Result of FASTA (omim) for pF1KB0922
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0922, 345 aa
  1>>>pF1KB0922 345 - 345 aa - 345 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.6263+/-0.000325; mu= 5.9523+/- 0.020
 mean_var=156.5079+/-33.631, 0's: 0 Z-trim(121.7): 47  B-trim: 1891 in 2/53
 Lambda= 0.102519
 statistics sampled from 38708 (38813) to 38708 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.455), width:  16
 Scan time:  9.400

The best scores are:                                      opt bits E(85289)
NP_001032358 (OMIM: 607484) partitioning defective ( 345) 2310 353.0 5.5e-97
NP_058644 (OMIM: 607484) partitioning defective 6  ( 346) 2298 351.2 1.9e-96
XP_016878750 (OMIM: 607484) PREDICTED: partitionin ( 341) 2270 347.1 3.3e-95
XP_011521398 (OMIM: 607484) PREDICTED: partitionin ( 353) 1737 268.3 1.8e-71
XP_011521397 (OMIM: 607484) PREDICTED: partitionin ( 356) 1681 260.0 5.7e-69
XP_005256034 (OMIM: 607484) PREDICTED: partitionin ( 357) 1681 260.0 5.7e-69
NP_115910 (OMIM: 608975) partitioning defective 6  ( 372) 1085 171.9   2e-42
NP_115899 (OMIM: 608976) partitioning defective 6  ( 376) 1081 171.3 3.1e-42


>>NP_001032358 (OMIM: 607484) partitioning defective 6 h  (345 aa)
 initn: 2310 init1: 2310 opt: 2310  Z-score: 1862.2  bits: 353.0 E(85289): 5.5e-97
Smith-Waterman score: 2310; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGLLLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGLLLRP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB0 APQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHN
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB0 LIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQG
              250       260       270       280       290       300

              310       320       330       340     
pF1KB0 PPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       :::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
              310       320       330       340     

>>NP_058644 (OMIM: 607484) partitioning defective 6 homo  (346 aa)
 initn: 1697 init1: 1697 opt: 2298  Z-score: 1852.6  bits: 351.2 E(85289): 1.9e-96
Smith-Waterman score: 2298; 99.7% identity (99.7% similar) in 346 aa overlap (1-345:1-346)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10        20        30        40        50        60

               70        80        90        100       110         
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKR-EADSSGLAFASNSLQRRKKGLLLR
       ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_058 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRAEADSSGLAFASNSLQRRKKGLLLR
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB0 PVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 PVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVR
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB0 VAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 VAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSH
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB0 NLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 NLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQ
              250       260       270       280       290       300

     300       310       320       330       340     
pF1KB0 GPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       ::::::::::::::::::::::::::::::::::::::::::::::
NP_058 GPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
              310       320       330       340      

>>XP_016878750 (OMIM: 607484) PREDICTED: partitioning de  (341 aa)
 initn: 2175 init1: 2175 opt: 2270  Z-score: 1830.3  bits: 347.1 E(85289): 3.3e-95
Smith-Waterman score: 2270; 98.8% identity (98.8% similar) in 345 aa overlap (1-345:1-341)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       :::::::::::::::::    :::::::::::::::::::::::::::::::::::::::
XP_016 MARPQRTPARSPDSIVE----FDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10            20        30        40        50      

               70        80        90       100       110       120
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGLLLRP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGLLLRP
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB0 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGMSVRV
        120       130       140       150       160       170      

              190       200       210       220       230       240
pF1KB0 APQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVANSHN
        180       190       200       210       220       230      

              250       260       270       280       290       300
pF1KB0 LIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENRQPPSSNGLSQG
        240       250       260       270       280       290      

              310       320       330       340     
pF1KB0 PPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       :::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
        300       310       320       330       340 

>>XP_011521398 (OMIM: 607484) PREDICTED: partitioning de  (353 aa)
 initn: 2161 init1: 1681 opt: 1737  Z-score: 1404.1  bits: 268.3 E(85289): 1.8e-71
Smith-Waterman score: 2236; 95.5% identity (95.5% similar) in 357 aa overlap (1-345:1-353)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       :::::::::::::::::    :::::::::::::::::::::::::::::::::::::::
XP_011 MARPQRTPARSPDSIVE----FDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10            20        30        40        50      

