(Linear) (Six-base) MAPSORT of: KIBB9910.seq Check: 5350 from: 1 to: 1770 KIBB9910.orf With 182 enzymes: SgfI * April 24, 2009 13:08 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1387 1514 1770 Size: 1387 127 256 Fragments arranged by size: 1387 256 127 AatII G_ACGT'C Cuts at: 0 1619 1770 Size: 1619 151 Acc65I G'GTAC_C Cuts at: 0 548 1690 1770 Size: 548 1142 80 Fragments arranged by size: 1142 548 80 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 217 431 509 1168 1303 1770 Size: 217 214 78 659 135 467 Fragments arranged by size: 659 467 217 214 135 78 AfeI AGC'GCT Cuts at: 0 799 1770 Size: 799 971 AflIII A'CryG_T Cuts at: 0 707 1770 Size: 707 1063 AleI CACnn'nnGTG Cuts at: 0 265 568 1606 1770 Size: 265 303 1038 164 Fragments arranged by size: 1038 303 265 164 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 818 1770 Size: 818 952 AlwNI CAG_nnn'CTG Cuts at: 0 875 1379 1392 1407 1770 Size: 875 504 13 15 363 Fragments arranged by size: 875 504 363 15 13 ApoI r'AATT_y Cuts at: 0 148 1770 Size: 148 1622 AvaI C'yCGr_G Cuts at: 0 158 603 886 1770 Size: 158 445 283 884 Fragments arranged by size: 884 445 283 158 BanI G'GyrC_C Cuts at: 0 19 548 1690 1770 Size: 19 529 1142 80 Fragments arranged by size: 1142 529 80 19 BanII G_rGCy'C Cuts at: 0 766 912 1038 1770 Size: 766 146 126 732 Fragments arranged by size: 766 732 146 126 BbeI G_GCGC'C Cuts at: 0 23 1770 Size: 23 1747 BbsI GAAGACnn'nnnn_ Cuts at: 0 1486 1770 Size: 1486 284 BclI T'GATC_A Cuts at: 0 368 1770 Size: 368 1402 BglI GCCn_nnn'nGGC Cuts at: 0 880 1770 Size: 880 890 Bme1580I G_kGCm'C Cuts at: 0 853 1770 Size: 853 917 BmgBI CAC'GTC Cuts at: 0 1455 1770 Size: 1455 315 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 122 209 1579 1690 1770 Size: 122 87 1370 111 80 Fragments arranged by size: 1370 122 111 87 80 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1489 1770 Size: 1489 281 BsaI GGTCTCn'nnnn_ Cuts at: 0 227 415 1096 1770 Size: 227 188 681 674 Fragments arranged by size: 681 674 227 188 BsaAI yAC'GTr Cuts at: 0 461 710 1770 Size: 461 249 1060 Fragments arranged by size: 1060 461 249 BsaHI Gr'CG_yC Cuts at: 0 20 824 1616 1770 Size: 20 804 792 154 Fragments arranged by size: 804 792 154 20 BsaWI w'CCGG_w Cuts at: 0 614 969 1770 Size: 614 355 801 Fragments arranged by size: 801 614 355 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 694 724 1643 1673 1770 Size: 694 30 919 30 97 Fragments arranged by size: 919 694 97 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 659 766 956 1616 1770 Size: 659 107 190 660 154 Fragments arranged by size: 660 659 190 154 107 BseYI C'CCAG_C Cuts at: 0 426 1445 1770 Size: 426 1019 325 Fragments arranged by size: 1019 426 325 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 346 814 1378 1770 Size: 346 468 564 392 Fragments arranged by size: 564 468 392 346 BsiEI CG_ry'CG Cuts at: 0 56 1770 Size: 56 1714 BsiHKAI G_wGCw'C Cuts at: 0 614 707 1237 1442 1770 Size: 614 93 530 205 328 Fragments arranged by size: 614 530 328 205 93 BsiWI C'GTAC_G Cuts at: 0 1082 1770 Size: 1082 688 BsmI GAATG_Cn' Cuts at: 0 142 1770 Size: 142 1628 Bsp1286I G_dGCh'C Cuts at: 0 614 707 766 853 912 1038 1237 1442 Size: 614 93 59 87 59 126 199 205 Cuts at: 1442 1770 Size: 328 Fragments arranged by size: 614 328 205 199 126 93 87 59 59 BspEI T'CCGG_A Cuts at: 0 614 1770 Size: 614 1156 BspHI T'CATG_A Cuts at: 0 819 1770 Size: 819 951 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 293 318 1387 1514 1678 1770 Size: 293 25 1069 127 164 92 Fragments arranged by size: 1069 293 164 127 92 25 BsrDI GCAATG_nn' Cuts at: 0 1277 1619 1770 Size: 1277 342 151 Fragments arranged by size: 1277 342 151 BtgI C'CryG_G Cuts at: 0 696 1770 Size: 696 1074 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 1668 1770 Size: 1668 102 BtsI GCAGTG_nn' Cuts at: 0 1483 1740 1770 Size: 1483 257 30 Fragments arranged by size: 1483 257 30 DraI TTT'AAA Cuts at: 0 1026 1770 Size: 1026 744 DrdI GACnn_nn'nnGTC Cuts at: 0 931 1770 Size: 931 839 EaeI y'GGCC_r Cuts at: 0 53 81 290 1770 Size: 53 28 209 1480 Fragments arranged by size: 1480 209 53 28 EagI C'GGCC_G Cuts