Result of FASTA (ccds) for pF1KB6611
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6611, 412 aa
  1>>>pF1KB6611 412 - 412 aa - 412 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8979+/-0.000796; mu= 20.0891+/- 0.048
 mean_var=76.7236+/-15.043, 0's: 0 Z-trim(108.0): 63  B-trim: 20 in 1/52
 Lambda= 0.146423
 statistics sampled from 9857 (9924) to 9857 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.305), width:  16
 Scan time:  2.450

The best scores are:                                      opt bits E(32554)
CCDS14304.1 SUV39H1 gene_id:6839|Hs108|chrX        ( 412) 2894 620.8 7.4e-178
CCDS65252.1 SUV39H1 gene_id:6839|Hs108|chrX        ( 423) 2870 615.7 2.5e-176
CCDS53494.1 SUV39H2 gene_id:79723|Hs108|chr10      ( 410) 1590 345.3 6.1e-95
CCDS7104.1 SUV39H2 gene_id:79723|Hs108|chr10       ( 350) 1398 304.7 8.9e-83
CCDS53493.1 SUV39H2 gene_id:79723|Hs108|chr10      ( 230)  530 121.2   1e-27
CCDS7050.2 EHMT1 gene_id:79813|Hs108|chr9          (1298)  537 123.4 1.3e-27
CCDS4726.1 EHMT2 gene_id:10919|Hs108|chr6          (1176)  531 122.0 2.9e-27
CCDS4725.1 EHMT2 gene_id:10919|Hs108|chr6          (1210)  531 122.1 2.9e-27
CCDS75425.1 EHMT2 gene_id:10919|Hs108|chr6         (1233)  531 122.1   3e-27
CCDS63528.1 SETMAR gene_id:6419|Hs108|chr3         ( 365)  467 108.0 1.5e-23
CCDS2563.2 SETMAR gene_id:6419|Hs108|chr3          ( 684)  467 108.3 2.3e-23
CCDS82129.1 EZH1 gene_id:2145|Hs108|chr17          ( 707)  347 83.0   1e-15
CCDS82130.1 EZH1 gene_id:2145|Hs108|chr17          ( 738)  347 83.0   1e-15
CCDS32659.1 EZH1 gene_id:2145|Hs108|chr17          ( 747)  347 83.0   1e-15
CCDS56517.1 EZH2 gene_id:2146|Hs108|chr7           ( 695)  334 80.2 6.6e-15
CCDS5892.1 EZH2 gene_id:2146|Hs108|chr7            ( 707)  334 80.2 6.7e-15
CCDS56518.1 EZH2 gene_id:2146|Hs108|chr7           ( 737)  334 80.2 6.9e-15
CCDS56516.1 EZH2 gene_id:2146|Hs108|chr7           ( 746)  334 80.2   7e-15
CCDS5891.1 EZH2 gene_id:2146|Hs108|chr7            ( 751)  334 80.2   7e-15
CCDS2749.2 SETD2 gene_id:29072|Hs108|chr3          (2564)  331 80.1 2.6e-14
CCDS1113.2 ASH1L gene_id:55870|Hs108|chr1          (2964)  321 78.1 1.3e-13
CCDS43729.1 WHSC1L1 gene_id:54904|Hs108|chr8       (1437)  316 76.7 1.6e-13
CCDS4413.1 NSD1 gene_id:64324|Hs108|chr5           (2427)  316 76.9 2.3e-13
CCDS4412.1 NSD1 gene_id:64324|Hs108|chr5           (2696)  316 77.0 2.5e-13
CCDS33940.1 WHSC1 gene_id:7468|Hs108|chr4          (1365)  301 73.5 1.4e-12


>>CCDS14304.1 SUV39H1 gene_id:6839|Hs108|chrX             (412 aa)
 initn: 2894 init1: 2894 opt: 2894  Z-score: 3306.6  bits: 620.8 E(32554): 7.4e-178
Smith-Waterman score: 2894; 100.0% identity (100.0% similar) in 412 aa overlap (1-412:1-412)

