GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:46:40

Sequence gi568815581f:58592644_58834219 : 241576 bp : 42.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.18 Intr -   1018    912  107  1  2   50   80    98 0.045   3.29
 1.17 Intr -   7023   6110  914  1  2   84   91   751 0.093  65.05
 1.16 Intr -   9313   9163  151  1  1  105   47   190 0.917  15.41
 1.15 Intr -   9947   9742  206  0  2  115  -73   145 0.494  -0.90
 1.14 Intr -  12486  12335  152  2  2   80   76   100 0.843   6.89
 1.13 Intr -  18696  18518  179  0  2   76   86    96 0.425   6.00
 1.12 Intr -  20901  20778  124  2  1  106    3   100 0.298   2.97
 1.11 Intr -  22702  22589  114  0  0  100   94    69 0.371   7.34
 1.10 Intr -  23662  23532  131  1  2   57  108   141 0.916  11.57
 1.09 Intr -  24976  24895   82  0  1   77  116    31 0.805   3.52
 1.08 Intr -  29143  29007  137  1  2   57   84   142 0.378   9.15
 1.07 Intr -  30369  30204  166  2  1   92  110   235 0.959  25.14
 1.06 Intr -  37911  37797  115  1  1   96   89    78 0.969   7.29
 1.05 Intr -  39551  39440  112  2  1   34   12   191 0.842   5.13
 1.04 Intr -  55469  55349  121  1  1   84   55    94 0.816   5.28
 1.03 Intr -  56032  55866  167  1  2   47   80    55 0.638  -1.56
 1.02 Intr -  59359  59143  217  0  1   77   86   173 0.470  13.58
 1.01 Init -  62231  62158   74  2  2   68   80    26 0.319   0.39
 1.00 Prom -  66896  66857   40                              -4.85

 2.03 PlyA -  67800  67795    6                               1.05
 2.02 Term -  69051  67934 1118  1  2   69   33  1261 0.457 109.90
 2.01 Init -  75645  75555   91  0  1   81   78    69 0.200   5.90
 2.00 Prom -  88804  88765   40                              -3.65

 3.00 Prom +  94072  94111   40                              -5.05
 3.01 Init + 100001 100145  145  1  1   62   92   117 0.894   9.98
 3.02 Intr + 100229 100316   88  0  1   73   25   107 0.338   1.01
 3.03 Intr + 104050 104216  167  1  2   52  110   175 0.654  14.78
 3.04 Intr + 110553 110686  134  1  2   84   86    78 0.995   6.64
 3.05 Intr + 113846 113965  120  1  0   85   95    17 0.781   1.87
 3.06 Intr + 117216 117347  132  2  0   85   87    84 0.836   7.92
 3.07 Intr + 128103 128169   67  2  1  112   80    31 0.232   2.26
 3.08 Term + 148953 149056  104  1  2   65   42   124 0.507   2.96
 3.09 PlyA + 149167 149172    6                               1.05

 4.00 Prom + 162052 162091   40                              -3.55
 4.01 Sngl + 163355 163819  465  1  0  104   33   836 0.999  75.59
 4.02 PlyA + 165365 165370    6                               1.05

