Result of FASTA (omim) for pF1KE5408
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5408, 336 aa
  1>>>pF1KE5408     336 - 336 aa - 336 aa
Library: /omim/omim.rfq.tfa
  64092750 residues in 91774 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5826+/-0.000383; mu= 14.7039+/- 0.024
 mean_var=75.0439+/-16.264, 0's: 0 Z-trim(112.4): 89  B-trim: 338 in 1/53
 Lambda= 0.148053
 statistics sampled from 22028 (22132) to 22028 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.241), width:  16
 Scan time:  3.880

The best scores are:                                      opt bits E(91774)
NP_002236 (OMIM: 601745) potassium channel subfami ( 336) 2238 487.6 1.7e-137
XP_011542486 (OMIM: 601745) potassium channel subf ( 268) 1465 322.5 7.1e-88
NP_004814 (OMIM: 603939) potassium channel subfami ( 313)  807 181.9 1.6e-45
NP_203133 (OMIM: 603940) potassium channel subfami ( 307)  696 158.2 2.2e-38
NP_203134 (OMIM: 603940) potassium channel subfami ( 252)  583 134.0 3.5e-31
NP_258416 (OMIM: 603940) potassium channel subfami ( 252)  583 134.0 3.5e-31
NP_005705 (OMIM: 603940) potassium channel subfami ( 257)  583 134.1 3.5e-31
XP_024305396 (OMIM: 605873) potassium channel subf ( 484)  523 121.4 4.3e-27
NP_066984 (OMIM: 605873) potassium channel subfami ( 538)  523 121.4 4.7e-27
NP_612191 (OMIM: 605873) potassium channel subfami ( 543)  523 121.4 4.7e-27
NP_612190 (OMIM: 605873) potassium channel subfami ( 543)  523 121.4 4.7e-27
NP_001128578 (OMIM: 607369) potassium channel subf ( 294)  517 120.0 6.9e-27
NP_115491 (OMIM: 607369) potassium channel subfami ( 309)  517 120.0 7.2e-27
XP_011507826 (OMIM: 603219) potassium channel subf ( 370)  504 117.3 5.7e-26
XP_011507824 (OMIM: 603219) potassium channel subf ( 370)  504 117.3 5.7e-26
XP_011507825 (OMIM: 603219) potassium channel subf ( 370)  504 117.3 5.7e-26
NP_201567 (OMIM: 605720,618381) potassium channel  ( 393)  504 117.3   6e-26
NP_001304019 (OMIM: 605720,618381) potassium chann ( 393)  504 117.3   6e-26
NP_055032 (OMIM: 603219) potassium channel subfami ( 411)  504 117.3 6.2e-26
XP_016856738 (OMIM: 603219) potassium channel subf ( 412)  504 117.3 6.2e-26
NP_001017424 (OMIM: 603219) potassium channel subf ( 422)  504 117.3 6.4e-26
XP_016856737 (OMIM: 603219) potassium channel subf ( 422)  504 117.3 6.4e-26
NP_001017425 (OMIM: 603219) potassium channel subf ( 426)  504 117.3 6.4e-26
NP_001128577 (OMIM: 607369) potassium channel subf ( 322)  488 113.8 5.4e-25
XP_016866835 (OMIM: 607369) potassium channel subf ( 262)  484 112.9 8.3e-25
NP_001128579 (OMIM: 607369) potassium channel subf ( 262)  484 112.9 8.3e-25
XP_005249513 (OMIM: 603493) potassium channel subf ( 496)  468 109.7 1.5e-23
NP_003731 (OMIM: 603493) potassium channel subfami ( 499)  468 109.7 1.5e-23
XP_024307556 (OMIM: 603939) potassium channel subf ( 179)  444 104.3 2.3e-22
NP_113648 (OMIM: 607370) potassium channel subfami ( 332)  417 98.7   2e-20
XP_011535142 (OMIM: 605873) potassium channel subf ( 410)  402 95.5 2.2e-19
NP_001350713 (OMIM: 607369) potassium channel subf ( 197)  376 89.8 5.8e-18
NP_002237 (OMIM: 603220,615344) potassium channel  ( 394)  379 90.6 6.5e-18
NP_001128583 (OMIM: 607370) potassium channel subf ( 271)  372 89.0 1.4e-17
XP_011515404 (OMIM: 605874,612292) potassium chann ( 374)  366 87.8 4.3e-17
NP_001269463 (OMIM: 605874,612292) potassium chann ( 374)  366 87.8 4.3e-17
XP_011515403 (OMIM: 605874,612292) potassium chann ( 401)  366 87.8 4.6e-17
NP_071753 (OMIM: 607368) potassium channel subfami ( 330)  342 82.6 1.4e-15
NP_071337 (OMIM: 607367) potassium channel subfami ( 408)  273 68.0 4.4e-11
XP_016882995 (OMIM: 603939) potassium channel subf ( 185)  255 63.9 3.3e-10
XP_011525829 (OMIM: 603939) potassium channel subf ( 176)  254 63.7 3.7e-10
NP_071338 (OMIM: 607366) potassium channel subfami ( 430)  248 62.6 1.9e-09
XP_005264350 (OMIM: 603220,615344) potassium chann ( 284)  224 57.4 4.6e-08
XP_016869019 (OMIM: 605874,612292) potassium chann ( 264)  220 56.5 7.9e-08
XP_016869020 (OMIM: 605874,612292) potassium chann ( 264)  220 56.5 7.9e-08
XP_011515405 (OMIM: 605874,612292) potassium chann ( 291)  220 56.5 8.5e-08
NP_862823 (OMIM: 613655,613656) potassium channel  ( 384)  202 52.8 1.5e-06
XP_006715298 (OMIM: 603493) potassium channel subf ( 317)  170 45.9 0.00015