               10        20        30        40        50        60
pF1KB6 MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLCDYKKIREQEYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLCDYKKIREQEYY
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 KAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAVG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 CECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 CECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 IRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFD
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 LDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIRAGEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIRAGEE
              310       320       330       340       350       360

              370       380       390       400       410  
pF1KB6 LTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRKYLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRKYLF
              370       380       390       400       410  

>>CCDS65252.1 SUV39H1 gene_id:6839|Hs108|chrX             (423 aa)
 initn: 2870 init1: 2870 opt: 2870  Z-score: 3279.1  bits: 615.7 E(32554): 2.5e-176
Smith-Waterman score: 2870; 99.0% identity (99.5% similar) in 412 aa overlap (1-412:12-423)

                          10        20        30        40         
pF1KB6            MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLC
                  .:. : :::::::::::::::::::::::::::::::::::::::::::
CCDS65 MVGMSRLRNDRLADPLTGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLC
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KB6 DYKKIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 DYKKIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRH
               70        80        90       100       110       120

     110       120       130       140       150       160         
pF1KB6 LDPSLANYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 LDPSLANYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVG
              130       140       150       160       170       180

     170       180       190       200       210       220         
pF1KB6 EGITLNQVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EGITLNQVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCG
              190       200       210       220       230       240

     230       240       250       260       270       280         
pF1KB6 YDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 YDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQI
              250       260       270       280       290       300

     290       300       310       320       330       340         
pF1KB6 YDRQGATYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 YDRQGATYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF
              310       320       330       340       350       360

     350       360       370       380       390       400         
pF1KB6 FATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 FATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRK
              370       380       390       400       410       420

     410  
pF1KB6 YLF
       :::
CCDS65 YLF
          

>>CCDS53494.1 SUV39H2 gene_id:79723|Hs108|chr10           (410 aa)
 initn: 1620 init1: 925 opt: 1590  Z-score: 1817.9  bits: 345.3 E(32554): 6.1e-95
Smith-Waterman score: 1658; 59.3% identity (78.0% similar) in 410 aa overlap (8-411:13-409)

                    10        20        30        40        50     
pF1KB6      MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLCDYKKIR
                   : : :  : . ::.:::  ::.: ..::.:::: ..::::::::: ..
CCDS53 MAAVGAEARGAWC-VPCLVSLDTLQELCRKEKLTCKSIGITKRNLNNYEVEYLCDYKVVK
               10         20        30        40        50         

          60        70        80        90        100           110
pF1KB6 EQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLR-RHHRSKTPRH----L
       ..:::::::.:.::: .:::: :::::  .:.:: .: .  : . .. .. ::.     :
CCDS53 DMEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQQFSNDKHNYLSQVKKGKAITPKDNNKTL
      60        70        80        90       100       110         

              120       130       140       150       160       170
pF1KB6 DPSLANYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGE
        :..:.:.:.::::: ::.::..::: ...: : : ::: :::.:::  : :::::. . 
CCDS53 KPAIAEYIVKKAKQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPSDFYYINEYKPAP
     120       130       140       150       160       170         

               180       190       200       210       220         
pF1KB6 GITL-NQVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCG
       ::.: :... :: : ::..     :::. .   .::: . :...  : :::::::::.::
CCDS53 GISLVNEATFGCSCTDCFFQK---CCPAEAGVLLAYNKNQQIKIPPGTPIYECNSRCQCG
     180       190       200          210       220       230      

     230       240       250       260       270       280         
pF1KB6 YDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQI
        :::::.:::: .:.::::::..::::::.:: ::.. :::::::::.:::::::::::.
CCDS53 PDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQF
        240       250       260       270       280       290      

     290       300       310       320       330       340         
pF1KB6 YDRQGATYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF
       :: .: ::::::::  : .::::: :::.::::::::::::::.:::::::: ::::::.
CCDS53 YDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIAL
        300       310       320       330       340       350      

     350       360       370       380       390       400         
pF1KB6 FATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRK
       :.:::: :::::::::.:.    :. :  .: .      :.  :::::  ::::. .:: 
CCDS53 FSTRTINAGEELTFDYQMK-GSGDISSDSIDHS------PA--KKRVRTVCKCGAVTCRG
        360       370        380             390         400       

