Result of GENSCAN for pF1KE1426
GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:54:59

Sequence gi568815594r:176583929_176892311 : 308383 bp : 36.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12709  12871  163  0  1   89   28   167 0.090   9.43
 1.02 Intr +  16294  16361   68  2  2   96   77    10 0.056  -1.59
 1.03 Intr +  22974  23150  177  2  0   56   37   185 0.311   9.39
 1.04 Term +  24484  24555   72  0  0   81   49    79 0.881   0.23
 1.05 PlyA +  25016  25021    6                               1.05

 2.03 PlyA -  26310  26305    6                               1.05
 2.02 Term -  41714  41170  545  0  2   57   48   280 0.803  14.34
 2.01 Init -  46239  46125  115  0  1   78   60    94 0.791   6.02
 2.00 Prom -  46841  46802   40                              -7.95

 3.04 PlyA -  46938  46933    6                              -0.45
 3.03 Term -  47619  47475  145  2  1  100   32   181 0.194  10.10
 3.02 Intr -  50972  50825  148  0  1   49   64    92 0.060   1.27
 3.01 Init -  74785  74695   91  1  1   79   52   103 0.608   6.50
 3.00 Prom -  91122  91083   40                              -6.05

 4.05 PlyA -  92546  92541    6                               1.05
 4.04 Term - 100112  99998  115  1  1  108   44   109 0.650   5.56
 4.03 Intr - 103592 103259  334  0  1   21  110   208 0.082  10.01
 4.02 Intr - 104043 103893  151  0  1   48  103    77 0.070   4.01
 4.01 Init - 104920 104813  108  1  0   76   69    69 0.060   4.07
 4.00 Prom - 105210 105171   40                              -7.95

 5.00 Prom + 106653 106692   40                              -8.45
 5.01 Init + 109092 109803  712  2  1   88   47   606 0.676  51.60
 5.02 Intr + 111388 111635  248  2  2   46   41   205 0.134   7.86
 5.03 Term + 111928 112863  936  0  0  -27   36   332 0.124   7.62
 5.04 PlyA + 112971 112976    6                               1.05

 6.00 Prom + 113735 113774   40                              -3.65
 6.01 Init + 129749 129937  189  1  0   21   89   160 0.335   8.46
 6.02 Intr + 143105 143191   87  1  0   29   85    90 0.000   2.05
 6.03 Intr + 177841 177999  159  0  0   76  116    29 0.373   3.76
 6.04 Term + 183886 184146  261  0  0   55   44   247 0.767  11.54
 6.05 PlyA + 185120 185125    6                               1.05

 7.03 PlyA - 185638 185633    6                               1.05
 7.02 Term - 207870 207685  186  0  0   64   50    68 0.555  -2.89
 7.01 Init - 208383 208237  147  0  0   92   90   243 0.985  23.04
 7.00 Prom - 224103 224064   40                              -6.25

 8.00 Prom + 242863 242902   40                              -3.65
 8.01 Init + 244735 244900  166  0  1   52  101   115 0.779   9.04
 8.02 Intr + 250993 251100  108  2  0   90   89    16 0.427   1.24
 8.03 Term + 256487 256623  137  0  2   70   40   120 0.408   2.60
 8.04 PlyA + 258230 258235    6                               1.05

 9.02 PlyA - 258411 258406    6                               1.05
 9.01 Sngl - 286962 286630  333  0  0   71   44   193 0.919   8.97
 9.00 Prom - 307261 307222   40                              -2.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 103999 103893  107  2  2   95  103    73 0.870   8.51
S.002 Term - 140979 140828  152  1  2   85   39    96 0.864   1.49
S.003 Intr - 145818 145605  214  0  1   88  106   144 0.996  13.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_1|159_aa
AVKEDVELLSFTFGDMKNDPEIWRKYRGHQQSSRKPSGSSKTQESSGVWLNAQCDWVNSK
ALSSNSKVLSSAWLILLKRKRYRHSEGYVKMEREAGFMQPPATEQQRQPLEVEKAPPSHG
AFPCRRLGFRFPASGTSTTAAAAKCYRKVAVKIHSIGQC