               70        80        90                   100        
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKR------------EADSSGLAFASNS
       :::::::::::::::::::::::::::::::::::            :::::::::::::
XP_011 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWAEADSSGLAFASNS
         60        70        80        90       100       110      

      110       120       130       140       150       160        
pF1KB0 LQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPL
        120       130       140       150       160       170      

      170       180       190       200       210       220        
pF1KB0 GFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLD
        180       190       200       210       220       230      

      230       240       250       260       270       280        
pF1KB0 QVTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIEN
        240       250       260       270       280       290      

      290       300       310       320       330       340     
pF1KB0 RQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
        300       310       320       330       340       350   

>>XP_011521397 (OMIM: 607484) PREDICTED: partitioning de  (356 aa)
 initn: 2296 init1: 1681 opt: 1681  Z-score: 1359.3  bits: 260.0 E(85289): 5.7e-69
Smith-Waterman score: 2278; 96.9% identity (96.9% similar) in 356 aa overlap (1-345:1-356)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10        20        30        40        50        60

               70        80        90                  100         
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKR-----------EADSSGLAFASNSL
       :::::::::::::::::::::::::::::::::::           ::::::::::::::
XP_011 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWEADSSGLAFASNSL
               70        80        90       100       110       120

     110       120       130       140       150       160         
pF1KB0 QRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLG
              130       140       150       160       170       180

     170       180       190       200       210       220         
pF1KB0 FYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQ
              190       200       210       220       230       240

     230       240       250       260       270       280         
pF1KB0 VTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIENR
              250       260       270       280       290       300

     290       300       310       320       330       340     
pF1KB0 QPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
              310       320       330       340       350      

>>XP_005256034 (OMIM: 607484) PREDICTED: partitioning de  (357 aa)
 initn: 2296 init1: 1681 opt: 1681  Z-score: 1359.2  bits: 260.0 E(85289): 5.7e-69
Smith-Waterman score: 2276; 96.6% identity (96.6% similar) in 357 aa overlap (1-345:1-357)

               10        20        30        40        50        60
pF1KB0 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLG
               10        20        30        40        50        60

               70        80        90                   100        
pF1KB0 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKR------------EADSSGLAFASNS
       :::::::::::::::::::::::::::::::::::            :::::::::::::
XP_005 YTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRGEEGYSGQPLWAEADSSGLAFASNS
               70        80        90       100       110       120

      110       120       130       140       150       160        
pF1KB0 LQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LQRRKKGLLLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPL
              130       140       150       160       170       180

      170       180       190       200       210       220        
pF1KB0 GFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFYIRDGMSVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLD
              190       200       210       220       230       240

      230       240       250       260       270       280        
pF1KB0 QVTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVTDMMVANSHNLIVTVKPANQRNNVVRGASGRLTGPPSAGPGPAEPDSDDDSSDLVIEN
              250       260       270       280       290       300

      290       300       310       320       330       340     
pF1KB0 RQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
              310       320       330       340       350       

>>NP_115910 (OMIM: 608975) partitioning defective 6 homo  (372 aa)
 initn: 1007 init1: 1007 opt: 1085  Z-score: 882.6  bits: 171.9 E(85289): 2e-42
Smith-Waterman score: 1100; 57.7% identity (78.5% similar) in 317 aa overlap (1-302:1-308)

               10         20        30        40        50         
pF1KB0 MARPQRTPARSPD-SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLL
       : : .:  : :   . .:::::: ::::::.: :.. . :.::  ::. ::.::..:::.
NP_115 MNRSHRHGAGSGCLGTMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLV
               10        20        30        40        50        60

      60        70        80        90        100       110        
pF1KB0 GYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKRE-ADSSGLAFASNSLQRRKKGL--
       ::.: ::::::..:::. :.:.... : ::...::.: :: :  ::....: ..:. :  
NP_115 GYADIHGDLLPINNDDNYHKAVSTANPLLRIFIQKKEEADYS--AFGTDTLIKKKNVLTN
               70        80        90       100         110        

