Result of FASTA (omim) for pF1KB4614
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB4614, 596 aa
  1>>>pF1KB4614 596 - 596 aa - 596 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.7293+/-0.000461; mu= -10.8580+/- 0.029
 mean_var=353.5402+/-74.958, 0's: 0 Z-trim(119.4): 359  B-trim: 777 in 1/59
 Lambda= 0.068211
 statistics sampled from 32952 (33315) to 32952 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.391), width:  16
 Scan time: 11.190

The best scores are:                                      opt bits E(85289)
NP_006448 (OMIM: 605904) PDZ and LIM domain protei ( 596) 4052 413.1 1.4e-114
XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM ( 602) 4025 410.4 8.7e-114
NP_001243357 (OMIM: 605904) PDZ and LIM domain pro ( 474) 3251 334.2 6.1e-91
NP_001011513 (OMIM: 605904) PDZ and LIM domain pro ( 487) 2720 281.9 3.3e-75
XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM ( 493) 2693 279.3 2.1e-74
XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM ( 600) 2659 276.0 2.5e-73
NP_001243356 (OMIM: 605904) PDZ and LIM domain pro ( 483) 2623 272.4 2.5e-72
XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM ( 607) 2573 267.5   9e-71
XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM ( 498) 2519 262.2 3.1e-69
NP_001243355 (OMIM: 605904) PDZ and LIM domain pro ( 625) 2058 216.9 1.7e-55
XP_006714133 (OMIM: 605904) PREDICTED: PDZ and LIM ( 605) 2053 216.4 2.3e-55
XP_005262753 (OMIM: 605904) PREDICTED: PDZ and LIM ( 619) 2053 216.4 2.3e-55
XP_006714131 (OMIM: 605904) PREDICTED: PDZ and LIM ( 630) 2053 216.4 2.4e-55
XP_005262752 (OMIM: 605904) PREDICTED: PDZ and LIM ( 728) 2053 216.4 2.6e-55
XP_005262750 (OMIM: 605904) PREDICTED: PDZ and LIM ( 734) 2053 216.4 2.7e-55
XP_006714129 (OMIM: 605904) PREDICTED: PDZ and LIM ( 739) 2053 216.4 2.7e-55
NP_001243354 (OMIM: 605904) PDZ and LIM domain pro ( 271) 1934 204.4   4e-52
XP_011537487 (OMIM: 605906,609452) PREDICTED: LIM  ( 811) 1176 130.1 2.8e-29
XP_011537486 (OMIM: 605906,609452) PREDICTED: LIM  ( 811) 1176 130.1 2.8e-29
XP_011537491 (OMIM: 605906,609452) PREDICTED: LIM  ( 696) 1145 127.0   2e-28
XP_011537493 (OMIM: 605906,609452) PREDICTED: LIM  ( 633) 1136 126.1 3.5e-28
XP_011537495 (OMIM: 605906,609452) PREDICTED: LIM  ( 463) 1132 125.6 3.5e-28
XP_016871096 (OMIM: 605906,609452) PREDICTED: LIM  ( 463) 1132 125.6 3.5e-28
XP_016871095 (OMIM: 605906,609452) PREDICTED: LIM  ( 743) 1136 126.2 3.9e-28
XP_011537490 (OMIM: 605906,609452) PREDICTED: LIM  ( 743) 1136 126.2 3.9e-28
XP_011537492 (OMIM: 605906,609452) PREDICTED: LIM  ( 680) 1126 125.2 7.2e-28
XP_005269521 (OMIM: 605906,609452) PREDICTED: LIM  ( 727) 1126 125.2 7.6e-28
NP_009009 (OMIM: 605906,609452) LIM domain-binding ( 727) 1126 125.2 7.6e-28
XP_011537488 (OMIM: 605906,609452) PREDICTED: LIM  ( 795) 1126 125.2 8.2e-28
XP_011537496 (OMIM: 605906,609452) PREDICTED: LIM  ( 400) 1109 123.3 1.5e-27
NP_001073583 (OMIM: 605906,609452) LIM domain-bind ( 617) 1109 123.5 2.1e-27
XP_005269523 (OMIM: 605906,609452) PREDICTED: LIM  ( 664) 1109 123.5 2.3e-27
NP_001165081 (OMIM: 605906,609452) LIM domain-bind ( 732) 1109 123.5 2.5e-27
XP_011537489 (OMIM: 605906,609452) PREDICTED: LIM  ( 748) 1109 123.5 2.5e-27
XP_011533001 (OMIM: 605903) PREDICTED: PDZ and LIM ( 309)  890 101.7 3.8e-21
XP_011533000 (OMIM: 605903) PREDICTED: PDZ and LIM ( 364)  890 101.8 4.3e-21
NP_976227 (OMIM: 605903) PDZ and LIM domain protei ( 423)  890 101.8 4.9e-21
NP_005442 (OMIM: 605903) PDZ and LIM domain protei ( 457)  890 101.8 5.2e-21
NP_001011516 (OMIM: 605904) PDZ and LIM domain pro ( 214)  644 77.4 5.5e-14
NP_001011515 (OMIM: 605904) PDZ and LIM domain pro ( 234)  644 77.4 5.9e-14
NP_057011 (OMIM: 602353) transforming growth facto ( 444)  609 74.2 1.1e-12
NP_001158191 (OMIM: 602353) transforming growth fa ( 444)  609 74.2 1.1e-12
NP_001035919 (OMIM: 602353) transforming growth fa ( 461)  609 74.2 1.1e-12
XP_016871097 (OMIM: 605906,609452) PREDICTED: LIM  ( 330)  560 69.3 2.4e-11
NP_001073584 (OMIM: 605906,609452) LIM domain-bind ( 330)  560 69.3 2.4e-11
XP_005269525 (OMIM: 605906,609452) PREDICTED: LIM  ( 330)  560 69.3 2.4e-11
XP_006718813 (OMIM: 605390) PREDICTED: leupaxin is ( 290)  557 68.9 2.6e-11
XP_011543693 (OMIM: 605390) PREDICTED: leupaxin is ( 366)  557 69.0 3.2e-11
XP_011543690 (OMIM: 605390) PREDICTED: leupaxin is ( 366)  557 69.0 3.2e-11
NP_001294880 (OMIM: 605390) leupaxin isoform 3 [Ho ( 366)  557 69.0 3.2e-11


