       110       120       130       140       150

     220       230       240       250       260       270         
pF1KB9 CIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQ
              160       170       180       190       200       210

     280       290       300       310       320       330         
pF1KB9 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNI
              220       230       240       250       260       270

     340       350       360       370       380       390         
pF1KB9 RSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPL
              280       290       300       310       320       330

     400       410       420       430       440       450         
pF1KB9 TVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKV
              340       350       360       370       380       390

     460       470       480       490       500       510         
pF1KB9 FLRCINYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLRCINYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQ
              400       410       420       430       440       450

     520       530       540       550       
pF1KB9 TDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV
       ::::::::::::::::::::::::::::::::::::::
XP_005 TDEDHKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV
              460       470       480        

>>XP_011527854 (OMIM: 107450) PREDICTED: interferon alph  (270 aa)
 initn: 1763 init1: 1763 opt: 1763  Z-score: 1873.4  bits: 355.4 E(85289): 1.3e-97
Smith-Waterman score: 1763; 98.5% identity (99.6% similar) in 268 aa overlap (1-268:1-268)

               10        20        30        40        50        60
pF1KB9 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRAEKENTSSWYEVDSF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 TPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPFRKAQIGPPEVHLEAEDKAIVIHISPGTKDSVMWALDGLSFTYSLVIWKNSSGVEERI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 NQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQK
       ::::::::::::::::::::::: ...:                                
XP_011 NQNYVLKWDYTYANMTFQVQWLHLYFRRPR                              
              250       260       270                              

>>NP_000619 (OMIM: 123889,610424,612567) interleukin-10   (325 aa)
 initn: 218 init1: 121 opt: 298  Z-score: 324.4  bits: 69.1 E(85289): 2.5e-11
Smith-Waterman score: 357; 25.0% identity (60.2% similar) in 324 aa overlap (209-521:2-308)

      180       190       200       210       220       230        
pF1KB9 RIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVS
                                     .:..: .    :. ... . .:::::....
NP_000                              MAWSLGSWLG-GCLLVSALGMVPPPENVRMN
                                            10         20        30

      240          250       260       270       280       290     
pF1KB9 VQNQNYVLKWD---YTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQ
         : . .:.:.   .. .:.:: .:.:            :.  :   : :.  :.: : .
NP_000 SVNFKNILQWESPAFAKGNLTFTAQYLS-----------YRIFQ-DKCMNTTLTECDF-S
               40        50                   60         70        

         300       310       320       330       340       350     
pF1KB9 NVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIGAPKQ
       .. . : . :::.:  ... : : . : :    .... :: .... :.::.:. . ::: 
NP_000 SLSKYGDHTLRVRAEFADEHSDWVN-ITFCPVDDTIIGPPGMQVEVLADSLHMRFLAPKI
        80        90       100        110       120       130      

           360         370       380       390       400       410 
pF1KB9 SGN--TPVIQDY--PLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTM
        ..  : ....      :.. .:.: .. . .:  .    .. ::.: :.:::..:.   
NP_000 ENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFLP
        140       150       160       170       180       190      

             420       430       440        450       460       470
pF1KB9 DEKLNKSSVFSDAVCEKTKPGNTSKIWLIVGICIA-LFALPFVIYAAKVFLRCINYVFFP
       :.  ::.. .:. :::.:   .:   :... : .: .: . ... .  ..: :.      
NP_000 DR--NKAGEWSEPVCEQTTHDETVPSWMVAVILMASVFMVCLALLGCFALLWCVYKKTKY
          200       210       220       230       240       250    

              480          490       500       510       520       
pF1KB9 SLKPSSSIDEYFSE---QPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKY
       ...: .:. ....:   .: .: ::  :    ..  .....:.::   :... .      
NP_000 AFSPRNSLPQHLKEFLGHPHHNTLLFFSFPLSDENDVFDKLSVIAEDSESGKQNPGDSCS
          260       270       280       290       300       310    