 5.03 PlyA - 165385 165380    6                               1.05
 5.02 Term - 199003 198830  174  1  0   50   53   132 0.308   2.68
 5.01 Intr - 230762 230711   52  1  1   58  108    42 0.137   1.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   7023   6101  923  1  2   84   48   758 0.902  62.76
S.002 Init +  85887  85947   61  2  1   83   50    43 0.900   1.46
S.003 Term +  86811  87043  233  1  2   36   42   159 0.934   1.75
S.004 Sngl - 174571 174404  168  1  0   61   54   146 0.844   3.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:58592644_58834219|GENSCAN_predicted_peptide_1|1090_aa
MRSSFLFSQSNNEIQTGKEGSLLARMSRAVRLPVPCPVQLGTLRNDSLEAQLHEYVKQGN
YVKVKKILKKGKHHVEMADAPWYTFLNSVQRKRNVIKAREMRPESQPAVQLKYVSLPQAA
TRVTHQEAAVFPGVEEARRLLSVSYLEQSLMGGSGVATNSVEIRGRVEKQGGELTEHCCI
LQCGGGKKLESAWGLLASDHQSKPGSFPDGFWRSGALYSRQRYAWRKMGRGIYVDAVNSL
GQTALFVAALLGLRKFVDVLVDYGSDPNHRCFDGSTPVHAAAFSGNQWILSKLLDAGGDL
RLHDERGQNPKTWALTAGKERSTQIVEFMQRCASHMQAIIQGFSYDLLKKIDSPQRLVYS
PSWCGGLVQGNPNGSPNRLLKAGVISAQNIYSFGFGKFYLTGATQMAYLGSLPVIGEKEV
IQADDEPTFSFFSGPYMVMTNLVWNGSRVTVKELNLPTHPHCSRLRLADLLIAEQEHSSK
LRHPYLLQLMAVCLSQDLEKTRLVYERITIGTLFSVLHERRSQFPVLHMEVIVHLLLQIS
DALRYLHFQGFIHRSLSSYAVHIISPGEARLTNLEYMLESEDRGVQRDLTRVPLPTQLYN
WAAPEVILQKAATVKSDIYSFSMIMQEILTDDIPWKGLDGSVVKKAVVSGNYLEADVRLP
KPYYDIVKSGIHVKQKDRTMNLQDIRYILKNDLKASPEVDFTGAQRTQPTESPRVQRYGL
HPDVNVYLGLTSEHPRETPDMEIIELKEMGSQPHSPRVHSLFTEGTLDPQAPDPCLMARE
TQNQDAPCPAPFMAEEASSPSTGQPSLCSFEINEIYSGCLILEDDIEEPPGAASSLEADG
PNQVDELKSMEEELDKMEREACCFGSEDESSSKAETEYSFDDWDWQNGSLSSLSLPESTR
EAKSNLNNMSTTEEYLISKCVLDLKIMQTIMHENDDRLRNIEQILDEVEMKQKEQEERMS
LWATSREFTNAYKLPLAVGPPSLNYIPPVLQLSGGQKPDTSGNYPTLPRFPRMVRDFQGG
HFGKRSRKRNGCGWKPFTQVSKVNTGDQSEISHQLPTLCDPGKQNTDEQFQCTQGAKDSL
ETSRIQNTSS