>>NP_006448 (OMIM: 605904) PDZ and LIM domain protein 5   (596 aa)
 initn: 4052 init1: 4052 opt: 4052  Z-score: 2178.3  bits: 413.1 E(85289): 1.4e-114
Smith-Waterman score: 4052; 99.7% identity (100.0% similar) in 596 aa overlap (1-596:1-596)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB4 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB4 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB4 PSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
       ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_006 PSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB4 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB4 RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
              490       500       510       520       530       540

              550       560       570       580       590      
pF1KB4 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
              550       560       570       580       590      

>>XP_016863146 (OMIM: 605904) PREDICTED: PDZ and LIM dom  (602 aa)
 initn: 4033 init1: 2503 opt: 4025  Z-score: 2163.8  bits: 410.4 E(85289): 8.7e-114
Smith-Waterman score: 4025; 98.5% identity (99.0% similar) in 602 aa overlap (1-596:1-602)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
              130       140       150       160       170       180

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::   
XP_016 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
          :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGS
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
       ::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_016 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
              370       380       390       400       410       420

          420       430       440       450       460       470    
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
              430       440       450       460       470       480

          480       490       500       510       520       530    
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_016 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
              490       500       510       520       530       540

          540       550       560       570       580       590    
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
              550       560       570       580       590       600

         
pF1KB4 NF
       ::
XP_016 NF
         

>>NP_001243357 (OMIM: 605904) PDZ and LIM domain protein  (474 aa)
 initn: 3251 init1: 3251 opt: 3251  Z-score: 1753.7  bits: 334.2 E(85289): 6.1e-91
Smith-Waterman score: 3251; 99.6% identity (100.0% similar) in 474 aa overlap (123-596:1-474)

            100       110       120       130       140       150  
pF1KB4 VPVQKGEPKEVVKPVPITSPAVSKVTSTNNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTP
                                     ::::::::::::::::::::::::::::::
NP_001                               MAYNKAPRPFGSVSSPKVTSIPSPSSAFTP
                                             10        20        30

            160       170       180       190       200       210  
pF1KB4 AHATTSSHASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHATTSSHASPSPVAAVTPPLFAASGLHANANLSADQSPSALSAGKTAVNVPRQPTVTSV
               40        50        60        70        80        90

