GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:09:32

Sequence gi568815591f:22627439_22831570 : 204132 bp : 41.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    593    588    6                               1.05
 1.04 Term -  19376  18948  429  2  0   68   35   349 0.306  21.92
 1.03 Intr -  27392  27249  144  2  0   72   59   123 0.067   7.36
 1.02 Intr -  35422  35334   89  2  2   47   95    70 0.071   2.37
 1.01 Init -  41847  41721  127  0  1   47   99   186 0.961  15.97
 1.00 Prom -  43422  43383   40                              -5.95

 2.00 Prom +  45332  45371   40                              -9.15
 2.01 Init +  45719  45810   92  1  2   70   81    72 0.293   4.71
 2.02 Intr +  45894  45943   50  0  2   46   77    36 0.228  -4.29
 2.03 Intr +  53306  53448  143  0  2   38   63   118 0.578   3.45
 2.04 Term +  57489  57635  147  2  0   54   41   193 0.819   8.12
 2.05 PlyA +  58305  58310    6                               1.05

 3.03 PlyA -  58344  58339    6                               1.05
 3.02 Term -  62992  62895   98  2  2   95   39    78 0.529   0.75
 3.01 Init -  67742  67538  205  2  1   69   62   166 0.792  11.16
 3.00 Prom -  68515  68476   40                              -8.15

 4.00 Prom +  69278  69317   40                              -8.25
 4.01 Init +  72820  72904   85  0  1   51   99    89 0.332   7.33
 4.02 Intr +  76261  76496  236  2  2   75   94    10 0.200  -3.22
 4.03 Intr +  76607  77003  397  1  1   83   90   118 0.463   4.73
 4.04 Term +  78067  78281  215  2  2   58   47   167 0.414   6.01
 4.05 PlyA +  81080  81085    6                               1.05

 5.00 Prom +  85904  85943   40                              -2.55
 5.01 Init +  86991  87085   95  2  2   34  100    89 0.154   4.60
 5.02 Intr +  98905  99230  326  1  2   29   27   204 0.454   2.89
 5.03 Intr + 100006 100196  191  2  2   93   90   216 0.707  20.68
 5.04 Intr + 101255 101368  114  1  0   85   66   105 0.896   7.72
 5.05 Intr + 102076 102222  147  0  0  102   98   112 0.932  13.11
 5.06 Term + 103968 104135  168  2  0   94   39   201 0.998  12.70
 5.07 PlyA + 104458 104463    6                               1.05

 6.00 Prom + 106395 106434   40                              -6.55
 6.01 Sngl + 113739 114143  405  2  0   91   38   147 0.746   6.03
 6.02 PlyA + 114469 114474    6                               1.05

 7.03 PlyA - 114514 114509    6                               1.05
 7.02 Term - 139383 139254  130  2  1  -23   37   186 0.074  -0.93
 7.01 Init - 146555 146212  344  2  2   75   75   362 0.148  30.35
 7.00 Prom - 161724 161685   40                              -5.25

 8.03 PlyA - 162127 162122    6                               1.05
 8.02 Term - 168625 168177  449  2  2  -17   47   260 0.481   5.79
 8.01 Init - 169109 169010  100  2  1  100  113    49 0.404   9.08
 8.00 Prom - 178211 178172   40                              -4.55

 9.02 PlyA - 183471 183466    6                               1.05
 9.01 Sngl - 195341 195117  225  2  0  104   54   213 0.300  14.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 146555 146208  348  2  0   75   49   365 0.841  27.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_1|262_aa
MGLKDANVLWSLRAGGGEDGSFVRCGPHQLHSPFGPLMTAVAAHWVGFTIAILQVKTVKL
GEVKELPPDHIPAWTPSSQALLTDLGYCCLVQGQTPDKSFPVLGTWSCDCERRFFSIVLA
SPCHWGTPQSFLGPISAAALNTHTPEPSAAATACRPYQTWHQEGSPRLGLLSLEEKELTG
RSQKSLPPRIPTAFAAAAITSDICSLGCLGLLELSPVLTSMIELHEEYTTAHSLKPELLY
PTQLAFPHLPGGESISPTEANL

