Result of FASTA (ccds) for pF1KB0401
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0401, 171 aa
  1>>>pF1KB0401 171 - 171 aa - 171 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5745+/-0.000942; mu= 11.4537+/- 0.057
 mean_var=85.0667+/-17.146, 0's: 0 Z-trim(106.4): 80  B-trim: 4 in 1/48
 Lambda= 0.139058
 statistics sampled from 8860 (8945) to 8860 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.275), width:  16
 Scan time:  1.360

The best scores are:                                      opt bits E(32554)
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18       ( 171) 1136 237.4 3.3e-63
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18       ( 177) 1136 237.4 3.4e-63
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18      ( 172) 1108 231.8 1.6e-61
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20         ( 172) 1072 224.5 2.4e-59
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12          ( 166)  634 136.7 6.7e-33
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4           ( 173)  615 132.9 9.7e-32
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16        ( 169)  610 131.9 1.9e-31
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7           ( 175)  559 121.6 2.4e-28
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7         ( 226)  492 108.3 3.2e-24
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14           ( 149)  401 89.9 7.2e-19
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2            ( 149)  401 89.9 7.2e-19
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19          ( 149)  401 89.9 7.2e-19
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10          ( 149)  378 85.3 1.8e-17
CCDS13277.1 MYL9 gene_id:10398|Hs108|chr20         ( 118)  360 81.6 1.8e-16
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX          ( 172)  291 67.9 3.6e-12
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18         ( 172)  282 66.1 1.2e-11
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15       ( 196)  276 64.9 3.2e-11


>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18            (171 aa)
 initn: 1136 init1: 1136 opt: 1136  Z-score: 1248.3  bits: 237.4 E(32554): 3.3e-63
Smith-Waterman score: 1136; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171)

               10        20        30        40        50        60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 GKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 GKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQED
               70        80        90       100       110       120

              130       140       150       160       170 
pF1KB0 YLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
              130       140       150       160       170 

>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18            (177 aa)
 initn: 1136 init1: 1136 opt: 1136  Z-score: 1248.1  bits: 237.4 E(32554): 3.4e-63
Smith-Waterman score: 1136; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:7-177)

                     10        20        30        40        50    
pF1KB0       MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
             ::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MDLTTTMSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLH
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB0 DMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 DMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEAT
               70        80        90       100       110       120

          120       130       140       150       160       170 
pF1KB0 GTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 GTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
              130       140       150       160       170       

>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18           (172 aa)
 initn: 1077 init1: 1077 opt: 1108  Z-score: 1217.9  bits: 231.8 E(32554): 1.6e-61
Smith-Waterman score: 1108; 97.7% identity (98.8% similar) in 172 aa overlap (1-171:1-172)

               10         20        30        40        50         
pF1KB0 MSSKRTKTKT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
       ::::..:::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB0 LGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
       ::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LGKNPTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
               70        80        90       100       110       120

     120       130       140       150       160       170 
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
              130       140       150       160       170  

>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20              (172 aa)
 initn: 1042 init1: 1042 opt: 1072  Z-score: 1178.8  bits: 224.5 E(32554): 2.4e-59
Smith-Waterman score: 1072; 93.0% identity (98.8% similar) in 172 aa overlap (1-171:1-172)

               10         20        30        40        50         
pF1KB0 MSSKRTKTKT-KKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
       :::::.:.:: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB0 LGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
       ::::::::::..::.:::::::::::::::::::::::::::::::::::::::.: :.:
CCDS13 LGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHE
               70        80        90       100       110       120

     120       130       140       150       160       170 
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       :.:::::::::::::::::::.::::::::::::::.:::::::::::::::
CCDS13 DHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
              130       140       150       160       170  

>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12               (166 aa)
 initn: 627 init1: 388 opt: 634  Z-score: 704.2  bits: 136.7 E(32554): 6.7e-33
Smith-Waterman score: 634; 57.7% identity (84.7% similar) in 163 aa overlap (9-170:5-166)

               10        20        30        40        50        60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
               :.:::   :.::::.::.:.:::::::::...::::::::::.::.: .:.:
CCDS31     MAPKKAKKRAGGANSNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAAL
                   10        20        30        40        50      

                70        80        90       100       110         
pF1KB0 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
       :. :  .: .: :..:::::::::.:::::::::.:.:::..: :::  :: :. :... 
CCDS31 GRVNVKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKA
         60        70        80        90       100       110      

     120       130       140       150       160       170 
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       ::.::.:::...::. ::::...   : :  ::..: ....:. :: ..:: 
CCDS31 DYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHG-EEKD 
        120       130       140       150       160        

>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4                (173 aa)
 initn: 586 init1: 341 opt: 615  Z-score: 683.3  bits: 132.9 E(32554): 9.7e-32
Smith-Waterman score: 615; 53.8% identity (80.3% similar) in 173 aa overlap (1-170:1-173)