>>NP_002236 (OMIM: 601745) potassium channel subfamily K  (336 aa)
 initn: 2238 init1: 2238 opt: 2238  Z-score: 2590.1  bits: 487.6 E(91774): 1.7e-137
Smith-Waterman score: 2238; 100.0% identity (100.0% similar) in 336 aa overlap (1-336:1-336)

               10        20        30        40        50        60
pF1KE5 MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 RRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTTGY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQVVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 GHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQVVA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 IVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 IVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYNQK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE5 FRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQLS
              250       260       270       280       290       300

              310       320       330      
pF1KE5 FSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH
       ::::::::::::::::::::::::::::::::::::
NP_002 FSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH
              310       320       330      

>>XP_011542486 (OMIM: 601745) potassium channel subfamil  (268 aa)
 initn: 1465 init1: 1465 opt: 1465  Z-score: 1699.2  bits: 322.5 E(91774): 7.1e-88
Smith-Waterman score: 1465; 100.0% identity (100.0% similar) in 218 aa overlap (119-336:51-268)

       90       100       110       120       130       140        
pF1KE5 GVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLF
                                     ::::::::::::::::::::::::::::::
XP_011 TQDFKLNGYQLKSRKCSFPFVPWYLEECAIGYGHTVPLSDGGKAFCIIYSVIGIPFTLLF
               30        40        50        60        70        80

      150       160       170       180       190       200        
pF1KE5 LTAVVQRITVHVTRRPVLYFHIRWGFSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTAVVQRITVHVTRRPVLYFHIRWGFSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLED
               90       100       110       120       130       140

      210       220       230       240       250       260        
pF1KE5 DWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFC
              150       160       170       180       190       200

      270       280       290       300       310       320        
pF1KE5 ELHELKKFRKMFYVKKDKDEDQVHIIEHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ELHELKKFRKMFYVKKDKDEDQVHIIEHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSA
              210       220       230       240       250       260

      330      
pF1KE5 CVDGPANH
       ::::::::
XP_011 CVDGPANH
               

>>NP_004814 (OMIM: 603939) potassium channel subfamily K  (313 aa)
 initn: 874 init1: 645 opt: 807  Z-score: 938.7  bits: 181.9 E(91774): 1.6e-45
Smith-Waterman score: 833; 45.5% identity (73.5% similar) in 310 aa overlap (18-309:3-310)

               10        20        30        40        50        60
pF1KE5 MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLK
                        :.:   : :. .:  :::.::.. . .: :.:  :: ::. :.
NP_004                MRRGALLAGALA-AYAAYLVLGALLVARLEGPHEARLRAELETLR
                              10         20        30        40    

               70        80        90       100            110     
pF1KE5 RRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWN-----WDFTSALFFASTVL
        ..:..  :..   :. :. ::: :.  :  ::.::::. :     :::.::::::::..
NP_004 AQLLQRSPCVAAPALDAFVERVLAAGRLGRVVLANASGSANASDPAWDFASALFFASTLI
           50        60        70        80        90       100    