     410  
pF1KB6 YLF
       :: 
CCDS53 YLN
       410

>>CCDS7104.1 SUV39H2 gene_id:79723|Hs108|chr10            (350 aa)
 initn: 1429 init1: 925 opt: 1398  Z-score: 1599.6  bits: 304.7 E(32554): 8.9e-83
Smith-Waterman score: 1466; 60.0% identity (78.3% similar) in 360 aa overlap (58-411:2-349)

        30        40        50        60        70        80       
pF1KB6 LSCPALGISKRNLYDFEVEYLCDYKKIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILK
                                     :::::::.:.::: .:::: :::::  .:.
CCDS71                              MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ
                                            10        20        30 

        90        100           110       120       130       140  
pF1KB6 QFHKDLERELLR-RHHRSKTPRH----LDPSLANYLVQKAKQRRALRRWEQELNAKRSHL
       :: .: .  : . .. .. ::.     : :..:.:.:.::::: ::.::..::: ...: 
CCDS71 QFSNDKHNYLSQVKKGKAITPKDNNKTLKPAIAEYIVKKAKQRIALQRWQDELNRRKNHK
              40        50        60        70        80        90 

            150       160       170        180       190       200 
pF1KB6 GRITVENEVDLDGPPRAFVYINEYRVGEGITL-NQVAVGCECQDCLWAPTGGCCPGASLH
       : : ::: :::.:::  : :::::. . ::.: :... :: : ::..     :::. .  
CCDS71 GMIFVENTVDLEGPPSDFYYINEYKPAPGISLVNEATFGCSCTDCFFQK---CCPAEAGV
             100       110       120       130       140           

             210       220       230       240       250       260 
pF1KB6 KFAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTL
        .::: . :...  : :::::::::.:: :::::.:::: .:.::::::..::::::.::
CCDS71 LLAYNKNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTL
      150       160       170       180       190       200        

             270       280       290       300       310       320 
pF1KB6 EKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGATYLFDLDYVEDVYTVDAAYYGNISHF
        ::.. :::::::::.:::::::::::.:: .: ::::::::  : .::::: :::.:::
CCDS71 VKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFTVDAARYGNVSHF
      210       220       230       240       250       260        

             330       340       350       360       370       380 
pF1KB6 VNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDS
       :::::::::::.:::::::: ::::::.:.:::: :::::::::.:. .  :. :  .: 
CCDS71 VNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSG-DISSDSIDH
      270       280       290       300       310        320       

             390       400       410  
pF1KB6 NFGLAGLPGSPKKRVRIECKCGTESCRKYLF
       .      :.  :::::  ::::. .:: :: 
CCDS71 S------PA--KKRVRTVCKCGAVTCRGYLN
             330         340       350

>>CCDS53493.1 SUV39H2 gene_id:79723|Hs108|chr10           (230 aa)
 initn: 971 init1: 504 opt: 530  Z-score: 611.0  bits: 121.2 E(32554): 1e-27
Smith-Waterman score: 614; 36.4% identity (45.0% similar) in 404 aa overlap (8-411:13-229)

                    10        20        30        40        50     
pF1KB6      MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFEVEYLCDYKKIR
                   : : :  : . ::.:::  ::.: ..::.:::: ..::::::::: ..
CCDS53 MAAVGAEARGAWC-VPCLVSLDTLQELCRKEKLTCKSIGITKRNLNNYEVEYLCDYKVVK
               10         20        30        40        50         

          60        70        80        90       100       110     
pF1KB6 EQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLA
       ..:::::::.:.::: .:::: :::::  .:.:: .:               .:      
CCDS53 DMEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQQFSND---------------KH------
      60        70        80        90                             

         120       130       140       150       160       170     
pF1KB6 NYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGEGITLN
       ::: :                                                       
CCDS53 NYLSQ-------------------------------------------------------
      100                                                          

         180       190       200       210       220       230     
pF1KB6 QVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLPIYECNSRCRCGYDCPNR
                                                                   
