Result of FASTA (ccds) for pF1KB0929
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0929, 136 aa
  1>>>pF1KB0929 136 - 136 aa - 136 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0019+/-0.000755; mu= 13.8173+/- 0.046
 mean_var=68.6565+/-13.806, 0's: 0 Z-trim(108.9): 25  B-trim: 233 in 1/48
 Lambda= 0.154787
 statistics sampled from 10491 (10514) to 10491 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.323), width:  16
 Scan time:  1.740

The best scores are:                                      opt bits E(32554)
CCDS1550.1 H3F3A gene_id:3020|Hs108|chr1           ( 136)  863 200.8 2.2e-52
CCDS11729.1 H3F3B gene_id:3021|Hs108|chr17         ( 136)  863 200.8 2.2e-52
CCDS41388.1 HIST2H3D gene_id:653604|Hs108|chr1     ( 136)  843 196.3 4.8e-51
CCDS30848.1 HIST2H3C gene_id:126961|Hs108|chr1     ( 136)  843 196.3 4.8e-51
CCDS30850.1 HIST2H3A gene_id:333932|Hs108|chr1     ( 136)  843 196.3 4.8e-51
CCDS4627.1 HIST1H3H gene_id:8357|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4638.1 HIST1H3J gene_id:8356|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4570.1 HIST1H3A gene_id:8350|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4636.1 HIST1H3I gene_id:8354|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4600.1 HIST1H3F gene_id:8968|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4590.1 HIST1H3D gene_id:8351|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4602.1 HIST1H3G gene_id:8355|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4596.1 HIST1H3E gene_id:8353|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4573.1 HIST1H3B gene_id:8358|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS4576.1 HIST1H3C gene_id:8352|Hs108|chr6        ( 136)  837 195.0 1.2e-50
CCDS1572.1 HIST3H3 gene_id:8290|Hs108|chr1         ( 136)  819 191.0   2e-49
CCDS31769.1 H3F3C gene_id:440093|Hs108|chr12       ( 135)  815 190.1 3.7e-49
CCDS1729.1 CENPA gene_id:1058|Hs108|chr2           ( 140)  373 91.4 1.9e-19


>>CCDS1550.1 H3F3A gene_id:3020|Hs108|chr1                (136 aa)
 initn: 863 init1: 863 opt: 863  Z-score: 1054.0  bits: 200.8 E(32554): 2.2e-52
Smith-Waterman score: 863; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS15 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS15 MPKDIQLARRIRGERA
              130      

>>CCDS11729.1 H3F3B gene_id:3021|Hs108|chr17              (136 aa)
 initn: 863 init1: 863 opt: 863  Z-score: 1054.0  bits: 200.8 E(32554): 2.2e-52
Smith-Waterman score: 863; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS11 MPKDIQLARRIRGERA
              130      

>>CCDS41388.1 HIST2H3D gene_id:653604|Hs108|chr1          (136 aa)
 initn: 843 init1: 843 opt: 843  Z-score: 1029.9  bits: 196.3 E(32554): 4.8e-51
Smith-Waterman score: 843; 97.1% identity (99.3% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS41 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. :::::::::::::::::::::::::::::
CCDS41 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS41 MPKDIQLARRIRGERA
              130      

>>CCDS30848.1 HIST2H3C gene_id:126961|Hs108|chr1          (136 aa)
 initn: 843 init1: 843 opt: 843  Z-score: 1029.9  bits: 196.3 E(32554): 4.8e-51
Smith-Waterman score: 843; 97.1% identity (99.3% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS30 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. :::::::::::::::::::::::::::::
CCDS30 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS30 MPKDIQLARRIRGERA
              130      

>>CCDS30850.1 HIST2H3A gene_id:333932|Hs108|chr1          (136 aa)
 initn: 843 init1: 843 opt: 843  Z-score: 1029.9  bits: 196.3 E(32554): 4.8e-51
Smith-Waterman score: 843; 97.1% identity (99.3% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS30 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. :::::::::::::::::::::::::::::
CCDS30 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS30 MPKDIQLARRIRGERA
              130      

>>CCDS4627.1 HIST1H3H gene_id:8357|Hs108|chr6             (136 aa)
 initn: 837 init1: 837 opt: 837  Z-score: 1022.6  bits: 195.0 E(32554): 1.2e-50
Smith-Waterman score: 837; 96.3% identity (98.5% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. ::::: :::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4638.1 HIST1H3J gene_id:8356|Hs108|chr6             (136 aa)
 initn: 837 init1: 837 opt: 837  Z-score: 1022.6  bits: 195.0 E(32554): 1.2e-50
Smith-Waterman score: 837; 96.3% identity (98.5% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. ::::: :::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4570.1 HIST1H3A gene_id:8350|Hs108|chr6             (136 aa)
 initn: 837 init1: 837 opt: 837  Z-score: 1022.6  bits: 195.0 E(32554): 1.2e-50
Smith-Waterman score: 837; 96.3% identity (98.5% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS45 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. ::::: :::::::::::::::::::::::
CCDS45 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS45 MPKDIQLARRIRGERA
              130      

>>CCDS4636.1 HIST1H3I gene_id:8354|Hs108|chr6             (136 aa)
 initn: 837 init1: 837 opt: 837  Z-score: 1022.6  bits: 195.0 E(32554): 1.2e-50
Smith-Waterman score: 837; 96.3% identity (98.5% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. ::::: :::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      

>>CCDS4600.1 HIST1H3F gene_id:8968|Hs108|chr6             (136 aa)
 initn: 837 init1: 837 opt: 837  Z-score: 1022.6  bits: 195.0 E(32554): 1.2e-50
Smith-Waterman score: 837; 96.3% identity (98.5% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KB0 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
       :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
CCDS46 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
       :::::::::::::::::::::::::::.:. ::::: :::::::::::::::::::::::
CCDS46 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
               70        80        90       100       110       120

              130      
pF1KB0 MPKDIQLARRIRGERA
       ::::::::::::::::
CCDS46 MPKDIQLARRIRGERA
              130      




136 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 17:58:18 2016 done: Sat Nov  5 17:58:18 2016
 Total Scan time:  1.740 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]
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