>gi568815581f:58592644_58834219|GENSCAN_predicted_CDS_1|3270_bp
atgaggtccagcttcttgttctcacagtccaataatgagatccagactgggaaagaaggg
agtttattggccaggatgtctcgggctgttcgtcttccagtcccctgtcctgttcaactt
ggtaccttaagaaatgactccctggaagctcagcttcatgagtatgtcaaacaagggaac
tatgtgaaagtgaagaaaattcttaagaaaggtaagcaccatgttgagatggcagatgca
ccttggtacacatttctgaatagcgttcagaggaaaaggaatgtcataaaggcaagagag
atgagacctgagtcccagcctgctgtacagttgaaatatgtcagcctaccccaagctgcc
accagagtgacacaccaagaagctgcagtgttccctggagttgaggaggcaagaagactg
ctatctgtctcctacttggagcagtccttgatgggtggctctggagttgccacaaacagc
gttgagatcagaggaagagtggagaagcaaggaggagaattaacagagcattgctgcatc
ctgcagtgcggaggagggaagaaattggaatcggcctggggccttcttgcttccgatcat
cagtccaaaccgggcagtttccctgacggtttctggcgctccggcgcgctttatagtcgt
cagcgttacgcgtggaggaaaatggggcggggaatttatgttgatgcagttaactccttg
ggccaaacagcactttttgttgcggcgttattgggccttaggaaattcgttgatgttctg
gtggattatggatcagatccaaatcaccgctgctttgatgggagcacccctgtccatgca
gcagcattttcgggcaatcagtggatccttagcaaactgctggatgcaggaggtgacctg
cgactccacgatgagaggggtcaaaacccgaagacttgggctttgacagcaggaaaggag
cgtagcacccagatagtggagttcatgcagcgctgtgcctcacacatgcaggccatcatc
cagggcttctcttacgacctcctgaagaagatagactccccgcagcggcttgtctacagc
ccgtcctggtgtgggggcctcgtgcagggaaaccctaatggctctcctaaccgactgctt
aaagctggagtcatttctgctcaaaatatctacagctttggttttgggaagttttatctt
actggggcgacacagatggcctatctaggatctcttccggtcattggagaaaaggaagtg
attcaagctgatgatgagcccaccttctctttcttcagcggcccctacatggtcatgacc
aacctagtgtggaatgggagcagggtcacagtgaaagagctgaatctccccacccaccca
cactgcagcaggctgcggctggccgacttgttaattgccgagcaggaacacagcagcaag
ctgcggcacccctacttgctacagttgatggctgtgtgtctctcccaggacctagagaaa
acccgccttgtgtacgagcgcatcactatcggcacattgttcagtgtccttcatgaacga
cggtcccagttcccagtgctgcacatggaggtgattgtgcacctgctgctccagatatct
gatgccctgagatacctgcatttccaggggtttatccaccgctccctcagctcctatgct
gtccatatcatctccccaggtgaagcgaggctgaccaacctggagtacatgttggaaagc
gaggacagaggtgtacagagggacctgactcgagtgccccttcctacgcagctatacaac
tgggccgcaccagaagtgatcttacagaaggcagccacagtgaaatcagacatctacagc
ttttctatgatcatgcaggagattttaacagatgacataccctggaagggcttagatggc
tcagttgttaaaaaagccgtagtctcggggaattatttagaagctgatgtcaggcttccg
aaaccttactatgatattgttaagtcaggcatccacgtcaagcagaaagaccgaactatg
aaccttcaagatatccggtatattctgaagaatgacttaaaggcaagccctgaagttgat
tttactggagcccagagaactcaaccaaccgagagccccagagtgcagagatacggactc
catcccgatgtcaatgtctatctaggactgacttcagaacaccccagagagacacctgac
atggaaatcatagaactaaaggaaatgggcagtcaacctcattcaccaagggttcactct
ttattcactgaggggacactagatcctcaggccccagatccatgtctgatggccagggag
actcagaatcaagatgctccttgccctgctccatttatggcagaagaggccagcagcccc
agcacaggtcagccaagcctctgcagtttcgaaatcaacgagatctactcaggctgcttg
attttggaagatgacatagaagagcctccaggagctgcttcatctttggaggcagacgga
cctaaccaggtagatgaactgaaatccatggaagaagagctggataagatggagagagag
gcgtgttgttttggcagtgaggatgagagctcttcaaaagctgagacagagtactctttt
gatgactgggactggcaaaacggttcactcagttcactcagccttcctgagtcaaccaga
gaagccaagagcaatttgaacaacatgtccacgactgaggagtatctcatcagtaagtgt
gtgctggatctaaagattatgcagacaataatgcacgagaatgatgataggctgaggaat
atcgagcagatattagatgaagtcgagatgaaacagaaggaacaggaagagcgcatgtct
ttatgggccacttcaagagagtttacaaatgcctacaagttacctctggccgtgggccct
ccatctttaaactatattcctcctgtcctacagctttcagggggtcagaagccagacacc
agtggcaactacccaaccctaccaagatttccaagaatggtaagagactttcaaggggga
cattttggcaaaagatccaggaaaagaaatggttgtggctggaaacctttcacccaagtc
tccaaagtaaacactggggatcagtcagagataagccatcagctgccgactctttgtgac
cctggaaaacagaacacagatgaacaatttcagtgcactcaaggagccaaggacagtttg
gaaacaagcaggatccaaaataccagtagn