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_1|480_bp
gcagtcaaagaggatgtggagctactatcattcacttttggagatatgaaaaatgacccg
gagatttggagaaagtatagagggcaccagcagagctctcgcaagcctagtggcagcagc
aaaacacaagaatccagtggtgtttggttaaatgcccagtgtgattgggttaattcaaaa
gccttatcttcaaactctaaagttctttcttctgcttggttgattctattgaagaggaaa
agatacagacacagcgaaggctatgtgaagatggagagagaggctggatttatgcagcca
ccagccacagaacaacagcgacagccactagaagttgaaaaggctccaccttctcacgga
gcatttccttgccgacgccttggtttcaggtttccggcttctggaactagcaccacagca
gcagcagccaaatgttataggaaagttgcagtaaagattcattcgattggacaatgttga

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_2|219_aa
MECYTVVKKSEIMSFAATWMQLDAIILSELTQKQKTKYTLEPFSPPLRCGSPFLGWPRPE
LAPSACREVWRERREQEPGLCAVLVDQLEFRVGVGLAGPHSEQPAGPVAPGNEGLSTRAS
GCGGCTGSPNSASPPALRSISHRALAAFLRGRARDLQPAMPEPPTPSMDSFAAGASLMSA
APCSKAPSPINHPRAEGCGVTARDWPASSTCIPGAGSRG

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_2|660_bp
atggaatgctacacagtcgtaaaaaagagtgaaatcatgtcctttgcagcaacatggatg
cagctggatgccattatcctaagtgaactaacacagaaacagaaaaccaaatacacactt
gagcccttcagcccgccgctgcgctgtgggagcccctttctgggctggccaaggccggag
ctggctccctcagcttgcagggaggtgtggagggagaggcgcgagcaggaaccggggctg
tgcgcggtgcttgtggaccagctggagttccgggtgggcgtgggcttggcgggcccgcac
tcggagcagccggccggccctgtcgccccgggcaatgaggggcttagcacccgggccagc
ggctgtggagggtgtaccgggtcccccaacagtgccagcccaccggcgctgcgctcgatt
tctcaccgggccttagctgcctttctgcggggcagggctcgggacctgcagcccgccatg
cctgagcctcccaccccctccatggactcctttgcggccggagcctccctgatgagcgcc
gccccctgctccaaggcgcccagtcccatcaaccacccaagggctgaggggtgcggagtc
acagcgcgggactggccggccagctccacctgcatccctggtgcgggatccagggggtga

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_3|127_aa
MTRVEQRAQDEYKSCGEELSGCGSKPYQGTVSYIVAHKGMTSRIWVWKLCPTALLVQAFF
LVGAQQLLICNMTLGHGALSSQVLITLGKPLNLQGELEAVMGSHEDLTPESHEGLTPPSQ
QLTSEHP

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_3|384_bp
atgactcgggtggaacaaagagcccaggatgaatataagagctgcggagaagaactctca
ggttgtgggtctaagccttatcaaggaactgtgagctacatcgtcgcccataagggtatg
actagtaggatttgggtctggaagctctgcccaacagctctactggtccaggcatttttc
cttgttggtgctcagcaacttctcatctgcaacatgactttgggccatggtgccctgagc
tcacaggtcctgataacattaggaaagcccctgaatcttcagggagagcttgaagctgtg
atgggatcacatgaagatttgactccagagtcacatgaaggtttgactccaccttcacag
cagctgacctctgagcacccataa

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_4|235_aa
MADARCGGENEQAELVIYVHPREGSCHVGTNREGSQVPVTPLLNLVCFFQRCQAANKTCP
TNYMWNNHICRCLAQEDFMFSSDAGDDSTDGFHDICGPNKELDEETCQCVCRAGLRPASC
GPHKELDRNSCQCVCKNKLFPSQCGANREFDENTCQCVCKRTCPRNQPLNPGKCACECTE
SPQKCLLKGKKFHHQTCSCYRRPCTNRQKACEPGFSYSEEVCRCVPSYWKRPQMS

