Result of FASTA (omim) for
pF1KB6565
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6565, 374 aa
1>>>pF1KB6565 374 - 374 aa - 374 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5274+/-0.000386; mu= 15.7167+/- 0.024
mean_var=87.3202+/-18.620, 0's: 0 Z-trim(114.4): 170 B-trim: 1326 in 2/51
Lambda= 0.137251
statistics sampled from 23981 (24225) to 23981 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.284), width: 16
Scan time: 7.570
The best scores are: opt bits E(85289)
NP_006860 (OMIM: 608114) arf-GAP with dual PH doma ( 374) 2611 527.2 2.4e-149
NP_001271237 (OMIM: 608114) arf-GAP with dual PH d ( 385) 2426 490.5 2.7e-138
NP_001271239 (OMIM: 608114) arf-GAP with dual PH d ( 302) 2107 427.3 2.3e-119
NP_001271238 (OMIM: 608114) arf-GAP with dual PH d ( 302) 2107 427.3 2.3e-119
NP_001271240 (OMIM: 608114) arf-GAP with dual PH d ( 279) 1896 385.5 8.1e-107
NP_060874 (OMIM: 608635) arf-GAP with dual PH doma ( 381) 1570 321.0 2.8e-87
XP_016867224 (OMIM: 616813) PREDICTED: arf-GAP wit ( 462) 340 77.5 6.7e-14
XP_016867222 (OMIM: 616813) PREDICTED: arf-GAP wit ( 527) 340 77.6 7.4e-14
XP_005250000 (OMIM: 616813) PREDICTED: arf-GAP wit ( 565) 340 77.6 7.8e-14
XP_016867223 (OMIM: 616813) PREDICTED: arf-GAP wit ( 580) 340 77.6 7.9e-14
NP_001268229 (OMIM: 616813) arf-GAP with GTPase, A ( 580) 340 77.6 7.9e-14
XP_016867221 (OMIM: 616813) PREDICTED: arf-GAP wit ( 630) 340 77.7 8.5e-14
XP_011514082 (OMIM: 616813) PREDICTED: arf-GAP wit ( 683) 340 77.7 9e-14
NP_114152 (OMIM: 616813) arf-GAP with GTPase, ANK ( 911) 340 77.8 1.1e-13
NP_073570 (OMIM: 616916) stromal membrane-associat ( 429) 331 75.7 2.2e-13
NP_055531 (OMIM: 607763) arf-GAP with coiled-coil, ( 740) 334 76.5 2.2e-13
XP_005248817 (OMIM: 611372) PREDICTED: stromal mem ( 250) 326 74.6 2.9e-13
XP_011534349 (OMIM: 611372) PREDICTED: stromal mem ( 429) 326 74.7 4.3e-13
NP_001268368 (OMIM: 611372) stromal membrane-assoc ( 436) 326 74.8 4.4e-13
NP_068759 (OMIM: 611372) stromal membrane-associat ( 440) 326 74.8 4.4e-13
XP_011534347 (OMIM: 611372) PREDICTED: stromal mem ( 456) 326 74.8 4.5e-13
NP_001037770 (OMIM: 611372) stromal membrane-assoc ( 467) 326 74.8 4.6e-13
NP_055585 (OMIM: 605476) arf-GAP with GTPase, ANK ( 836) 326 75.0 7.2e-13
XP_005268683 (OMIM: 605476) PREDICTED: arf-GAP wit ( 856) 326 75.0 7.3e-13
XP_005268682 (OMIM: 605476) PREDICTED: arf-GAP wit (1172) 326 75.1 9.3e-13
NP_001116244 (OMIM: 605476) arf-GAP with GTPase, A (1192) 326 75.1 9.4e-13
XP_016874261 (OMIM: 605476) PREDICTED: arf-GAP wit (1192) 326 75.1 9.4e-13
XP_011510908 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 313 72.4 4e-12
XP_011510907 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 313 72.4 4e-12
XP_011510906 (OMIM: 607766) PREDICTED: arf-GAP wit ( 776) 313 72.4 4e-12
NP_036419 (OMIM: 607766) arf-GAP with coiled-coil, ( 778) 313 72.4 4e-12
XP_006713620 (OMIM: 607766) PREDICTED: arf-GAP wit ( 785) 313 72.4 4.1e-12
XP_016861538 (OMIM: 607766) PREDICTED: arf-GAP wit ( 806) 313 72.4 4.2e-12
XP_011510905 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 313 72.4 4.2e-12
XP_016861537 (OMIM: 607766) PREDICTED: arf-GAP wit ( 813) 313 72.4 4.2e-12
XP_011510904 (OMIM: 607766) PREDICTED: arf-GAP wit ( 820) 313 72.4 4.2e-12
XP_016861536 (OMIM: 607766) PREDICTED: arf-GAP wit ( 841) 313 72.4 4.3e-12
XP_016861535 (OMIM: 607766) PREDICTED: arf-GAP wit ( 848) 313 72.4 4.3e-12
NP_055729 (OMIM: 608651) arf-GAP with GTPase, ANK ( 804) 304 70.6 1.4e-11
XP_005246116 (OMIM: 608651) PREDICTED: arf-GAP wit ( 808) 304 70.6 1.4e-11
NP_001032208 (OMIM: 608651) arf-GAP with GTPase, A ( 857) 304 70.6 1.5e-11
XP_006712298 (OMIM: 608651) PREDICTED: arf-GAP wit ( 882) 304 70.6 1.5e-11
XP_006712297 (OMIM: 608651) PREDICTED: arf-GAP wit ( 886) 304 70.6 1.5e-11
XP_011508851 (OMIM: 608651) PREDICTED: arf-GAP wit (1073) 304 70.7 1.8e-11
XP_011508850 (OMIM: 608651) PREDICTED: arf-GAP wit (1098) 304 70.7 1.8e-11
XP_016858771 (OMIM: 608651) PREDICTED: arf-GAP wit (1106) 304 70.7 1.8e-11
XP_011508849 (OMIM: 608651) PREDICTED: arf-GAP wit (1126) 304 70.7 1.8e-11
XP_006712300 (OMIM: 608651) PREDICTED: arf-GAP wit (1147) 304 70.7 1.9e-11
XP_006712302 (OMIM: 608651) PREDICTED: arf-GAP wit (1151) 304 70.7 1.9e-11