            220       230       240       250       260       270  
pF1KB4 CSETSQELAEGQRRGSQGDSKQQNGPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSETSQELAEGQRRGSQGDSKQQNGPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWR
              100       110       120       130       140       150

            280       290       300       310       320       330  
pF1KB4 PRTGTTQSRSFRILAQITGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRTGTTQSRSFRILAQITGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDS
              160       170       180       190       200       210

            340       350       360       370       380       390  
pF1KB4 PTSGRPGVTSLTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSA
       ::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
NP_001 PTSGRPGVTSLTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSA
              220       230       240       250       260       270

            400       410       420       430       440       450  
pF1KB4 LGQTQPSDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGQTQPSDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNT
              280       290       300       310       320       330

            460       470       480       490       500       510  
pF1KB4 MAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPI
       :::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
NP_001 MAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPI
              340       350       360       370       380       390

            520       530       540       550       560       570  
pF1KB4 RNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCES
              400       410       420       430       440       450

            580       590      
pF1KB4 LEGQTFFSKKDKPLCKKHAHSVNF
       ::::::::::::::::::::::::
NP_001 LEGQTFFSKKDKPLCKKHAHSVNF
              460       470    

>>NP_001011513 (OMIM: 605904) PDZ and LIM domain protein  (487 aa)
 initn: 2714 init1: 2714 opt: 2720  Z-score: 1471.1  bits: 281.9 E(85289): 3.3e-75
Smith-Waterman score: 3127; 81.4% identity (81.7% similar) in 596 aa overlap (1-596:1-487)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::                       
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
                                 ::::::::::::::::::::::::::::::::::
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGPPR
                                 100       110       120       130 

              250       260       270       280       290       300
pF1KB4 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEA
             140       150       160       170       180       190 

              310       320       330       340       350       360
pF1KB4 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGSTGVIKS
             200       210       220       230       240       250 

              370       380       390       400       410       420
pF1KB4 PSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
       ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_001 PSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAGKRTPMC
             260       270       280       290       300       310 

              430       440       450       460       470       480
pF1KB4 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECG
             320       330       340       350       360       370 

              490       500       510       520       530       540
pF1KB4 RCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICHG
             380       390       400       410       420       430 

              550       560       570       580       590      
pF1KB4 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
             440       450       460       470       480       

>>XP_005262755 (OMIM: 605904) PREDICTED: PDZ and LIM dom  (493 aa)
 initn: 3133 init1: 2503 opt: 2693  Z-score: 1456.7  bits: 279.3 E(85289): 2.1e-74
Smith-Waterman score: 3100; 80.4% identity (80.9% similar) in 602 aa overlap (1-596:1-493)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::                       
XP_005 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
                                                                   
XP_005 ------------------------------------------------------------
                                                                   

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
                                 :::::::::::::::::::::::::::::::   
XP_005 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
                                 100       110       120       130 

          240       250       260       270       280       290    
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
          :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
             140       150       160       170       180       190 

          300       310       320       330       340       350    
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_005 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAFKPVGS
             200       210       220       230       240       250 

          360       370       380       390       400       410    
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
       ::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_005 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
             260       270       280       290       300       310 

          420       430       440       450       460       470    
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
             320       330       340       350       360       370 

          480       490       500       510       520       530    
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
XP_005 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
             380       390       400       410       420       430 

          540       550       560       570       580       590    
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
             440       450       460       470       480       490 

         
pF1KB4 NF
       ::
XP_005 NF
         

>>XP_011529845 (OMIM: 605904) PREDICTED: PDZ and LIM dom  (600 aa)
 initn: 2683 init1: 2053 opt: 2659  Z-score: 1437.4  bits: 276.0 E(85289): 2.5e-73
Smith-Waterman score: 2661; 69.4% identity (80.5% similar) in 611 aa overlap (1-596:1-600)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::    .:.: .:   :  ....  
XP_011 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK--KTQVTKKIPPKRPPRKHIVER
               70        80        90         100       110        

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
        .  :.    :  : .: :   .   .  . :  .::.:. :   .: .:       . .
XP_011 YTEFYHV---PTHSDASKK--RLIEDTEDWRPRTGTTQSR-SFRILAQITGTEHLKES-E
      120          130         140       150        160       170  