        120       130       140       150       160       170      
pF1KB0 LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGM
       .:::    : .: ..::.::::: :::.::::.::::::::::.:.:...::::::::: 
NP_115 VLRP-DNHRKKPHIVISMPQDFRPVSSIIDVDILPETHRRVRLYKYGTEKPLGFYIRDGS
      120        130       140       150       160       170       

        180       190       200       210       220       230      
pF1KB0 SVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVA
       ::::.:.:::.:::::::::: ::::.:::::::.::.::::::::.::.::::::::.:
NP_115 SVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA
       180       190       200       210       220       230       

        240       250            260        270            280     
pF1KB0 NSHNLIVTVKPANQRNNVVR-----GASGRLTGPPSAG-PGPAEP-----DSDDDSSDLV
       ::.:::.::.::::::::::     :.::. :     : :   ::     : :.. .:..
NP_115 NSRNLIITVRPANQRNNVVRNSRTSGSSGQSTDNSLLGYPQQIEPSFEPEDEDSEEDDII
       240       250       260       270       280       290       

         290       300       310       320       330       340     
pF1KB0 IENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRGDGSGFSL
       ::.      ::. :  :                                           
NP_115 IED------NGVPQQIPKAVPNTESLESLTQIELSFESGQNGFIPSNEVSLAAIASSSNT
       300             310       320       330       340       350 

>>NP_115899 (OMIM: 608976) partitioning defective 6 homo  (376 aa)
 initn: 756 init1: 756 opt: 1081  Z-score: 879.3  bits: 171.3 E(85289): 3.1e-42
Smith-Waterman score: 1107; 59.3% identity (77.2% similar) in 312 aa overlap (14-306:17-323)

                  10        20        30        40        50       
pF1KB0    MARPQRTPARSPDSIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDV
                       : ::::::: ::::::.: : . . :..: .:.  .:.: . ::
NP_115 MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYKLVVHTHHISNSDV
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KB0 LLGYTDAHGDLLPLTNDDSLHRALASGPPPLRLLVQKREADSSGLAFASNSLQRRKKGL-
        .::.:.::::::..:::.. .:..:. : ::...::::    : .....:: ::...: 
NP_115 TIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEAERG-SLGAGSLCRRRRALG
               70        80        90       100        110         

        120       130       140       150       160       170      
pF1KB0 LLRPVAPLRTRPPLLISLPQDFRQVSSVIDVDLLPETHRRVRLHKHGSDRPLGFYIRDGM
        ::  .: : :  : :.::.::: :::.:::::.::::::::::.:: ..::::::::: 
NP_115 ALRDEGP-RRRAHLDIGLPRDFRPVSSIIDVDLVPETHRRVRLHRHGCEKPLGFYIRDGA
     120        130       140       150       160       170        

        180       190       200       210       220       230      
pF1KB0 SVRVAPQGLERVPGIFISRLVRGGLAESTGLLAVSDEILEVNGIEVAGKTLDQVTDMMVA
       ::::.:.:::.::::::::.: ::::::::::::.::.::::::::::::::::::::.:
NP_115 SVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIA
      180       190       200       210       220       230        

        240       250       260          270                       
pF1KB0 NSHNLIVTVKPANQRNNVVRGASGRL---TGPPSAGP----GPAEP-----------DSD
       :::::::::::::::::::::  ::    .:::: :     ::  :           .::
NP_115 NSHNLIVTVKPANQRNNVVRG--GRALGSSGPPSDGTAGFVGPPAPRVLQNFHPDEAESD
      240       250         260       270       280       290      

      280       290       300       310       320       330        
pF1KB0 DDSSDLVIENRQPPSSNGLSQGPPCWDLHPGCRHPGTRSSLPSLDDQEQASSGWGSRIRG
       .:. :.:::.   :.    . : :  .:                                
NP_115 EDN-DVVIEGTLEPARPPQTPGAPAGSLSRVNGAGLAQRLQRDLALDGGLQRLLSSLRAD
         300       310       320       330       340       350     




345 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 17:15:36 2016 done: Sat Nov  5 17:15:37 2016
 Total Scan time:  9.400 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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