at: 0 53 1770 Size: 53 1717 EarI CTCTTCn'nnn_ Cuts at: 0 193 352 1770 Size: 193 159 1418 Fragments arranged by size: 1418 193 159 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 122 209 217 431 509 1168 1303 1579 Size: 122 87 8 214 78 659 135 276 Cuts at: 1579 1690 1770 Size: 111 80 Fragments arranged by size: 659 276 214 135 122 111 87 80 78 8 EcoNI CCTnn'n_nnAGG Cuts at: 0 867 1770 Size: 867 903 EcoO109I rG'GnC_Cy Cuts at: 0 468 872 1208 1404 1770 Size: 468 404 336 196 366 Fragments arranged by size: 468 404 366 336 196 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 673 1770 Size: 673 1097 FspI TGC'GCA Cuts at: 0 775 1770 Size: 775 995 HaeII r_GCGC'y Cuts at: 0 23 801 1770 Size: 23 778 969 Fragments arranged by size: 969 778 23 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 1115 1135 1147 1167 1770 Size: 1115 20 12 20 603 Fragments arranged by size: 1115 603 20 20 12 HincII GTy'rAC Cuts at: 0 1154 1770 Size: 1154 616 HindIII A'AGCT_T Cuts at: 0 529 1423 1770 Size: 529 894 347 Fragments arranged by size: 894 529 347 KasI G'GCGC_C Cuts at: 0 19 1770 Size: 19 1751 KpnI G_GTAC'C Cuts at: 0 552 1694 1770 Size: 552 1142 76 Fragments arranged by size: 1142 552 76 MslI CAynn'nnrTG Cuts at: 0 265 568 955 1606 1762 1770 Size: 265 303 387 651 156 8 Fragments arranged by size: 651 387 303 265 156 8 MspA1I CmG'CkG Cuts at: 0 265 769 856 1326 1413 1449 1770 Size: 265 504 87 470 87 36 321 Fragments arranged by size: 504 470 321 265 87 87 36 NarI GG'CG_CC Cuts at: 0 20 1770 Size: 20 1750 NspI r_CATG'y Cuts at: 0 584 1770 Size: 584 1186 PasI CC'CwG_GG Cuts at: 0 869 1770 Size: 869 901 PflMI CCAn_nnn'nTGG Cuts at: 0 1077 1770 Size: 1077 693 PfoI T'CCnGG_A Cuts at: 0 998 1667 1770 Size: 998 669 103 Fragments arranged by size: 998 669 103 PmlI CAC'GTG Cuts at: 0 461 1770 Size: 461 1309 PpuMI rG'GwC_Cy Cuts at: 0 468 1404 1770 Size: 468 936 366 Fragments arranged by size: 936 468 366 PshAI GACnn'nnGTC Cuts at: 0 827 1770 Size: 827 943 PsiI TTA'TAA Cuts at: 0 479 1770 Size: 479 1291 PstI C_TGCA'G Cuts at: 0 1331 1412 1770 Size: 1331 81 358 Fragments arranged by size: 1331 358 81 PvuII CAG'CTG Cuts at: 0 856 1326 1413 1449 1770 Size: 856 470 87 36 321 Fragments arranged by size: 856 470 321 87 36 SfcI C'TryA_G Cuts at: 0 1327 1408 1770 Size: 1327 81 362 Fragments arranged by size: 1327 362 81 SfoI GGC'GCC Cuts at: 0 21 1770 Size: 21 1749 SmaI CCC'GGG Cuts at: 0 160 1770 Size: 160 1610 SmlI C'TyrA_G Cuts at: 0 603 1468 1770 Size: 603 865 302 Fragments arranged by size: 865 603 302 SpeI A'CTAG_T Cuts at: 0 1218 1770 Size: 1218 552 SphI G_CATG'C Cuts at: 0 584 1770 Size: 584 1186 StyI C'CwwG_G Cuts at: 0 845 1312 1770 Size: 845 467 458 Fragments arranged by size: 845 467 458 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 1264 1278 1770 Size: 1264 14 492 Fragments arranged by size: 1264 492 14 TatI w'GTAC_w Cuts at: 0 1524 1770 Size: 1524 246 XhoI C'TCGA_G Cuts at: 0 603 1770 Size: 603 1167 XmaI C'CCGG_G Cuts at: 0 158 1770 Size: 158 1612 XmnI GAAnn'nnTTC Cuts at: 0 1175 1770 Size: 1175 595 ZraI GAC'GTC Cuts at: 0 1617 1770 Size: 1617 153 Enzymes that do cut: AarI AatII Acc65I AcuI AfeI AflIII AleI AlfI AlwNI ApoI AvaI BanI BanII BbeI BbsI BclI BglI Bme1580I BmgBI BpmI BpuEI BsaI BsaAI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsiWI BsmI Bsp1286I BspEI BspHI BspMI BsrDI BtgI BtgZI BtsI DraI DrdI EaeI EagI EarI Eco57MI EcoNI EcoO109I FalI FspI HaeII Hin4I HincII HindIII KasI KpnI MslI MspA1I NarI NspI PasI PflMI PfoI PmlI PpuMI PshAI PsiI PstI PvuII SfcI SfoI SmaI SmlI SpeI SphI StyI TaqII TatI XhoI XmaI XmnI ZraI Enzymes that do not cut: AccI AclI AflII AgeI AhdI AloI ApaI ApaLI AscI AseI AsiSI AvrII BaeI BamHI BbvCI BcgI BciVI BfrBI BglII BlpI BmrI BmtI BplI Bpu10I BsaBI BsmBI BsrBI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BstZ17I Bsu36I ClaI CspCI DraIII EciI EcoICRI EcoRI EcoRV FseI FspAI HpaI MfeI MluI MmeI MscI NaeI NcoI NdeI NgoMIV NheI NotI NruI NsiI PacI PciI PmeI PpiI PspOMI PspXI PsrI PvuI RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfiI SgfI SgrAI SnaBI SrfI SspI StuI SwaI TstI Tth111I XbaI XcmI