              190        200       210       220       230         
pF1KB4 ANANLSADQSPSAL-SAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGPP
       :. : .  .  ::: .  :.. . :  : : .. :...  :..     :. .:.  :   
XP_011 AD-NTKKAKFDSALEDLPKSGPHPPATPQVLTIGSQVAT-LSKVATTYSSLSSSTGNVED
              180       190       200        210       220         

     240       250            260          270       280           
pF1KB4 RKHIVERYTEF-----YHVPTHSDAS---KKRLIEDTEDWRPRTGTTQSRSFRI--LAQI
         .  . .. :     : . . :.:.   .  .   :. . :.   .   .. :  ... 
XP_011 SFEGFRNFSTFSSPARYSAAVLSSAAATVSAVIATKTRLYTPERYHSLLDALCISPVSKP
     230       240       250       260       270       280         

     290       300           310       320       330       340     
pF1KB4 TGTEHLKESEAD----NTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTT
        .  .:. :. .    ..::..:::::::::::::::::::::::::::::::::::::.
XP_011 LAFSYLQSSRKSTGSIHVKKTSNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTA
     290       300       310       320       330       340         

         350       360       370       380       390       400     
pF1KB4 AAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLV
       :::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::
XP_011 AAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLV
     350       360       370       380       390       400         

         410       420       430       440       450       460     
pF1KB4 QRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGAL
     410       420       430       440       450       460         

         470       480       490       500       510       520     
pF1KB4 YCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPY
       ::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
XP_011 YCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPY
     470       480       490       500       510       520         

         530       540       550       560       570       580     
pF1KB4 CETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKP
     530       540       550       560       570       580         

         590      
pF1KB4 LCKKHAHSVNF
       :::::::::::
XP_011 LCKKHAHSVNF
     590       600

>>NP_001243356 (OMIM: 605904) PDZ and LIM domain protein  (483 aa)
 initn: 3063 init1: 2433 opt: 2623  Z-score: 1419.6  bits: 272.4 E(85289): 2.5e-72
Smith-Waterman score: 3030; 80.2% identity (80.6% similar) in 592 aa overlap (1-586:1-483)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::                       
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
                                 :::::::::::::::::::::::::::::::   
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
                                 100       110       120       130 

          240       250       260       270       280       290    
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
          :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
             140       150       160       170       180       190 

          300       310       320       330       340       350    
pF1KB4 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAFKPVGS
             200       210       220       230       240       250 

          360       370       380       390       400       410    
pF1KB4 TGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
       ::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::
NP_001 TGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAEHIPAG
             260       270       280       290       300       310 

          420       430       440       450       460       470    
pF1KB4 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF
             320       330       340       350       360       370 

          480       490       500       510       520       530    
pF1KB4 FAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_001 FAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALF
             380       390       400       410       420       430 

          540       550       560       570       580       590    
pF1KB4 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
NP_001 GTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPL        
             440       450       460       470       480           

         
pF1KB4 NF

>>XP_006714132 (OMIM: 605904) PREDICTED: PDZ and LIM dom  (607 aa)
 initn: 2503 init1: 2503 opt: 2573  Z-score: 1391.6  bits: 267.5 E(85289): 9e-71
Smith-Waterman score: 4015; 97.7% identity (98.2% similar) in 607 aa overlap (1-596:1-607)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
              130       140       150       160       170       180

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::   
XP_006 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNGNPG
              190       200       210       220       230       240

               240       250       260       270       280         
pF1KB4 --------PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
               ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TVKIPPKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
              250       260       270       280       290       300

     290       300       310       320       330       340         
pF1KB4 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_006 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAF
              310       320       330       340       350       360

     350       360       370       380       390       400         
pF1KB4 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_006 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAE
              370       380       390       400       410       420

     410       420       430       440       450       460         
pF1KB4 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
              430       440       450       460       470       480

     470       480       490       500       510       520         
pF1KB4 CYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
       ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_006 CYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
              490       500       510       520       530       540

     530       540       550       560       570       580         
pF1KB4 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
              550       560       570       580       590       600

     590      
pF1KB4 HAHSVNF
       :::::::
XP_006 HAHSVNF
              

>>XP_016863147 (OMIM: 605904) PREDICTED: PDZ and LIM dom  (498 aa)
 initn: 3133 init1: 2503 opt: 2519  Z-score: 1364.1  bits: 262.2 E(85289): 3.1e-69
Smith-Waterman score: 3090; 79.7% identity (80.2% similar) in 607 aa overlap (1-596:1-498)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::                       
XP_016 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
                                                                   