CCDS53 ------------------------------------------------------------
                                                                   

         240       250       260       270       280       290     
pF1KB6 VVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGA
                                                .:::::::::::.:: .: 
CCDS53 -----------------------------------------VITSEEAERRGQFYDNKGI
                                                    110       120  

         300       310       320       330       340       350     
pF1KB6 TYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRTI
       ::::::::  : .::::: :::.::::::::::::::.:::::::: ::::::.:.::::
CCDS53 TYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTI
            130       140       150       160       170       180  

         360       370       380       390       400       410  
pF1KB6 RAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRKYLF
        :::::::::.:.    :. :  .: .      :.  :::::  ::::. .:: :: 
CCDS53 NAGEELTFDYQMK-GSGDISSDSIDHS------PA--KKRVRTVCKCGAVTCRGYLN
            190        200             210         220       230

>>CCDS7050.2 EHMT1 gene_id:79813|Hs108|chr9               (1298 aa)
 initn: 589 init1: 255 opt: 537  Z-score: 609.3  bits: 123.4 E(32554): 1.3e-27
Smith-Waterman score: 537; 41.2% identity (64.6% similar) in 226 aa overlap (149-365:1027-1242)

      120       130       140       150       160       170        
pF1KB6 VQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGEGITLNQVA
                                     : :: .  :  . :...  :   .....  
CCDS70 DSAPDRPSPVERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNI
       1000      1010      1020      1030      1040      1050      

      180           190       200       210           220       230
pF1KB6 VG---CEC-QDCLWAPTGGCCPGASLHKFAYNDQGQV--RLRAGLP--IYECNSRCRCGY
       .    : : .::    ...:  :    .  :. .:..  ..  . :  :.:::  : :  
CCDS70 THLQYCVCIDDC---SSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWR
       1060         1070      1080      1090      1100      1110   

              240       250       260       270       280       290
pF1KB6 DCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIY
       .: :::::.:.:  : ..:: :  :::::.:. :  ..:: :::::.:.. ::. : .  
CCDS70 NCRNRVVQNGLRARLQLYRTRD-MGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE--
          1120      1130       1140      1150      1160      1170  

              300        310       320       330       340         
pF1KB6 DRQGATYLFDLDYVE-DVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF
       :    .::::::  . .:: .:: .:::.:.:.:: :.:::    ::. . : :.:::::
CCDS70 D----SYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAF
                 1180      1190      1200      1210      1220      

     350       360       370       380       390       400         
pF1KB6 FATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESCRK
       :.:: :.:::.: :::                                            
CCDS70 FSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRHSSAALAQRQASAAQEAQEDGL
       1230      1240      1250      1260      1270      1280      

>>CCDS4726.1 EHMT2 gene_id:10919|Hs108|chr6               (1176 aa)
 initn: 555 init1: 262 opt: 531  Z-score: 603.0  bits: 122.0 E(32554): 2.9e-27
Smith-Waterman score: 535; 37.7% identity (59.7% similar) in 273 aa overlap (149-408:905-1142)

      120       130       140       150       160             170  
pF1KB6 VQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINE------YRVGEGI
                                     : :: .  :. . ::.:      . . ..:
CCDS47 LGVGNRAIRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNI
          880       890       900       910       920       930    

            180        190       200       210            220      
pF1KB6 TLNQVAVGCEC-QDCLWAPTGGCCPGASLHKFAYNDQGQV-----RLRAGLPIYECNSRC
       :  :    : : .::    ...:  :    .  :. .:..     ...  : :.:::. :
CCDS47 THLQ---HCTCVDDC---SSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPL-IFECNQAC
             940          950       960       970        980       

        230       240       250       260       270       280      
pF1KB6 RCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERR
        :  .: :::::.::.  : ..::    :::::.:. : ...:. :::::.:.. ::. :
CCDS47 SCWRNCKNRVVQSGIKVRLQLYRTAK-MGWGVRALQTIPQGTFICEYVGELISDAEADVR
       990      1000      1010       1020      1030      1040      