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_1|789_bp
atgggcttaaaagacgccaatgttctatggtccctgagagctggtggaggtgaagatgga
agctttgtgcgctgtgggccccatcaactccactcgccttttgggcccttaatgacagct
gttgcagcacattgggtaggctttactattgccattttacaagtgaaaacagtgaagctt
ggagaagttaaggaacttcccccagatcacattcctgcatggactcctagcagtcaggca
ttgctgacagatcttggttactgctgcttggtgcagggacagacacctgacaaatcattt
cctgtattgggaacttggagttgtgactgtgagagacggttcttctccatagtcttggct
agcccatgccactggggaacaccccagagttttctggggcccatctctgctgctgctctg
aatactcataccccagaacccagtgctgctgcaactgcctgcaggccataccagacctgg
caccaagaaggatcccctcggttaggacttctttccctagaggaaaaagagctaacaggg
agatcccagaagtctttgccgccaaggatcccaacagcctttgctgctgctgccataact
tcagatatctgtagccttggctgtctaggactcctagagttgtccccagtgctgacctca
atgatagagctgcatgaagagtacaccacagcacactctctgaaaccagagctgctgtac
cccacccaactggcgttcccacaccttcctggaggtgaaagtatttcccccactgaggct
aatctgtaa

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_2|143_aa
MAGLFFEGILPDRRSIGTAVDLRTVTQTIKWRLERFLSEESDQSMKKGVFQKHTQIPGKT
IPTLLTVFLTNTLAPVPEAPAPPVVIAPPINQKEKGVIQKASSSPSSPSSSSHLLSCTEC
SSKFPSDPDENENLHMPREEAEA

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_2|432_bp
atggcaggtttattctttgaaggaatccttcctgaccggaggtcaattggcacagcggtt
gatttgagaacagtaacacaaaccataaaatggagattagaaaggtttctttctgaggaa
tctgaccagtccatgaaaaaaggagtcttccaaaaacacacccaaattcctggaaaaacc
atccccaccctattaacagtcttcctcactaacaccctggccccagtacctgaagcccca
gccccgccagttgtcatagctccaccaattaatcagaaagagaagggtgtgattcaaaaa
gcatcatcatcaccatcatcaccatcatcatcatcacacctgctttcctgcacagaatgt
tcctcaaagtttccaagtgacccagatgaaaacgagaacctgcacatgcccagagaggaa
gcagaagcttaa

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_3|100_aa
MEYRKQKIHRCGEGKGNLLESGEGRSQDDDYTLIEEGSQYRLEHRDSGGGLSTVIAKSSA
IILVFLKTAVFRSSSCFQDRVWAVEDIPGRLRMHAGVSSP

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_3|303_bp
atggaatacagaaagcagaagatccatcgctgtggagaagggaaagggaatctcctggag
agtggtgaagggagatcccaggatgacgattacacattaattgaagagggcagtcagtac
agattggaacatcgtgactcaggaggtggcttgagtactgtcattgccaaatcttctgcc
attatacttgtctttttaaaaactgcagtcttcaggagcagcagctgcttccaagacagg
gtttgggcagttgaagatattcctggtcggctgaggatgcatgcaggtgttagcagtcct
tag

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_4|310_aa
MESMTARFLLGLKEEDSSAGKSWEGGQAGEINSLVAHTKPVWWSLHTDAHEIWCHDSNRG
TSLGGWGISLGRSIPCPPALCSMKKIHLRPWVLRPTSPRNISLILNWFLSFSGRDRRRIL
SVDPKLWCLSRTREDSLPLMFITRGRLPDYSPTFQRCPTTQGRLPWSFTLSSKYRFSGGQ
EPPNPFSFTLSGKCRFSRGQEPPDPLFPRPDPLSPHPDPLSLCPNPLFPHPDPFPTFLEG
ACYKCWKSGHCAKECPQPRIPPKPCPICAGPPRKSDCSTHLAATSRAPGTLAQGSLTDSF
PDLLGLAAED