XP_016 ------------------------------------------------------------
                                                                   

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
                                 :::::::::::::::::::::::::::::::   
XP_016 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGNPG
                                 100       110       120       130 

               240       250       260       270       280         
pF1KB4 --------PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
               ::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVKIPPKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQI
             140       150       160       170       180       190 

     290       300       310       320       330       340         
pF1KB4 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTTAAAF
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
XP_016 TGTEHLKESEADNTKKANNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTSLTAAAAF
             200       210       220       230       240       250 

     350       360       370       380       390       400         
pF1KB4 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQDTLVQRAE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
XP_016 KPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQDTLVQRAE
             260       270       280       290       300       310 

     410       420       430       440       450       460         
pF1KB4 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCEL
             320       330       340       350       360       370 

     470       480       490       500       510       520         
pF1KB4 CYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
       ::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::
XP_016 CYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETD
             380       390       400       410       420       430 

     530       540       550       560       570       580         
pF1KB4 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKK
             440       450       460       470       480       490 

     590      
pF1KB4 HAHSVNF
       :::::::
XP_016 HAHSVNF
              

>>NP_001243355 (OMIM: 605904) PDZ and LIM domain protein  (625 aa)
 initn: 2688 init1: 2058 opt: 2058  Z-score: 1117.5  bits: 216.9 E(85289): 1.7e-55
Smith-Waterman score: 2825; 65.9% identity (66.3% similar) in 734 aa overlap (1-596:1-625)

               10        20        30        40        50        60
pF1KB4 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB4 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKGEPKEVVKPVPITSPAVSKVTST
       :::::::::::::::::::::::::::::::::::::                       
NP_001 MTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQK-----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KB4 NNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHATTSSHASPSPVAAVTPPLFAASGLH
                                                                   
NP_001 ------------------------------------------------------------
                                                                   

              190       200       210       220       230          
pF1KB4 ANANLSADQSPSALSAGKTAVNVPRQPTVTSVCSETSQELAEGQRRGSQGDSKQQNG---
                                 :::::::::::::::::::::::::::::::   
NP_001 --------------------------PTVTSVCSETSQELAEGQRRGSQGDSKQQNGKIP
                                 100       110       120       130 

          240       250       260       270       280       290    
pF1KB4 ---PPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
          :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEH
             140       150       160       170       180       190 

          300                                                      
pF1KB4 LKESEADNTKKA------------------------------------------------
       ::::::::::::                                                
NP_001 LKESEADNTKKAKFDSALEDLPKSGPHPPATPQVLTIGSQVATLSKVATTYSSLSSSTGN
             200       210       220       230       240       250 

                                                                   
pF1KB4 ------------------------------------------------------------
                                                                   
NP_001 VEDSFEGFRNFSTFSSPARYSAAVLSSAAATVSAVIATKTRLYTPERYHSLLDALCISPV
             260       270       280       290       300       310 

                                310       320       330       340  
pF1KB4 ------------------------NNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTS
                               .:::::::::::::::::::::::::::::::::::
NP_001 SKPLAFSYLQSSRKSTGSIHVKKTSNSQEPSPQLASSVASTRSMPESLDSPTSGRPGVTS
             320       330       340       350       360       370 

            350       360       370       380       390       400  
pF1KB4 LTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSAAYSGSVAPANSALGQTQPSDQD
       ::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
NP_001 LTTAAAFKPVGSTGVIKSPSWQRPNQGVPSTGRISNSATYSGSVAPANSALGQTQPSDQD
             380       390       400       410       420       430 

            410       420       430       440       450       460  
pF1KB4 TLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEK
             440       450       460       470       480       490 

            470       480       490       500       510       520  
pF1KB4 GALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDG
       :::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_001 GALYCELCYEKFFAPECGRCQRKILGEVISALKQTWHVSCFVCVACGKPIRNNVFHLEDG
             500       510       520       530       540       550 

            530       540       550       560       570       580  
pF1KB4 EPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKK
             560       570       580       590       600       610 

            590      
pF1KB4 DKPLCKKHAHSVNF
       ::::::::::::::
NP_001 DKPLCKKHAHSVNF
             620     




596 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 21:55:40 2016 done: Sat Nov  5 21:55:41 2016
 Total Scan time: 11.190 Total Display time:  0.140

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com