>gi568815581f:58592644_58834219|GENSCAN_predicted_peptide_2|402_aa
MGSCSGGERLGTSPKYSMGKWEFVAKEQCGAPDSDWLLEIYARIFTCVQKGKESTFRISL
PKMAAAEDEFLPPPRLPELFDSSKQLLDEVEGATEPTGSRIVQEKVFKGLDLLDKVAKML
SQLDLFSRNEDLEEITSTDLKYLMVPAFQGALTMKQVNPRKRLDHLQQAREHFIKYLTQC
HYYRVAEFELPQTKTNSAENHGAITSTAYPSLVAMASQRQAKIERYKQKKVLEHKLSTMK
SAVESGQADNERVREYYLLHLQRWIDISLEEIESIDQEIKILGEKDSSREASTSNSCHQK
RPPMKPFILTRNMAQAKVFGAGYPSLASMTVSDWYDQHQKHGVLPDQGIAKATPEEFRKA
TQQQEDQEKEEEDDEQTLQRAREWDDWKDTHPRGYGNRQNMG

>gi568815581f:58592644_58834219|GENSCAN_predicted_CDS_2|1209_bp
atggggtcttgtagtggaggagaaagactgggcacaagtccaaagtacagcatgggcaaa
tgggaatttgtagccaaggagcagtgtggagcgcccgattcagactggttgttagaaatc
tacgccagaatctttacgtgtgtccagaaaggaaaggaatcaacatttcgcatcagcctt
cccaagatggcagctgctgaagacgagttcctgccgccgccgcggctccccgagctgttc
gattccagcaaacagcttctggacgaagtcgaaggagcgactgaacccaccggttcccga
atagtccaggaaaaggtgttcaagggcctcgacctccttgacaaggttgccaaaatgtta
tcgcagcttgacttgttcagccgaaatgaagatttggaggagattacttccaccgacctg
aagtacctgatggtgccagcgtttcaaggagccctcaccatgaaacaagtcaacccccgt
aagcgtctagatcatttgcagcaggctcgcgaacactttataaaatacttaactcagtgc
cattactatcgtgtggccgagtttgagctgccccaaaccaagaccaactcagctgaaaat
cacggtgctattacctccacggcttatcctagcctcgttgctatggcatctcaaagacag
gctaaaatagagcgatacaagcagaagaaggtgttggagcataagttgtctacaatgaaa
tctgctgtggaaagtggtcaagcagataatgagcgtgttcgtgaatattatcttcttcac
cttcagaggtggattgatatcagcttagaagagattgagagcattgatcaggaaataaag
atcctgggagagaaagactcttcaagagaggcatccacttctaactcatgtcaccagaag
aggcctccaatgaaacccttcattctcactcggaacatggcgcaagccaaagtatttggc
gctggctatccaagtctggcttccatgacagtgagtgactggtatgatcaacatcagaaa
catggagtgttaccagatcagggaatagccaaggcaacaccagaagaattcagaaaagcc
actcagcaacaggaagatcaagaaaaggaggaagaggatgatgaacaaacactccaaaga
gctcgagagtgggatgactggaaggacacccaccctaggggctacggcaaccgacagaac
atgggctaa

>gi568815581f:58592644_58834219|GENSCAN_predicted_peptide_3|318_aa
MRGKTFRFEMQRDLVSFPLSPAVRVKLVSAGFQTAEELLEVKPSELSKAQSPLDSASSHV
HVYSVKELLDSTYKLSECMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACI
QHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKAH
CSSRITLLLCGVALPLPLSARAPPSETKDDIALPPGLMVRLVIVDGIAFPFRHDLDDLSL
RTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALAVALDSHSPNRIVNCA
YKESRLHAPYDNLMPDDL

