Result of FASTA (omim) for
pF1KB3461
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB3461, 215 aa
1>>>pF1KB3461 215 - 215 aa - 215 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8874+/-0.000413; mu= 16.3259+/- 0.026
mean_var=83.0542+/-16.246, 0's: 0 Z-trim(112.9): 467 B-trim: 466 in 1/52
Lambda= 0.140732
statistics sampled from 21431 (21965) to 21431 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.258), width: 16
Scan time: 5.950
The best scores are: opt bits E(85289)
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 1409 295.7 3.8e-80
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1228 259.0 4.4e-69
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 1228 259.0 4.4e-69
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 1228 259.0 4.4e-69
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 1228 259.0 4.4e-69
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 1228 259.0 4.8e-69
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 1178 248.8 5e-66
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 1178 248.8 5e-66
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 1178 248.8 5e-66
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 1178 248.8 5e-66
NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201) 967 205.9 3.7e-53
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 633 138.1 9.4e-33
NP_001238966 (OMIM: 179514) ras-related protein Ra ( 174) 629 137.3 1.5e-32
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 604 132.2 5.6e-31
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 576 126.6 3.4e-29
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 576 126.7 3.4e-29
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 563 123.9 1.9e-28
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 560 123.3 2.8e-28
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 559 123.1 3.3e-28
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 549 121.1 1.3e-27
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 548 120.9 1.5e-27
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 544 120.1 2.7e-27
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 514 114.0 2e-25
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 507 112.6 5.1e-25
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 502 111.6 1.2e-24
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 498 110.8 1.8e-24
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 494 109.9 3e-24
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 494 109.9 3e-24
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 493 109.7 3.6e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 491 109.3 4.6e-24
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 491 109.3 4.6e-24
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 491 109.3 4.6e-24
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 491 109.3 4.6e-24
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 490 109.1 5.4e-24
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 490 109.1 5.4e-24
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 487 108.5 8.5e-24
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 479 106.9 2.6e-23
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 479 106.9 2.6e-23
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 477 106.5 3.4e-23
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 476 106.3 4.1e-23
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 475 106.0 4.3e-23
NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203) 475 106.1 4.4e-23
NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203) 475 106.1 4.4e-23
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 475 106.1 4.8e-23
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 468 104.7 1.2e-22
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 468 104.7 1.2e-22
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 466 104.3 1.6e-22
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 465 104.1 1.9e-22
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 463 103.6 2.4e-22
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 462 103.4 2.8e-22
>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa)
initn: 1409 init1: 1409 opt: 1409 Z-score: 1559.9 bits: 295.7 E(85289): 3.8e-80
Smith-Waterman score: 1409; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::::::::::::::::::::::::::::::::::
NP_004 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
190 200 210
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1361.3 bits: 259.0 E(85289): 4.4e-69
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
NP_004 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
NP_004 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
::::::::: . .:.::::: : . .:.:::::
NP_004 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1361.3 bits: 259.0 E(85289): 4.4e-69
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
::::::::: . .:.::::: : . .:.:::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1361.3 bits: 259.0 E(85289): 4.4e-69
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
XP_011 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
XP_011 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
::::::::: . .:.::::: : . .:.:::::
XP_011 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1361.3 bits: 259.0 E(85289): 4.4e-69
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:1-216)
10 20 30 40 50
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
::.:: :.::::: .:::::::::::::::::::::::::::::::::.:::::::::::
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB3 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
::::::::::::::::::::::::::::::::::::::::::::: ..::::::::::::
NP_958 QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB3 RQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
:::::::::::.:::::::.::::.:::::.::::::::::::::::.::::::::::::
NP_958 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
130 140 150 160 170 180
180 190 200 210
pF1KB3 KLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
::::::::: . .:.::::: : . .:.:::::
NP_958 KLPKNEPQNATGAPGRNRGVDLQENNPASRSQCCSN
190 200 210
>>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa)
initn: 1221 init1: 1221 opt: 1228 Z-score: 1360.5 bits: 259.0 E(85289): 4.8e-69
Smith-Waterman score: 1228; 87.0% identity (94.9% similar) in 216 aa overlap (1-215:34-249)
10 20
pF1KB3 MASRG-ATRPNGPNTGNKICQFKLVLLGES
::.:: :.::::: .:::::::::::::::
NP_001 SWRSPSPLSASLHSTSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGES
10 20 30 40 50 60
30 40 50 60 70 80
pF1KB3 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY
70 80 90 100 110 120
90 100 110 120 130 140
pF1KB3 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ
::::::::::::::: ..:::::::::::::::::::::::.:::::::.::::.:::::
NP_001 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KB3 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTR
.::::::::::::::::.::::::::::::::::::::: . .:.::::: : . .:
NP_001 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASR
190 200 210 220 230 240
210
pF1KB3 NQCCSN
.:::::
NP_001 SQCCSN
>>NP_002859 (OMIM: 179514) ras-related protein Rab-5B is (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1306.5 bits: 248.8 E(85289): 5e-66
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
NP_002 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
NP_002 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
NP_002 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
NP_002 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1306.5 bits: 248.8 E(85289): 5e-66
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
NP_001 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
NP_001 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
NP_001 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
NP_001 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>XP_005269109 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1306.5 bits: 248.8 E(85289): 5e-66
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
>>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 1178 init1: 1178 opt: 1178 Z-score: 1306.5 bits: 248.8 E(85289): 5e-66
Smith-Waterman score: 1178; 81.9% identity (95.8% similar) in 215 aa overlap (1-215:1-215)
10 20 30 40 50 60
pF1KB3 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
:.::...:::: ..:::::::::::::::::::::::::::::::.::::::::::::
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB3 TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
.:::::::::::::::::::::::::::::::::::::::::::.:.:::::.:::::::
XP_005 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB3 QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
::::.:::::.:::::::::: :...:::.::::::::::::::::.::::..:.:::::
XP_005 QASPSIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
130 140 150 160 170 180
190 200 210
pF1KB3 LPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
:::.:::: :. ..:.::::: : .: ...:::::
XP_005 LPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
190 200 210
215 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 21:04:45 2016 done: Fri Nov 4 21:04:46 2016
Total Scan time: 5.950 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]