XP_016868958 (OMIM: 605953) PREDICTED: arf-GAP wit (1072) 291 68.1 1.1e-10
>>NP_006860 (OMIM: 608114) arf-GAP with dual PH domain-c (374 aa)
initn: 2611 init1: 2611 opt: 2611 Z-score: 2802.1 bits: 527.2 E(85289): 2.4e-149
Smith-Waterman score: 2611; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374)
10 20 30 40 50 60
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
310 320 330 340 350 360
370
pF1KB6 PQEYAVEAHFKHKP
::::::::::::::
NP_006 PQEYAVEAHFKHKP
370
>>NP_001271237 (OMIM: 608114) arf-GAP with dual PH domai (385 aa)
initn: 2422 init1: 2422 opt: 2426 Z-score: 2604.0 bits: 490.5 E(85289): 2.7e-138
Smith-Waterman score: 2426; 97.8% identity (98.0% similar) in 358 aa overlap (21-374:28-385)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAP----DPDWASYTLGVFICLSCSGIHR
::. : ::::::::::::::::::::::
NP_001 MFQFVFSRVYCINPARRKWKEFEKMLGCAEEGHASLGRDPDWASYTLGVFICLSCSGIHR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB6 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB6 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB6 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB6 FHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB6 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
310 320 330 340 350 360
350 360 370
pF1KB6 AFQKAVDRPMLPQEYAVEAHFKHKP
:::::::::::::::::::::::::
NP_001 AFQKAVDRPMLPQEYAVEAHFKHKP
370 380
>>NP_001271239 (OMIM: 608114) arf-GAP with dual PH domai (302 aa)
initn: 2107 init1: 2107 opt: 2107 Z-score: 2264.0 bits: 427.3 E(85289): 2.3e-119
Smith-Waterman score: 2107; 100.0% identity (100.0% similar) in 302 aa overlap (73-374:1-302)
50 60 70 80 90 100
pF1KB6 SCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQ
::::::::::::::::::::::::::::::
NP_001 MASHGNDAARARFESKVPSFYYRPTPSDCQ
10 20 30
110 120 130 140 150 160
pF1KB6 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
220 230 240 250 260 270
350 360 370
pF1KB6 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
::::::::::::::::::::::::::::::::
NP_001 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
280 290 300
>>NP_001271238 (OMIM: 608114) arf-GAP with dual PH domai (302 aa)
initn: 2107 init1: 2107 opt: 2107 Z-score: 2264.0 bits: 427.3 E(85289): 2.3e-119
Smith-Waterman score: 2107; 100.0% identity (100.0% similar) in 302 aa overlap (73-374:1-302)
50 60 70 80 90 100
pF1KB6 SCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQ
::::::::::::::::::::::::::::::
NP_001 MASHGNDAARARFESKVPSFYYRPTPSDCQ
10 20 30
110 120 130 140 150 160
pF1KB6 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
40 50 60 70 80 90
170 180 190 200 210 220
pF1KB6 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
100 110 120 130 140 150
230 240 250 260 270 280
pF1KB6 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
160 170 180 190 200 210
290 300 310 320 330 340
pF1KB6 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
220 230 240 250 260 270
350 360 370
pF1KB6 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
::::::::::::::::::::::::::::::::
NP_001 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
280 290 300
>>NP_001271240 (OMIM: 608114) arf-GAP with dual PH domai (279 aa)
initn: 1896 init1: 1896 opt: 1896 Z-score: 2038.7 bits: 385.5 E(85289): 8.1e-107
Smith-Waterman score: 1896; 99.6% identity (100.0% similar) in 273 aa overlap (102-374:7-279)
80 90 100 110 120 130
pF1KB6 FMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGY
.:::::::::::::::::::::::::::::
NP_001 MVLASLELLREQWIRAKYERQEFIYPEKQEPYSAGY
10 20 30
140 150 160 170 180 190
pF1KB6 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
40 50 60 70 80 90
200 210 220 230 240 250
pF1KB6 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSR
100 110 120 130 140 150
260 270 280 290 300 310
pF1KB6 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB6 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
220 230 240 250 260 270
pF1KB6 HKP
:::
NP_001 HKP
>>NP_060874 (OMIM: 608635) arf-GAP with dual PH domain-c (381 aa)
initn: 1544 init1: 740 opt: 1570 Z-score: 1688.0 bits: 321.0 E(85289): 2.8e-87
Smith-Waterman score: 1570; 58.8% identity (84.1% similar) in 364 aa overlap (3-361:4-366)
10 20 30 40 50