        290       300        310       320       330       340     
pF1KB6 GQIYDRQGATYLFDLDYVE-DVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLP
             .  .::::::  . .:: .:: ::::::.:.:: ::::.    ::. . : :.:
CCDS47 ------EDDSYLFDLDNKDGEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFP
             1050      1060      1070      1080      1090      1100

         350       360       370       380       390       400     
pF1KB6 RIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTE
       :::::..: ::.:::: :::. .    :..:  .                    :.::.:
CCDS47 RIAFFSSRDIRTGEELGFDYGDRF--WDIKSKYFT-------------------CQCGSE
             1110      1120        1130                            

         410                                
pF1KB6 SCRKYLF                              
       .:.                                  
CCDS47 KCKHSAEAIALEQSRLARLDPHPELLPELGSLPPVNT
    1140      1150      1160      1170      

>>CCDS4725.1 EHMT2 gene_id:10919|Hs108|chr6               (1210 aa)
 initn: 519 init1: 262 opt: 531  Z-score: 602.9  bits: 122.1 E(32554): 2.9e-27
Smith-Waterman score: 535; 37.7% identity (59.7% similar) in 273 aa overlap (149-408:939-1176)

      120       130       140       150       160             170  
pF1KB6 VQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINE------YRVGEGI
                                     : :: .  :. . ::.:      . . ..:
CCDS47 LGVGNRAIRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNI
      910       920       930       940       950       960        

            180        190       200       210            220      
pF1KB6 TLNQVAVGCEC-QDCLWAPTGGCCPGASLHKFAYNDQGQV-----RLRAGLPIYECNSRC
       :  :    : : .::    ...:  :    .  :. .:..     ...  : :.:::. :
CCDS47 THLQ---HCTCVDDC---SSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPL-IFECNQAC
      970          980          990      1000      1010       1020 

        230       240       250       260       270       280      
pF1KB6 RCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERR
        :  .: :::::.::.  : ..::    :::::.:. : ...:. :::::.:.. ::. :
CCDS47 SCWRNCKNRVVQSGIKVRLQLYRTAK-MGWGVRALQTIPQGTFICEYVGELISDAEADVR
            1030      1040       1050      1060      1070      1080

        290       300        310       320       330       340     
pF1KB6 GQIYDRQGATYLFDLDYVE-DVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLP
             .  .::::::  . .:: .:: ::::::.:.:: ::::.    ::. . : :.:
CCDS47 ------EDDSYLFDLDNKDGEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFP
                   1090      1100      1110      1120      1130    

         350       360       370       380       390       400     
pF1KB6 RIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTE
       :::::..: ::.:::: :::. .    :..:  .                    :.::.:
CCDS47 RIAFFSSRDIRTGEELGFDYGDRF--WDIKSKYFT-------------------CQCGSE
         1140      1150        1160                         1170   

         410                                
pF1KB6 SCRKYLF                              
       .:.                                  
CCDS47 KCKHSAEAIALEQSRLARLDPHPELLPELGSLPPVNT
          1180      1190      1200      1210

>>CCDS75425.1 EHMT2 gene_id:10919|Hs108|chr6              (1233 aa)
 initn: 555 init1: 262 opt: 531  Z-score: 602.7  bits: 122.1 E(32554): 3e-27
Smith-Waterman score: 535; 37.7% identity (59.7% similar) in 273 aa overlap (149-408:962-1199)

      120       130       140       150       160             170  
pF1KB6 VQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINE------YRVGEGI
                                     : :: .  :. . ::.:      . . ..:
CCDS75 LGVGNRAIRTEKIICRDVARGYENVPIPCVNGVDGEPCPEDYKYISENCETSTMNIDRNI
             940       950       960       970       980       990 

            180        190       200       210            220      
pF1KB6 TLNQVAVGCEC-QDCLWAPTGGCCPGASLHKFAYNDQGQV-----RLRAGLPIYECNSRC
       :  :    : : .::    ...:  :    .  :. .:..     ...  : :.:::. :
CCDS75 THLQ---HCTCVDDC---SSSNCLCGQLSIRCWYDKDGRLLQEFNKIEPPL-IFECNQAC
               1000         1010      1020      1030       1040    