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_4|708_bp
atggctgatgccaggtgtggaggagaaaatgagcaagctgagcttgtgatatatgttcac
cccagagagggctcatgtcacgtgggcaccaacagagaggggtctcaggtaccagttaca
ccattgctaaacctcgtctgtttcttccaaaggtgtcaggcagcgaacaagacctgcccc
accaattacatgtggaataatcacatctgcagatgcctggctcaggaagattttatgttt
tcctcggatgctggagatgactcaacagatggattccatgacatctgtggaccaaacaag
gagctggatgaagagacctgtcagtgtgtctgcagagcggggcttcggcctgccagctgt
ggaccccacaaagaactagacagaaactcatgccagtgtgtctgtaaaaacaaactcttc
cccagccaatgtggggccaaccgagaatttgatgaaaacacatgccagtgtgtatgtaaa
agaacctgccccagaaatcaacccctaaatcctggaaaatgtgcctgtgaatgtacagaa
agtccacagaaatgcttgttaaaaggaaagaagttccaccaccaaacatgcagctgttac
agacggccatgtacgaaccgccagaaggcttgtgagccaggattttcatatagtgaagaa
gtgtgtcgttgtgtcccttcatattggaaaagaccacaaatgagctaa

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_5|631_aa
MGKKQNRKTGKSKKQSASPPPKKHSSLPAMEQSWMENNFDELREEGFRRSNYSELQEDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCNQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLCLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRMPQRYSSRRATPRHITVRFTKVEMKEKMLRAAREKEIQ
TTIREYYKHLYANKLENLEEMNKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTK
KSPGPDGFTAQFYQRYKEELHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDG
TYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKE
IKGIQLGKEEVKLSLFADNMIVYLENPIVSAKNLLKLISNFSKVSRYKINVQKSQALLYT
NNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPC
SWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRACITKSTLSQK
NKAGGITLPDFKLYHKATVTKTAWYWFKTEI

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_5|1896_bp
atggggaaaaaacagaacagaaaaactggaaagtctaaaaagcagagtgcctctcctcct
ccaaagaaacacagttccttaccagcaatggaacaaagctggatggagaataactttgac
gagctgcgagaagaaggcttcagacgatcaaattactctgagctacaggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcaatcaactggaagaaagagtatcagca
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctatgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataactgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaagaaatacaa
actaccatcagagaatactacaaacacctctatgcaaataaactagaaaatctagaagaa
atgaataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagacggattcacagcccaattctaccagaggtacaaggaggaactg
catataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcc
tttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatggg
acatatttcaaaataataagagctatctatgacaaacccacagccaatatcatactgaat
gggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctca
ccactactattcaacatagtgttggaagttctggccagggcaattaggcaggagaaggaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagacaacatg
attgtatatctagaaaaccccattgtctcagccaaaaatctccttaagctgataagcaac
ttcagcaaagtctccagatacaaaatcaatgtacaaaaatcacaagcactcttatacacc
aacaacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacaga
ttcaatgccatccccatcaagctaccaatgactttcttcacagaactggaaaaaactact
ttaaagttcatatggaaccaaaaaagagcctgcatcaccaagtcaaccctaagccaaaag
aacaaagctggaggcatcaccctacctgacttcaaactataccacaaggctacagtaacc
aaaacagcatggtactggttcaaaacagagatatag

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_6|231_aa
MSTLNEKRKCLRIETWGTGTSMRWEEAKELVNMSGKKHNNDGASGGETVKPTGARERGES
FKQRPEVHTISNNTFMVIASTYACSTASLLYHDTEIIKRKCFQADGRDQRRDEGMEYKMK
QQRVLEFRVGRSHQPGRKSGPRQRKLRIHSREVKIRTSETGKQNAALIQVEDDGGSGQRC
SKWLDSGYIFEDTAKRIGFPDESECRVGKKEVKDDTMNFDLTNSEQFVATD