         120       130       140       150       160       170     
pF1KE5 STTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFS
       .:.:::.:.::.:.:::: : ....:.: :.:.::: .::... .:. :. .. .:::..
NP_004 TTVGYGYTTPLTDAGKAFSIAFALLGVPTTMLLLTASAQRLSLLLTHVPLSWLSMRWGWD
          110       120       130       140       150       160    

         180        190       200       210       220       230    
pF1KE5 KQVVAIVHAV-LLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPG
        . .:  : : ::: :.. ::. .::..:. ::. :.::..:::::::::::::::::::
NP_004 PRRAACWHLVALLGVVVTVCFL-VPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPG
          170       180        190       200       210       220   

          240       250       260       270       280              
pF1KE5 EGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKK------DKDE
       :. .: .: :::. .: ::.:::.::..::.:: .. .:. . ... .        . ::
NP_004 EAPGQPYRALYKVLVTVYLFLGLVAMVLVLQTFRHVSDLHGLTELILLPPPCPASFNADE
           230       240       250       260       270       280   

       290            300       310       320       330      
pF1KE5 D-QVHII-----EHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH
       : .: :.      :.::: :: :: :.                           
NP_004 DDRVDILGPQPESHQQLSASSHTDYASIPR                        
           290       300       310                           

>>NP_203133 (OMIM: 603940) potassium channel subfamily K  (307 aa)
 initn: 593 init1: 297 opt: 696  Z-score: 810.6  bits: 158.2 E(91774): 2.2e-38
Smith-Waterman score: 696; 41.3% identity (71.3% similar) in 293 aa overlap (21-308:7-298)

               10        20         30        40        50         
pF1KE5 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL
                           :  .:.::...:: : .:::::...: :    :. :::  
NP_203               MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE
                             10        20        30        40      

      60         70        80        90       100       110        
pF1KE5 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT
          :  ::. ::    ::..:: .: .. .:::.:.:.: . .::. :::.::...:.::
NP_203 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KE5 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV
       :::: .::: ::::::..:...:.: .:  :.:....  . :  ::  .  ..: .:   
NP_203 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR
        110       120       130        140       150       160     

      180       190       200       210       220       230        
pF1KE5 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN
       .:...:: ::....: : ..:: :.  :. : ..: . :::: ::::::: : .::.: .
NP_203 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS
         170       180       190       200       210       220     

      240         250       260       270       280        290     
pF1KE5 QK--FRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKD-KDEDQVHIIE
        .  . .: ....  ::::::.:::...::: :: ... . :.:  .     :::  :. 
NP_203 LHPVIYHLGQLALLGYLLLGLLAMLLAVETFSELPQVRAMGKFFRPSGPVTAEDQGGILG
         230       240       250       260       270       280     

         300       310       320       330      
pF1KE5 HDQLSFSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH
       .:.:..:..   :                            
NP_203 QDELALSTLPPAAPASGQAPAC                   
         290       300                          

>>NP_203134 (OMIM: 603940) potassium channel subfamily K  (252 aa)
 initn: 498 init1: 292 opt: 583  Z-score: 681.5  bits: 134.0 E(91774): 3.5e-31
Smith-Waterman score: 583; 44.0% identity (72.9% similar) in 218 aa overlap (21-236:7-223)

               10        20         30        40        50         
pF1KE5 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL
                           :  .:.::...:: : .:::::...: :    :. :::  
NP_203               MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE
                             10        20        30        40      

      60         70        80        90       100       110        
pF1KE5 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT
          :  ::. ::    ::..:: .: .. .:::.:.:.: . .::. :::.::...:.::
NP_203 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KE5 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV
       :::: .::: ::::::..:...:.: .:  :.:....  . :  ::  .  ..: .:   
NP_203 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR
        110       120       130        140       150       160     

      180       190       200       210       220       230        
pF1KE5 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN
       .:...:: ::....: : ..:: :.  :. : ..: . :::: ::::::: : .::.:  
NP_203 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS
         170       180       190       200       210       220     

      240       250       260       270       280       290        
pF1KE5 QKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQ
                                                                   
NP_203 LHPVIYHLGQLALLGGGTSLQGTAWEG                                 
         230       240       250                                   

>>NP_258416 (OMIM: 603940) potassium channel subfamily K  (252 aa)
 initn: 498 init1: 292 opt: 583  Z-score: 681.5  bits: 134.0 E(91774): 3.5e-31
Smith-Waterman score: 583; 44.0% identity (72.9% similar) in 218 aa overlap (21-236:7-223)