       530       540       550       
pF1KB9 SSQTSQDSGNYSNEDESESKTSEELQQDFV
                                     
NP_000 LGTPPGQGPQS                   
          320                        

>>NP_055247 (OMIM: 605620) interleukin-20 receptor subun  (553 aa)
 initn: 173 init1:  89 opt: 239  Z-score: 258.6  bits: 57.7 E(85289): 1.1e-07
Smith-Waterman score: 249; 26.3% identity (57.5% similar) in 228 aa overlap (11-223:18-239)

                      10          20        30        40        50 
pF1KB9        MMVVLLGATTLVLVAVAPW--VLSAAAGGKNLKSPQKVEVDIIDDNFILRWNR
                        :.:. .:::  ..  ..::  : .: ..    :. . .:.:. 
NP_055 MRAPGRPALRPLPLPPLLLLLLAAPWGRAVPCVSGG--LPKPANITFLSINMKNVLQWTP
               10        20        30          40        50        

               60        70        80        90       100          
pF1KB9 SDESVG-NVTFSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA-EKE
        .   : .::.. .:   :. .:.. : :.::. : :..:.   .  ..   ...:    
NP_055 PEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYAKVKAIWGT
       60        70        80        90       100       110        

     110       120       130       140             150          160
pF1KB9 NTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAI-VIHISP-----GTKD---SVMWALDG
       . :.: :   : :: ..::::::: : ...:.: :.  .:     . .:   :..   ..
NP_055 KCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSN
      120       130       140       150       160       170        

              170       180       190         200       210        
pF1KB9 LSFTYSLVIWKNSSGVEERIENIYSRHKIYK--LSPETTYCLKVKAALLTSWKIGVYSPV
       :... :..  :..    . . :    : .    : :.: ::..:.. .    . .  :  
NP_055 LKYNVSVLNTKSNRTWSQCVTN----HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEK
      180       190       200           210       220       230    

      220       230       240       250       260       270        
pF1KB9 HCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWK
       .: .:                                                       
NP_055 QCARTLKDQSSEFKAKIIFWYVLPISITVFLFSVMGYSIYRYIHVGKEKHPANLILIYGN
          240       250       260       270       280       290    

>>NP_005525 (OMIM: 147569,614889) interferon gamma recep  (337 aa)
 initn: 157 init1:  81 opt: 232  Z-score: 254.5  bits: 56.2 E(85289): 2e-07
Smith-Waterman score: 232; 22.0% identity (51.8% similar) in 328 aa overlap (212-521:13-332)

             190       200       210       220       230       240 
pF1KB9 NIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQN
                                     .::.. .        ..:: :.. .. . :
NP_005                   MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYN
                                 10        20        30        40  

              250       260       270       280        290         
pF1KB9 QNYVLKWD-YTYANMTFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVFPQNVFQ
        . ::.:.  . .: :  : .   :   .         .:  .: .. .:.: :     .
NP_005 AEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPS
             50        60        70        80        90       100  

     300            310       320       330        340       350   
pF1KB9 KGIYL-----LRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAP
        :. .     ::..:  :   : :     :.   .. . ::  ...     :. : ...:
NP_005 AGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP
            110       120       130       140       150       160  

           360       370       380       390       400       410   
pF1KB9 KQSGNTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDE
        . ..: .     . : . .::. .  . :   ....... ::::  :::....:. .  
NP_005 FDIADTSTAF---FCYYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL--
            170          180       190       200       210         

           420            430       440       450       460        
pF1KB9 KLNKSSVF-----SDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----
         :::..:     :.  : .:    ....  .. : .. :.:  :. .:  ::       
NP_005 -WNKSNIFRVGHLSNISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGL
        220       230       240       250       260       270      

           470       480       490       500       510       520   
pF1KB9 INYVFFPSLKPSSSIDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDED
       :.: :    .   .:.::... : . .: . ....  :  . ...: : .  : .: :  
NP_005 IKYWFHTPPSIPLQIEEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVL
        280       290        300       310       320        330    