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_4|933_bp
atggaatccatgactgccaggtttttactggggcttaaggaggaagacagtagcgctggc
aaaagctgggaaggaggacaggcaggtgaaataaacagccttgttgctcacacaaagcct
gtttggtggtctcttcacacggacgcacatgaaatttggtgccatgactcgaatcggggg
acctccttgggaggttgggggatctcccttgggagatcaatcccctgtcctcctgctctt
tgctccatgaaaaagatccacctacgaccttgggtcctcagacccaccagcccaaggaac
atctcactaattttaaattggttcctttccttttctggtagagacaggagacgcatttta
tctgtggacccaaaactctggtgcctgtcacggactcgggaagacagtcttcccttgatg
tttatcacgcgaggacgcctgcctgattattcacccacgtttcagaggtgtccaaccacg
cagggacgactgccttggtccttcacccttagcagcaagtaccgcttttctggggggcaa
gaaccccccaaccccttctccttcaccctgagtggcaagtgccgcttttctagggggcaa
gaaccccccgatcccttatttccacgccctgaccccttatctccacaccctgacccctta
tctctgtgccccaaccctttatttccacaccccgacccctttcccacttttctggaggga
gcttgctacaagtgctggaaatctggccactgcgccaaggaatgcccacagcccaggatt
cctcctaagccgtgtcccatctgtgcgggacccccaagaaaatcggactgttcaactcac
ctggcagccacttccagagcccctggaactctggcccaaggctctctgactgactccttc
ccagatcttctcggcttagcagctgaagactga

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_5|346_aa
MQVDQPLGCPECKRELRVGDINLAVICVKEKRCPSETVVKRLSGNGESTGSTRQTSGTES
KVLTGRIPKGSLGRGQGSSQPPLSGLKQVKKVAEATRWQKGVTHSTWRRLEVTARNLRMA
RQFYNSRSQGEPEHRRTQMTGAFGPVAFSLGLLLVLPAAFPAPVPPGEDSKDVAAPHRQP
LTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGF
NEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITT
PDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_5|1041_bp
atgcaagtggatcagccactgggctgtccagaatgcaagagagaactcagagttggggac
ataaacttggcagtcatctgtgtaaaagagaaaaggtgccccagtgaaacagtggtgaag
agactcagtggcaatggggagagcactggcagcacaaggcaaacctctggcacagagagc
aaagtcctcactgggaggattcccaaggggtcacttgggagagggcagggcagcagccaa
cctcctctaagtgggctgaagcaggtgaagaaagtggcagaagccacgcggtggcaaaaa
ggagtcacacactccacctggagacgccttgaagtaactgcacgaaatttgaggatggcc
aggcagttctacaacagccgctcacagggagagccagaacacagaagaactcagatgact
ggcgccttcggtccagttgccttctccctggggctgctcctggtgttgcctgctgccttc
cctgccccagtacccccaggagaagattccaaagatgtagccgccccacacagacagcca
ctcacctcttcagaacgaattgacaaacaaattcggtacatcctcgacggcatctcagcc
ctgagaaaggagacatgtaacaagagtaacatgtgtgaaagcagcaaagaggcactggca
gaaaacaacctgaaccttccaaagatggctgaaaaagatggatgcttccaatctggattc
aatgaggagacttgcctggtgaaaatcatcactggtcttttggagtttgaggtataccta
gagtacctccagaacagatttgagagtagtgaggaacaagccagagctgtgcagatgagt
acaaaagtcctgatccagttcctgcagaaaaaggcaaagaatctagatgcaataaccacc
cctgacccaaccacaaatgccagcctgctgacgaagctgcaggcacagaaccagtggctg
caggacatgacaactcatctcattctgcgcagctttaaggagttcctgcagtccagcctg
agggctcttcggcaaatgtag

