Result of FASTA (omim) for pF1KB6437
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6437, 313 aa
  1>>>pF1KB6437 313 - 313 aa - 313 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1726+/-0.000563; mu= 12.1284+/- 0.034
 mean_var=182.1616+/-41.220, 0's: 0 Z-trim(112.2): 667  B-trim: 1211 in 2/52
 Lambda= 0.095027
 statistics sampled from 20115 (21009) to 20115 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.622), E-opt: 0.2 (0.246), width:  16
 Scan time:  7.120

The best scores are:                                      opt bits E(85289)
NP_075526 (OMIM: 605787) ankyrin repeat family A p ( 313) 2056 294.8 1.5e-79
XP_005248617 (OMIM: 605787) PREDICTED: ankyrin rep ( 245) 1427 208.4 1.2e-53
XP_016865167 (OMIM: 605787) PREDICTED: ankyrin rep ( 152) 1003 150.0 2.9e-36
XP_016882904 (OMIM: 209920,603200) PREDICTED: DNA- ( 260)  795 121.8 1.5e-27
NP_003712 (OMIM: 209920,603200) DNA-binding protei ( 260)  795 121.8 1.5e-27
XP_005260192 (OMIM: 209920,603200) PREDICTED: DNA- ( 260)  795 121.8 1.5e-27
XP_005260191 (OMIM: 209920,603200) PREDICTED: DNA- ( 260)  795 121.8 1.5e-27
XP_005260193 (OMIM: 209920,603200) PREDICTED: DNA- ( 259)  791 121.2 2.2e-27
XP_005260194 (OMIM: 209920,603200) PREDICTED: DNA- ( 259)  791 121.2 2.2e-27
XP_006722993 (OMIM: 209920,603200) PREDICTED: DNA- ( 259)  791 121.2 2.2e-27
XP_016882905 (OMIM: 209920,603200) PREDICTED: DNA- ( 238)  650 101.9 1.4e-21
NP_001265656 (OMIM: 209920,603200) DNA-binding pro ( 238)  650 101.9 1.4e-21
NP_604389 (OMIM: 209920,603200) DNA-binding protei ( 237)  642 100.8   3e-21
NP_001265657 (OMIM: 209920,603200) DNA-binding pro ( 237)  642 100.8   3e-21
NP_065789 (OMIM: 615759) kinase D-interacting subs (1771)  293 54.1 2.4e-06
XP_016872415 (OMIM: 611640) PREDICTED: fibronectin ( 197)  253 47.3   3e-05
XP_005270337 (OMIM: 611640) PREDICTED: fibronectin ( 197)  253 47.3   3e-05
XP_011538664 (OMIM: 611640) PREDICTED: fibronectin ( 197)  253 47.3   3e-05
XP_011538663 (OMIM: 611640) PREDICTED: fibronectin ( 254)  253 47.5 3.5e-05
XP_011538662 (OMIM: 611640) PREDICTED: fibronectin ( 254)  253 47.5 3.5e-05
XP_016872413 (OMIM: 611640) PREDICTED: fibronectin ( 254)  253 47.5 3.5e-05