           530       540       550       
pF1KB9 HKKYSSQTSQDSGNYSNEDESESKTSEELQQDFV
                                         
NP_005 QTL                               
                                         

>>XP_016866443 (OMIM: 605620) PREDICTED: interleukin-20   (554 aa)
 initn: 173 init1:  89 opt: 234  Z-score: 253.3  bits: 56.7 E(85289): 2.3e-07
Smith-Waterman score: 244; 26.2% identity (57.6% similar) in 229 aa overlap (11-223:18-240)

                      10          20        30        40        50 
pF1KB9        MMVVLLGATTLVLVAVAPW--VLSAAAGGKNLKSPQKVEVDIIDDNFILRWNR
                        :.:. .:::  ..  ..::  : .: ..    :. . .:.:. 
XP_016 MRAPGRPALRPLPLPPLLLLLLAAPWGRAVPCVSGG--LPKPANITFLSINMKNVLQWTP
               10        20        30          40        50        

               60         70        80        90       100         
pF1KB9 SDESVG-NVTFSFDY-QKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA-EK
        .   : .::.. .:  . :. .:.. : :.::. : :..:.   .  ..   ...:   
XP_016 PEGLQGVKVTYTVQYFIRYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYAKVKAIWG
       60        70        80        90       100       110        

      110       120       130       140             150            
pF1KB9 ENTSSWYEVDSFTPFRKAQIGPPEVHLEAEDKAI-VIHISP-----GTKD---SVMWALD
        . :.: :   : :: ..::::::: : ...:.: :.  .:     . .:   :..   .
XP_016 TKCSKWAESGRFYPFLETQIGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYS
      120       130       140       150       160       170        

     160       170       180       190         200       210       
pF1KB9 GLSFTYSLVIWKNSSGVEERIENIYSRHKIYK--LSPETTYCLKVKAALLTSWKIGVYSP
       .:... :..  :..    . . :    : .    : :.: ::..:.. .    . .  : 
XP_016 NLKYNVSVLNTKSNRTWSQCVTN----HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSE
      180       190       200           210       220       230    

       220       230       240       250       260       270       
pF1KB9 VHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKW
        .: .:                                                      
XP_016 KQCARTLKDQSSEFKAKIIFWYVLPVSITVFLFSVMGYSIYRYIHVGKEKHPANLILIYG
          240       250       260       270       280       290    

>>XP_011527856 (OMIM: 147569,614889) PREDICTED: interfer  (339 aa)
 initn: 157 init1:  81 opt: 226  Z-score: 248.1  bits: 55.0 E(85289): 4.4e-07
Smith-Waterman score: 226; 22.4% identity (52.4% similar) in 313 aa overlap (227-521:30-334)

        200       210       220       230       240        250     
pF1KB9 TYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWD-YTYANM
                                     ..:: :.. .. . : . ::.:.  . .: 
XP_011  MSTPSSSESVNLGMCCLTYKRDSADVNPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNS
                10        20        30        40        50         

         260       270       280        290       300              
pF1KB9 TFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVFPQNVFQKGIYL-----LRVQA
       :  : .   :   .         .:  .: .. .:.: :     . :. .     ::..:
XP_011 TRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRA
      60        70        80        90       100       110         

     310       320       330        340       350       360        
pF1KB9 SDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLI
         :   : :     :.   .. . ::  ...     :. : ...: . ..: .     . 
XP_011 ELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF---FC
     120       130       140       150       160       170         

      370       380       390       400       410       420        
pF1KB9 YEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVF-----SD
       : . .::. .  . :   ....... ::::  :::....:. .    :::..:     :.
XP_011 YYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL---WNKSNIFRVGHLSN
        180       190       200       210          220       230   

           430       440       450       460            470        
pF1KB9 AVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----INYVFFPSLKPSSSI
         : .:    ....  .. : .. :.:  :. .:  ::       :.: :    .   .:
XP_011 ISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQI
           240       250       260       270       280       290   

      480       490       500       510       520       530        
pF1KB9 DEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNY
       .::... : . .: . ....  :  . ...: : .  : .: :                 
XP_011 EEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVLQTL            
            300       310       320        330                     