        230       240       250       260       270       280      
pF1KB6 RCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERR
        :  .: :::::.::.  : ..::    :::::.:. : ...:. :::::.:.. ::. :
CCDS75 SCWRNCKNRVVQSGIKVRLQLYRTAK-MGWGVRALQTIPQGTFICEYVGELISDAEADVR
         1050      1060      1070       1080      1090      1100   

        290       300        310       320       330       340     
pF1KB6 GQIYDRQGATYLFDLDYVE-DVYTVDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLP
             .  .::::::  . .:: .:: ::::::.:.:: ::::.    ::. . : :.:
CCDS75 ------EDDSYLFDLDNKDGEVYCIDARYYGNISRFINHLCDPNIIPVRVFMLHQDLRFP
                1110      1120      1130      1140      1150       

         350       360       370       380       390       400     
pF1KB6 RIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTE
       :::::..: ::.:::: :::. .    :..:  .                    :.::.:
CCDS75 RIAFFSSRDIRTGEELGFDYGDRF--WDIKSKYFT-------------------CQCGSE
      1160      1170      1180        1190                         

         410                                
pF1KB6 SCRKYLF                              
       .:.                                  
CCDS75 KCKHSAEAIALEQSRLARLDPHPELLPELGSLPPVNT
       1200      1210      1220      1230   

>>CCDS63528.1 SETMAR gene_id:6419|Hs108|chr3              (365 aa)
 initn: 442 init1: 147 opt: 467  Z-score: 536.5  bits: 108.0 E(32554): 1.5e-23
Smith-Waterman score: 497; 34.7% identity (59.1% similar) in 274 aa overlap (157-411:48-298)

        130       140       150       160       170          180   
pF1KB6 ALRRWEQELNAKRSHLGRITVENEVDLDGPPRAFVYINEYRVGEGITLNQVAV---GCEC
                                     :  : :  .. :: :  .. . .   :: :
CCDS63 KEKPEAPTEQLDVACGQENLPVGAWPPGAAPAPFQYTPDHVVGPGADIDPTQITFPGCIC
        20        30        40        50        60        70       

             190       200       210            220       230      
pF1KB6 --QDCLWAPTGGCCPGASLHKFAYNDQGQVR-LRAG----LPIYECNSRCRCGYDCPNRV
           ::  :  : :     :   :.:.. .: . .:     :..:::  :::.  : :::
CCDS63 VKTPCL--P--GTCSCLR-HGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCSDHCRNRV
        80            90        100       110       120       130  

        240       250       260       270       280       290      
pF1KB6 VQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGEIITSEEAERRGQIYDRQGAT
       ::::... . .:.:   .:::.:::: : :. :: ::.::..   :..:: ..  .. ..
CCDS63 VQKGLQFHFQVFKTHK-KGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSN
            140        150       160       170       180       190 

        300              310       320       330       340         
pF1KB6 YLFDLDYVEDVYT-------VDAAYYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIAF
       :.. .   : ::.       :: .: :::..:.::::.::: .  : ::..   .:..:.
CCDS63 YIIAIR--EHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSM---VPKLAL
               200       210       220       230       240         

     350       360       370         380       390       400       
pF1KB6 FATRTIRAGEELTFDYNMQVD--PVDMESTRMDSNFGLAGLPGSPKKRVRIECKCGTESC
       ::.. :   :::..::. .     :. .. :.: .            ..:  : ::..::
CCDS63 FAAKDIVPEEELSYDYSGRYLNLTVSEDKERLDHG------------KLRKPCYCGAKSC
        250       260       270       280                   290    

       410                                                         
pF1KB6 RKYLF                                                       
         .:                                                        
CCDS63 TAFLPFDSSLYCPVEKSNISCGNEKEPSMCGSAPSVFPSCKRLTLEVSLFSDKQLAPPYS
          300       310       320       330       340       350    




412 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:04:59 2016 done: Sat Nov  5 11:05:00 2016
 Total Scan time:  2.450 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com