>gi568815581f:58592644_58834219|GENSCAN_predicted_CDS_3|957_bp
atgcgcgggaagacgttccgctttgaaatgcagcgggatttggtgagtttcccgctgtct
ccagcggtgcgggtgaagctggtgtctgcggggttccagactgctgaggaactcctagag
gtgaaaccctccgagcttagcaaagcccagtctccgttagattctgcttcctcccacgtc
catgtttacagcgtgaaagagctcctcgactccacttacaagttgtctgaatgtatgcag
ttggcagtagatgtgcagataccagaatgttttggaggagtggcaggtgaagcagttttt
attgatacagagggaagttttatggttgatagagtggtagaccttgctactgcctgcatt
cagcaccttcagcttatagcagaaaaacacaagggagaggaacaccgaaaagctttggag
gatttcactcttgataatattctttctcatatttattattttcgctgtcgtgactacaca
gagttactggcacaagtttatcttcttccagatttcctttcagaacactcaaaggcccac
tgcagtagcagaatcaccctactgctctgtggggtggccctgccccttcctctctctgca
agggccccaccctctgaaaccaaggacgacatagcattgccccctgggcttatggttcga
ctagtgatagtggatggtattgcttttccatttcgtcatgacctagatgacctgtctctt
cgtactcggttattaaatggcctagcccagcaaatgatcagccttgcaaataatcacaga
ttagctgtaattttaaccaatcagatgacaacaaagattgatagaaatcaggccttgctt
gttcctgcattagcagtggcattagattctcatagcccgaaccgtatcgtgaactgtgca
tacaaggaatctaggttgcatgctccttatgataatctaatgcctgatgatctgtga

>gi568815581f:58592644_58834219|GENSCAN_predicted_peptide_4|154_aa
MAGCIPEEKTYRRFLELFLGEFRGPCGGGEPEPEPEPEPEPEPESEPEPEPELVEAEAAE
ASVEEPGEEAATVAATEEGDQEQDPEPEEEAAVEGEEEEEGAATAAAAPGHSAVPPPPPQ
LPPLPPLPRPLSERITREEVEGESLDLCLQQLYK

>gi568815581f:58592644_58834219|GENSCAN_predicted_CDS_4|465_bp
atggccggctgcatccctgaggagaaaacttaccggcgcttcctggagctattcctgggc
gagtttcgcggaccgtgcggcggcggcgagccggagccggaacccgaacccgaacccgaa
cccgaacccgagtccgagcccgagcccgaacctgaactggtagaagctgaggcggccgag
gcttcggtagaggaacccggggaggaggcggccacggtagccgcgacggaggagggggac
caggagcaagacccggagcccgaggaggaggcggcggttgagggtgaggaggaggaggag
ggcgcggcgacggcggcggcagccccggggcactcggccgtgccgccgccgccgccccag
ctgccgcctttgcccccgctcccgcgaccgctgtcagagcgcatcacccgcgaggaggtg
gagggcgaaagcctggacctgtgcctgcagcagctctacaaatag

>gi568815581f:58592644_58834219|GENSCAN_predicted_peptide_5|75_aa
XEQRYHNPEKPFLCLEFQVFSPENLEFCAWVGCGIPIQVDKEESFAVNKVILNLFGVTDF
SETLIKGLRYYFRRY

>gi568815581f:58592644_58834219|GENSCAN_predicted_CDS_5|228_bp
nnagaacagcgttatcacaatcctgagaaaccattcctgtgcctagaatttcaagtattc
agtccagaaaacctggaattttgtgcttgggtaggatgtggtattcctatacaagtggat
aaagaggaaagttttgctgttaataaagtaattcttaacctttttggagttacggacttc
tctgagacactaataaaaggtcttcgttattacttcagaagatattga