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_6|134_aa
MDKWDHVKLKSFRVAKDTINKVKRQPTEWEKISANYPSDKELVIRIYKELKQPCRKKKSN
KSIKIWAKDLNRHFSKEGIQMANRYMKRCSTSLIIREIVSPQSKLLICKRQTITNAGENV
EKRELLYAVGGNVN

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_6|405_bp
atggacaaatgggatcacgtcaagttaaaaagcttccgcgtggcaaaggatacaatcaac
aaagtgaagagacaacccacagaatgggagaaaatatctgccaactacccatctgacaag
gaattagtaataagaatatacaaggagctcaaacaaccctgtaggaaaaaaaaatctaat
aaatcgatcaaaatatgggcaaaagatttgaatagacatttctcaaaagaaggcatacaa
atggcaaacaggtatatgaaaaggtgctcaacatcactgatcatcagagaaattgtctca
ccccagtcaaaactgcttatatgcaaaagacagacaataacaaatgctggcgagaatgta
gagaaaagggaactgttgtatgctgttggtgggaatgtaaattag

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_7|157_aa
MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD
AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAGAAARPPPKPITLTTP
NADKDVKQQELSFIVGGNAKFGGQLVISYKTKHTFTI

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_7|474_bp
atgacaaagaaaagaaggaacaacgttcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaggacaacgccattaagaaattcgtc
attcgaaacatagtggaggctgcagcagtcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtgtgtgaagctacattactgtgtgagttgtgtaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccgcacgtcccccaccaaagcccataacactgacaacacca
aatgctgacaaggatgtgaagcaacaagaactctccttcattgttggtggaaatgcaaaa
tttggaggacagttggtgatttcttacaaaactaaacatacttttaccatatga

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_8|182_aa
MAERGQHRAQAMVSEGGSLKRWQLSCDVVPVSAQDLRECLDAQAEVCCRDGFLIWTASAR
AVQKGNVGWDPPHRVPTGAPPSRAVRRRPPSSRPQNDRSTGSLYHMPGKATDAQCQSMKA
AGREAVSCKATEAELPETMGTYLLHQRDPDVRHGVKGDHFGPLRFDCPAGFRTCVGPVAP
LF

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_8|549_bp
atggctgaaaggggccaacatagagctcaggccatggtttcagagggtggaagcctcaag
cgttggcagctttcatgtgatgttgtgcctgtgagtgcacaagatctacgggaatgcctg
gatgcccaggcagaagtttgttgtagggatgggttcctcatatggacagcctctgctagg
gcagtgcagaagggaaatgtggggtgggatcccccacacagagtccctactggggcacca
cctagtcgggctgtgagaagaaggccaccatcctccagaccccagaatgatagatccact
ggcagcttgtaccacatgcctggaaaagccacagatgctcaatgccagtccatgaaagca
gctgggagggaggctgtatcctgcaaagccacagaggcagagctacccgagaccatggga
acctacctcttgcatcagcgtgacccggatgtgagacatggagtcaaaggagatcatttt
ggacctttaagatttgactgccctgctggatttcggacttgtgtggggcctgtagcccct
ttgttttga

>gi568815591f:22627439_22831570|GENSCAN_predicted_peptide_9|74_aa
MVKLSKEAKQRLQQLFKGSQFAIRWGFIPLVIYLGQWEKNRESDWREEGGGDSSPIFGRR
GRERKIGDTAVHGP

>gi568815591f:22627439_22831570|GENSCAN_predicted_CDS_9|225_bp
atggtgaagctgagcaaagaggccaagcagagactacagcagctcttcaaggggagccag
tttgccattcgctggggctttatccctcttgtgatttacctgggtcagtgggagaagaac
cgggaaagtgactggagggaagagggtggcggagacagcagccccatttttggccgtcgg
gggagggagagaaaaataggggacactgccgtgcacggcccctga