NP_001139381 (OMIM: 611397) protein TANC1 isoform  (1390)  263 49.9 3.6e-05
XP_011510364 (OMIM: 611397) PREDICTED: protein TAN (1554)  263 49.9 3.9e-05
NP_002805 (OMIM: 300880) 26S proteasome non-ATPase ( 226)  251 47.1 3.9e-05
XP_016872411 (OMIM: 611640) PREDICTED: fibronectin ( 313)  253 47.6 3.9e-05
NP_001014794 (OMIM: 602366) integrin-linked protei ( 452)  255 48.1   4e-05
XP_005252961 (OMIM: 602366) PREDICTED: integrin-li ( 452)  255 48.1   4e-05
NP_004508 (OMIM: 602366) integrin-linked protein k ( 452)  255 48.1   4e-05
XP_011518367 (OMIM: 602366) PREDICTED: integrin-li ( 452)  255 48.1   4e-05
NP_001014795 (OMIM: 602366) integrin-linked protei ( 452)  255 48.1   4e-05
XP_016860646 (OMIM: 611397) PREDICTED: protein TAN (1660)  263 50.0   4e-05
XP_006712877 (OMIM: 611397) PREDICTED: protein TAN (1677)  263 50.0 4.1e-05
XP_016860645 (OMIM: 611397) PREDICTED: protein TAN (1685)  263 50.0 4.1e-05
XP_011510361 (OMIM: 611397) PREDICTED: protein TAN (1697)  263 50.0 4.1e-05
XP_016872410 (OMIM: 611640) PREDICTED: fibronectin ( 339)  253 47.6 4.1e-05
XP_016860644 (OMIM: 611397) PREDICTED: protein TAN (1738)  263 50.0 4.2e-05
NP_660278 (OMIM: 611640) fibronectin type 3 and an ( 345)  253 47.7 4.2e-05
XP_006718127 (OMIM: 611640) PREDICTED: fibronectin ( 345)  253 47.7 4.2e-05
XP_011510360 (OMIM: 611397) PREDICTED: protein TAN (1755)  263 50.0 4.2e-05
XP_016860642 (OMIM: 611397) PREDICTED: protein TAN (1773)  263 50.0 4.2e-05
XP_016860643 (OMIM: 611397) PREDICTED: protein TAN (1773)  263 50.0 4.2e-05
XP_016860641 (OMIM: 611397) PREDICTED: protein TAN (1790)  263 50.0 4.2e-05
XP_016860640 (OMIM: 611397) PREDICTED: protein TAN (1791)  263 50.0 4.2e-05
XP_011538658 (OMIM: 611640) PREDICTED: fibronectin ( 355)  253 47.7 4.2e-05
XP_016872409 (OMIM: 611640) PREDICTED: fibronectin ( 359)  253 47.7 4.3e-05
XP_006718121 (OMIM: 611640) PREDICTED: fibronectin ( 361)  253 47.7 4.3e-05
XP_006712875 (OMIM: 611397) PREDICTED: protein TAN (1826)  263 50.0 4.3e-05
XP_016860639 (OMIM: 611397) PREDICTED: protein TAN (1838)  263 50.0 4.3e-05
XP_016860638 (OMIM: 611397) PREDICTED: protein TAN (1844)  263 50.0 4.3e-05
XP_016872406 (OMIM: 611640) PREDICTED: fibronectin ( 365)  253 47.7 4.3e-05