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_6|696_bp
atgagcactctaaatgaaaagagaaaatgtctaagaatagaaacctggggcacaggaaca
tctatgaggtgggaagaggcaaaggaactagtgaatatgtctgggaagaagcataacaat
gatggagcatcaggaggggagactgtcaagccaacgggtgccagagaaagaggggagagc
ttcaaacagaggccagaggtgcacacaatttcaaacaacactttcatggttatcgccagc
acatacgcgtgttccacagccagcctcctctaccacgacacagaaataataaaaaggaag
tgctttcaggcagatggaagggatcagagaagagacgaaggcatggaatacaaaatgaaa
cagcagagagtgctagaattcagagttggaagaagccatcagcctggaagaaaatctggc
ccaagacagagaaagttgagaatacactctagggaggtgaagataagaaccagtgagact
ggtaaacagaacgctgccctgatccaagtggaagacgatggtggctcaggtcagagatgt
agcaagtggttagactctggttatatttttgaagacacagccaagaggattggattccct
gatgagtctgaatgtagggtaggaaagaaagaagtcaaggatgataccatgaattttgac
ttgaccaactcggagcaatttgttgccactgactga

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_7|110_aa
MHLLGFFSVACSLLAAALLPGPREAPAAAAAFESGLDLSDAEPDAGEATLIHGTPNRFWD
TGDQSTQPYFPGVFIVCRAPGAVSDFRKKVSGTLVTRLQSFQSSLEVGQT

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_7|333_bp
atgcacttgctgggcttcttctctgtggcgtgttctctgctcgccgctgcgctgctcccg
ggtcctcgcgaggcgcccgccgccgccgccgccttcgagtccggactcgacctctcggac
gcggagcccgacgcgggcgaggccacgctgattcatgggactccaaacagattctgggac
actggtgatcagtcaacccagccttactttcctggagtgttcatagtctgcagagcacca
ggcgctgtgagcgactttagaaaaaaagtgtcagggactttagtaaccaggctccagagc
tttcagagttcacttgaagttggtcagacttga

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_8|136_aa
MVWRFLKKQKIELLYDPVIPLLGIYPKELKSIYQQDVRSLVFIAASFTIAKIQEQSSIAA
NMESKENQNFRCENVLHLFHLHLTLHHKSRTAHPEPESSLCPEYPCSIYCLSVSHLVTAL
TVRSTVGSIIAVLVLK

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_8|411_bp
atggtatggaggttcctcaaaaagcaaaaaatagaactactctatgacccagtaatcccg
cttctgggtatctatccaaaggagctgaaatcaatatatcaacaggatgtccgttctctc
gtgtttattgcagcctcattcacaatagccaagatacaggaacaatcttcaattgcagcc
aacatggaatccaaagagaaccagaactttcgttgtgagaatgttttacacttattccat
ttacacttaacacttcatcataaaagtagaacagcccacccagaaccagaatcatccctt
tgtccagagtacccatgctctatatactgcctgtctgttagtcacttagtgactgctttg
actgtcagatcaactgtcggcagtatcatcgcagtgcttgtgttaaagtaa

>gi568815594r:176583929_176892311|GENSCAN_predicted_peptide_9|110_aa
MGKDFMTKTPKAIATKAKIDKWDLIKLESFCRAKETIISMNRQHREWEKIFAIYPSDKGL
ISGLYRELKQIYKKTNNPIKKWVKDMNRHFLKEDIYVANKHEKKLFITGH

>gi568815594r:176583929_176892311|GENSCAN_predicted_CDS_9|333_bp
atgggcaaagacttcatgactaaaacaccaaaagcaattgcaacaaaagccaaaattgac
aaatgggatctaattaaactagagagcttctgcagagcaaaagaaactatcatcagcatg
aacaggcaacatagagaatgggagaaaatttttgcaatctatccatctgacaaaggtcta
atatccggactctacagggaacttaaacaaatttacaagaaaacaaacaaccccatcaaa
aagtgggtgaaggacatgaacagacatttcttaaaagaagacatttatgtggccaataaa
catgaaaaaaagctcttcatcactggtcattag
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