               10        20         30        40        50         
pF1KE5 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL
                           :  .:.::...:: : .:::::...: :    :. :::  
NP_258               MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE
                             10        20        30        40      

      60         70        80        90       100       110        
pF1KE5 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT
          :  ::. ::    ::..:: .: .. .:::.:.:.: . .::. :::.::...:.::
NP_258 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KE5 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV
       :::: .::: ::::::..:...:.: .:  :.:....  . :  ::  .  ..: .:   
NP_258 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR
        110       120       130        140       150       160     

      180       190       200       210       220       230        
pF1KE5 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN
       .:...:: ::....: : ..:: :.  :. : ..: . :::: ::::::: : .::.:  
NP_258 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS
         170       180       190       200       210       220     

      240       250       260       270       280       290        
pF1KE5 QKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQ
                                                                   
NP_258 LHPVIYHLGQLALLGGGTSLQGTAWEG                                 
         230       240       250                                   

>>NP_005705 (OMIM: 603940) potassium channel subfamily K  (257 aa)
 initn: 498 init1: 292 opt: 583  Z-score: 681.3  bits: 134.1 E(91774): 3.5e-31
Smith-Waterman score: 583; 44.0% identity (72.9% similar) in 218 aa overlap (21-236:7-223)

               10        20         30        40        50         
pF1KE5 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL
                           :  .:.::...:: : .:::::...: :    :. :::  
NP_005               MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE
                             10        20        30        40      

      60         70        80        90       100       110        
pF1KE5 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT
          :  ::. ::    ::..:: .: .. .:::.:.:.: . .::. :::.::...:.::
NP_005 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT
         50        60        70        80        90       100      

      120       130       140       150       160       170        
pF1KE5 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV
       :::: .::: ::::::..:...:.: .:  :.:....  . :  ::  .  ..: .:   
NP_005 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR
        110       120       130        140       150       160     

      180       190       200       210       220       230        
pF1KE5 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN
       .:...:: ::....: : ..:: :.  :. : ..: . :::: ::::::: : .::.:  
NP_005 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS
         170       180       190       200       210       220     

      240       250       260       270       280       290        
pF1KE5 QKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQ
                                                                   
NP_005 LHPVIYHLGQLALLGKSSHLTACGGRGKRSLD                            
         230       240       250                                   

>>XP_024305396 (OMIM: 605873) potassium channel subfamil  (484 aa)
 initn: 488 init1: 193 opt: 523  Z-score: 608.0  bits: 121.4 E(91774): 4.3e-27
Smith-Waterman score: 523; 35.1% identity (71.4% similar) in 245 aa overlap (25-264:22-261)

               10        20        30        40        50        60
pF1KE5 MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKLK
                               :.:.  ..::: :..:: ..: :.:.  .. .   :
XP_024    MEGTSQGGLQTVMKWKTVVAIFVVV--VVYLVTGGLVFRALEQPFESSQKNTIALEK
                  10        20          30        40        50     

               70        80        90       100        110         
pF1KE5 RRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWN-WDFTSALFFASTVLSTTG
        .::..: :.: :.:: .. ..:.:.: ::: ..:.:.: . ::. ::.:::.::..: :
XP_024 AEFLRDHVCVSPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGTVITTIG
          60        70        80        90       100       110     

     120       130       140       150       160       170         
pF1KE5 YGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHI--RWGFSKQ
       ::. .: ..::: :::.:...:::.  ..:... ... .   .  .   ..  .   :. 
XP_024 YGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRKKQVSQT
         120       130       140       150       160       170     

       180       190         200       210       220       230     
pF1KE5 VVAIVHAVLLGFVTVSCFFF--IPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGE
        . .. ..:  :. ..:. :  :::..:. .:  :. :::.::  ..:.:.:.::.: : 
XP_024 KIRVISTIL--FILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFGDFVAGG
         180         190       200        210       220       230  

         240       250       260       270       280       290     
pF1KE5 GYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIE
       . . ..:: ::  .  ..:.::  . .::                               
XP_024 NAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHAAEWKAN
            240       250       260       270       280       290  

>>NP_066984 (OMIM: 605873) potassium channel subfamily K  (538 aa)
 initn: 488 init1: 193 opt: 523  Z-score: 607.3  bits: 121.4 E(91774): 4.7e-27
Smith-Waterman score: 523; 35.1% identity (71.4% similar) in 245 aa overlap (25-264:76-315)