pF1KB6 MAKER-RRAVLELLQRP--GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSK
.:: .. .::::. : :::.:::::: ::::::: ::.::::.: :.:::.:..:.
NP_060 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB6 VKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQ
::::::: :... :::: .:: ..:.::..::.::: : .:: .:.::::::::::.
NP_060 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB6 EFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMK
::. . . : ::::::::::::.::: ::::: ::: ::::.....: ::::..
NP_060 EFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVIS
130 140 150 160 170
180 190 200 210 220 230
pF1KB6 IEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVA
:. :::::: :::::::::.:: .:. :::.:.:::.:::::::::::::::..::..:
NP_060 IKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMA
180 190 200 210 220 230
240 250 260 270 280 290
pF1KB6 FPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKDPLDAFAR
:: ...::: :.:::::.:.:::::::: : :.::::..: .:::.:.:.::::: .
NP_060 FPELPESELVPFLTRNYLKQGFMEKTGPKQKEPFKKRWFALDCHERRLLYYKNPLDAFEQ
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB6 GEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKA
:.::.:.::.:: . . .: . .:..: :.:::::.:.:...: .:..:.::. ... .
NP_060 GQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGV
300 310 320 330 340 350
360 370
pF1KB6 VDRPMLPQEYAVEAHFKHKP
.. :. :
NP_060 LSSPLTPLNRLTASTESGRSSR
360 370 380
>>XP_016867224 (OMIM: 616813) PREDICTED: arf-GAP with GT (462 aa)
initn: 236 init1: 236 opt: 340 Z-score: 370.6 bits: 77.5 E(85289): 6.7e-14
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:224-328)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
XP_016 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
200 210 220 230 240 250
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
XP_016 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
260 270 280 290 300 310
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
XP_016 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
320 330 340 350 360 370
>>XP_016867222 (OMIM: 616813) PREDICTED: arf-GAP with GT (527 aa)
initn: 236 init1: 236 opt: 340 Z-score: 369.8 bits: 77.6 E(85289): 7.4e-14
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:289-393)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
XP_016 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
260 270 280 290 300 310
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
XP_016 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
320 330 340 350 360 370
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
XP_016 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
380 390 400 410 420 430
>>XP_005250000 (OMIM: 616813) PREDICTED: arf-GAP with GT (565 aa)
initn: 236 init1: 236 opt: 340 Z-score: 369.4 bits: 77.6 E(85289): 7.8e-14
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:327-431)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
XP_005 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
300 310 320 330 340 350
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
XP_005 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
360 370 380 390 400 410
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
XP_005 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
420 430 440 450 460 470
>>XP_016867223 (OMIM: 616813) PREDICTED: arf-GAP with GT (580 aa)
initn: 236 init1: 236 opt: 340 Z-score: 369.2 bits: 77.6 E(85289): 7.9e-14
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:342-446)
10 20 30 40
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
::. : :: ::.::::: .::...:. :::
XP_016 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
320 330 340 350 360 370
50 60 70 80 90 100
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
:::.. ..:.:.:. :: : . :.. :: : . .:. . . : .: :. :. .
XP_016 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
380 390 400 410 420 430
110 120 130 140 150 160
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
:.:::::::.. :. :
XP_016 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
440 450 460 470 480 490
374 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 20:42:25 2016 done: Sat Nov 5 20:42:26 2016
Total Scan time: 7.570 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]