      540       550       
pF1KB9 SNEDESESKTSEELQQDFV

>>NP_001316057 (OMIM: 147569,614889) interferon gamma re  (356 aa)
 initn: 157 init1:  81 opt: 226  Z-score: 247.8  bits: 55.0 E(85289): 4.6e-07
Smith-Waterman score: 226; 22.4% identity (52.4% similar) in 313 aa overlap (227-521:47-351)

        200       210       220       230       240        250     
pF1KB9 TYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWD-YTYANM
                                     ..:: :.. .. . : . ::.:.  . .: 
NP_001 AAAAAAPPAQLTLETYQEWCNDSAATHDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNS
         20        30        40        50        60        70      

         260       270       280        290       300              
pF1KB9 TFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVFPQNVFQKGIYL-----LRVQA
       :  : .   :   .         .:  .: .. .:.: :     . :. .     ::..:
NP_001 TRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRA
         80        90       100       110       120       130      

     310       320       330        340       350       360        
pF1KB9 SDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLI
         :   : :     :.   .. . ::  ...     :. : ...: . ..: .     . 
NP_001 ELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF---FC
        140       150       160       170       180       190      

      370       380       390       400       410       420        
pF1KB9 YEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVF-----SD
       : . .::. .  . :   ....... ::::  :::....:. .    :::..:     :.
NP_001 YYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL---WNKSNIFRVGHLSN
           200       210       220       230          240       250

           430       440       450       460            470        
pF1KB9 AVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----INYVFFPSLKPSSSI
         : .:    ....  .. : .. :.:  :. .:  ::       :.: :    .   .:
NP_001 ISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQI
              260       270       280       290       300       310

      480       490       500       510       520       530        
pF1KB9 DEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNY
       .::... : . .: . ....  :  . ...: : .  : .: :                 
NP_001 EEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVLQTL            
               320       330       340        350                  

      540       550       
pF1KB9 SNEDESESKTSEELQQDFV

>>XP_011527855 (OMIM: 147569,614889) PREDICTED: interfer  (362 aa)
 initn: 157 init1:  81 opt: 226  Z-score: 247.7  bits: 55.0 E(85289): 4.7e-07
Smith-Waterman score: 226; 22.4% identity (52.4% similar) in 313 aa overlap (227-521:53-357)

        200       210       220       230       240        250     
pF1KB9 TYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWD-YTYANM
                                     ..:: :.. .. . : . ::.:.  . .: 
XP_011 PKDVHALILRVREPGNVLPDVQKGLRRYPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNS
             30        40        50        60        70        80  

         260       270       280        290       300              
pF1KB9 TFQVQWLHAFLKRNPGNHLYKWKQIP-DCENVKTTQCVFPQNVFQKGIYL-----LRVQA
       :  : .   :   .         .:  .: .. .:.: :     . :. .     ::..:
XP_011 TRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRA
             90       100       110       120       130       140  

     310       320       330        340       350       360        
pF1KB9 SDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLI
         :   : :     :.   .. . ::  ...     :. : ...: . ..: .     . 
XP_011 ELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF---FC
            150       160       170       180       190            

      370       380       390       400       410       420        
pF1KB9 YEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVF-----SD
       : . .::. .  . :   ....... ::::  :::....:. .    :::..:     :.
XP_011 YYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLL---WNKSNIFRVGHLSN
     200       210       220       230       240          250      

           430       440       450       460            470        
pF1KB9 AVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRC-----INYVFFPSLKPSSSI
         : .:    ....  .. : .. :.:  :. .:  ::       :.: :    .   .:
XP_011 ISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQI
        260       270       280       290       300       310      

      480       490       500       510       520       530        
pF1KB9 DEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGNY
       .::... : . .: . ....  :  . ...: : .  : .: :                 
XP_011 EEYLKD-PTQPILEALDKDSSPKDDVWDSVSII-SFPEKEQEDVLQTL            
        320        330       340        350       360              

      540       550       
pF1KB9 SNEDESESKTSEELQQDFV




557 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 08:56:00 2016 done: Fri Nov  4 08:56:02 2016
 Total Scan time:  9.600 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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