                     10        20        30        40        50    
pF1KE5       MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQ
                                     :.:.  ..::: :..:: ..: :.:.  ..
NP_066 SSRATVVARMEGTSQGGLQTVMKWKTVVAIFVVV--VVYLVTGGLVFRALEQPFESSQKN
          50        60        70          80        90       100   

           60        70        80        90       100        110   
pF1KE5 ELRKLKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWN-WDFTSALFFAST
        .   : .::..: :.: :.:: .. ..:.:.: ::: ..:.:.: . ::. ::.:::.:
NP_066 TIALEKAEFLRDHVCVSPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGT
           110       120       130       140       150       160   

           120       130       140       150       160       170   
pF1KE5 VLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHI--R
       :..: :::. .: ..::: :::.:...:::.  ..:... ... .   .  .   ..  .
NP_066 VITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRK
           170       180       190       200       210       220   

             180       190         200       210       220         
pF1KE5 WGFSKQVVAIVHAVLLGFVTVSCFFF--IPAAVFSVLEDDWNFLESFYFCFISLSTIGLG
          :.  . .. ..:  :. ..:. :  :::..:. .:  :. :::.::  ..:.:.:.:
NP_066 KQVSQTKIRVISTIL--FILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFG
           230         240       250       260        270       280

     230       240       250       260       270       280         
pF1KE5 DYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDED
       :.: : . . ..:: ::  .  ..:.::  . .::                         
NP_066 DFVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHA
              290       300       310       320       330       340

     290       300       310       320       330                   
pF1KE5 QVHIIEHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH             
                                                                   
NP_066 AEWKANVTAEFRETRRRLSVEIHDKLQRAATIRSMERRRLGLDQRAHSLDMLSPEKRSVF
              350       360       370       380       390       400

>>NP_612191 (OMIM: 605873) potassium channel subfamily K  (543 aa)
 initn: 488 init1: 193 opt: 523  Z-score: 607.3  bits: 121.4 E(91774): 4.7e-27
Smith-Waterman score: 523; 35.1% identity (71.4% similar) in 245 aa overlap (25-264:81-320)

                     10        20        30        40        50    
pF1KE5       MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQ
                                     :.:.  ..::: :..:: ..: :.:.  ..
NP_612 SSRATVVARMEGTSQGGLQTVMKWKTVVAIFVVV--VVYLVTGGLVFRALEQPFESSQKN
               60        70        80          90       100        

           60        70        80        90       100        110   
pF1KE5 ELRKLKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWN-WDFTSALFFAST
        .   : .::..: :.: :.:: .. ..:.:.: ::: ..:.:.: . ::. ::.:::.:
NP_612 TIALEKAEFLRDHVCVSPQELETLIQHALDADNAGVSPIGNSSNNSSHWDLGSAFFFAGT
      110       120       130       140       150       160        

           120       130       140       150       160       170   
pF1KE5 VLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHI--R
       :..: :::. .: ..::: :::.:...:::.  ..:... ... .   .  .   ..  .
NP_612 VITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEKVFRK
      170       180       190       200       210       220        

             180       190         200       210       220         
pF1KE5 WGFSKQVVAIVHAVLLGFVTVSCFFF--IPAAVFSVLEDDWNFLESFYFCFISLSTIGLG
          :.  . .. ..:  :. ..:. :  :::..:. .:  :. :::.::  ..:.:.:.:
NP_612 KQVSQTKIRVISTIL--FILAGCIVFVTIPAVIFKYIEG-WTALESIYFVVVTLTTVGFG
      230       240         250       260        270       280     

     230       240       250       260       270       280         
pF1KE5 DYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDED
       :.: : . . ..:: ::  .  ..:.::  . .::                         
NP_612 DFVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLSMIGDWLRVLSKKTKEEVGEIKAHA
         290       300       310       320       330       340     

     290       300       310       320       330                   
pF1KE5 QVHIIEHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSACVDGPANH             
                                                                   
NP_612 AEWKANVTAEFRETRRRLSVEIHDKLQRAATIRSMERRRLGLDQRAHSLDMLSPEKRSVF
         350       360       370       380       390       400     




336 residues in 1 query   sequences
64092750 residues in 91774 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Jul 16 15:42:05 2019 done: Tue Jul 16 15:42:06 2019
 Total Scan time:  3.880 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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