               10          20        30        40        50        
pF1KB0 MSSKRTKTKTKK--RPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA
       :.:..:: :     : :::.::::. :.:.:::::::::...:::::::::::::.:  :
CCDS43 MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEFKEAFTLMDQNRDGFIDKEDLKDTYA
               10        20        30        40        50        60

       60         70        80        90       100       110       
pF1KB0 SLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTI
       :::: :  :. ::::..:: :::::::::..:::::.::: :..: :::  .: .. : :
CCDS43 SLGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKI
               70        80        90       100       110       120

       120       130       140       150       160       170 
pF1KB0 QEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       ...:...:: ...:..: ::::.... : ::  ::..:  .. .. :: . .. 
CCDS43 NKEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE 
              130       140       150       160       170    

>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16             (169 aa)
 initn: 584 init1: 369 opt: 610  Z-score: 678.0  bits: 131.9 E(32554): 1.9e-31
Smith-Waterman score: 610; 55.8% identity (80.8% similar) in 172 aa overlap (1-170:1-169)

               10        20        30        40        50        60
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASL
       :. ::.: .:    . ..:.::.::::.:::::::::..:::::::.::::::.: .:..
CCDS10 MAPKRAKRRTV---EGGSSSVFSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTFAAM
               10           20        30        40        50       

                70        80        90       100       110         
pF1KB0 GK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQE
       :. :  .: :::::.:: ::::::.:::::::::.:.:::::: .::  .: :. :::..
CCDS10 GRLNVKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKK
        60        70        80        90       100       110       

     120       130       140       150       160        170 
pF1KB0 DYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHG-AKDKDD
        .:.:::::. :::..::. ...   : :  :: .: ..  .. :: :::.. 
CCDS10 KFLEELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE 
       120       130       140       150       160          

>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7                (175 aa)
 initn: 570 init1: 338 opt: 559  Z-score: 622.5  bits: 121.6 E(32554): 2.4e-28
Smith-Waterman score: 559; 48.6% identity (78.3% similar) in 175 aa overlap (1-170:1-175)

               10            20        30        40        50      
pF1KB0 MSSKRTKTKTK----KRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDM
       :.:... :. :    :. ::..::::.::.:.:::::::::. :::::::.: : ::.. 
CCDS54 MASRKAGTRGKVAATKQAQRGSSNVFSMFEQAQIQEFKEAFSCIDQNRDGIICKADLRET
               10        20        30        40        50        60

         60         70        80        90       100       110     
pF1KB0 LASLGK-NPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATG
        ..::: .  .: ::::..:. ::::::.:::.:::::::::::..: .::  ::  . :
CCDS54 YSQLGKVSVPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKG
               70        80        90       100       110       120

         120       130       140       150       160       170 
pF1KB0 TIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       ....: ...:: :..:.:.  ::....  .:.:  ::..:  .  :. :: . .. 
CCDS54 VVNKDEFKQLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE 
              130       140       150       160       170      

>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7              (226 aa)
 initn: 485 init1: 359 opt: 492  Z-score: 548.3  bits: 108.3 E(32554): 3.2e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (9-170:30-226)

                                    10         20        30        
pF1KB0                      MSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
                                    ...:: .  :.::::.::::::::::::   
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
               10        20        30        40        50        60

                                         40        50        60    
pF1KB0 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
                                      ::...:::::::::::::.: .:.::. :
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
               70        80        90       100       110       120

            70        80        90       100       110       120   
pF1KB0 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
         .: :.::..:::::::::.:::::::::.:::::..: .::  :: :. : .. : ..
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
              130       140       150       160       170       180

           130       140       150       160       170 
pF1KB0 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       : : :..:::..::: ...   : :  ::..: ..  .. :: ..:: 
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD 
              190       200       210       220        

>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14                (149 aa)
 initn: 421 init1: 246 opt: 401  Z-score: 452.2  bits: 89.9 E(32554): 7.2e-19
Smith-Waterman score: 401; 45.2% identity (73.3% similar) in 146 aa overlap (24-162:1-146)

               10        20           30        40        50       
pF1KB0 MSSKRTKTKTKKRPQRATSNVFAMFDQ---SQIQEFKEAFNMIDQNRDGFIDKEDLHDML
                              : ::    :: ::::::...:.. :: :  ..:  ..
CCDS98                        MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM
                                      10        20        30       

        60        70            80        90       100       110   
pF1KB0 ASLGKNPTDEYLDAMMNEAP----GPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEA
        :::.:::.  :. :.::.     : :.:  ::::...:.. :: :. ::.::  ::...
CCDS98 RSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG
        40        50        60        70        80        90       

           120       130       140       150       160       170 
pF1KB0 TGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
       .: :.   ::...:..:...:::::::. ::: ::  :. :: ::....         
CCDS98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK      
       100       110       120       130       140               




171 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:49:40 2016 done: Sat Nov  5 11:49:41 2016
 Total Scan time:  1.360 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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