>>NP_075526 (OMIM: 605787) ankyrin repeat family A prote  (313 aa)
 initn: 2056 init1: 2056 opt: 2056  Z-score: 1549.0  bits: 294.8 E(85289): 1.5e-79
Smith-Waterman score: 2056; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)

               10        20        30        40        50        60
pF1KB6 MDTSTNLDIGAQLIVEECPSTYSLTGMPDIKIEHPLDPNSEEGSAQGVAMGMKFILPNRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_075 MDTSTNLDIGAQLIVEECPSTYSLTGMPDIKIEHPLDPNSEEGSAQGVAMGMKFILPNRF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 DMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_075 DMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 KHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_075 KHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_075 EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_075 VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI
              250       260       270       280       290       300

              310   
pF1KB6 ESHLLKLLQNIKE
       :::::::::::::
NP_075 ESHLLKLLQNIKE
              310   

>>XP_005248617 (OMIM: 605787) PREDICTED: ankyrin repeat   (245 aa)
 initn: 1427 init1: 1427 opt: 1427  Z-score: 1084.1  bits: 208.4 E(85289): 1.2e-53
Smith-Waterman score: 1427; 100.0% identity (100.0% similar) in 217 aa overlap (97-313:29-245)

         70        80        90       100       110       120      
pF1KB6 RFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPI
                                     ::::::::::::::::::::::::::::::
XP_005   MKKIVKIFKIRLTLTWRWHLSYLKVESYAECNIHTSPSPGIQVRHVYTPSTTKHFSPI
                 10        20        30        40        50        

        130       140       150       160       170       180      
pF1KB6 KQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPL
       60        70        80        90       100       110        

        190       200       210       220       230       240      
pF1KB6 MWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW
      120       130       140       150       160       170        

        250       260       270       280       290       300      
pF1KB6 NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK
      180       190       200       210       220       230        

        310   
pF1KB6 LLQNIKE
       :::::::
XP_005 LLQNIKE
      240     

>>XP_016865167 (OMIM: 605787) PREDICTED: ankyrin repeat   (152 aa)
 initn: 1003 init1: 1003 opt: 1003  Z-score: 772.1  bits: 150.0 E(85289): 2.9e-36
Smith-Waterman score: 1003; 100.0% identity (100.0% similar) in 152 aa overlap (162-313:1-152)

             140       150       160       170       180       190 
pF1KB6 LTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAA
                                     ::::::::::::::::::::::::::::::
XP_016                               MLYLATRIEQENVINHTDEEGFTPLMWAAA
                                             10        20        30

             200       210       220       230       240       250 
pF1KB6 HGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP
               40        50        60        70        80        90

             260       270       280       290       300       310 
pF1KB6 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNI
              100       110       120       130       140       150

         
pF1KB6 KE
       ::
XP_016 KE
         

>>XP_016882904 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 872 init1: 613 opt: 795  Z-score: 615.5  bits: 121.8 E(85289): 1.5e-27
Smith-Waterman score: 795; 58.6% identity (78.9% similar) in 227 aa overlap (86-310:35-252)

          60        70        80        90       100        110    
pF1KB6 LPNRFDMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIH-TSPSPGIQVRHV
                                     ::  : : ::   :. . ..: :  .:   
XP_016 QPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLS-LFP--CTPEPVNPEPDASV---
           10        20        30        40           50           

          120       130       140       150       160       170    
pF1KB6 YTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQ-EN
          :. .  : .:.::::::..::::::. :   .:::.::::::::.  :  .... .:
XP_016 ---SSPQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDN
          60        70        80        90       100       110     

           180       190       200       210       220       230   
pF1KB6 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM
       ..:. ::.:::::.::.: :.: .:.:::. ::::..:.: :::::::: . :::::: .
XP_016 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGL
         120       130       140       150       160       170     

           240       250       260       270       280       290   
pF1KB6 LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY
       ::.  ::.: :::::::::::::.:::::::. ::  ::: : :.::::. :::::::::
XP_016 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY
         180       190       200       210       220       230     

           300       310        
pF1KB6 RSVQQVIESHLLKLLQNIKE     
       :.::::::.:.:::.:.        
XP_016 RKVQQVIENHILKLFQSNLVPADPE
         240       250       260

>>NP_003712 (OMIM: 209920,603200) DNA-binding protein RF  (260 aa)
 initn: 872 init1: 613 opt: 795  Z-score: 615.5  bits: 121.8 E(85289): 1.5e-27
Smith-Waterman score: 795; 58.6% identity (78.9% similar) in 227 aa overlap (86-310:35-252)

          60        70        80        90       100        110    
pF1KB6 LPNRFDMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIH-TSPSPGIQVRHV
                                     ::  : : ::   :. . ..: :  .:   
NP_003 QPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLS-LFP--CTPEPVNPEPDASV---
           10        20        30        40           50           

          120       130       140       150       160       170    
pF1KB6 YTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQ-EN
          :. .  : .:.::::::..::::::. :   .:::.::::::::.  :  .... .:
NP_003 ---SSPQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDN
          60        70        80        90       100       110     

           180       190       200       210       220       230   
pF1KB6 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM
       ..:. ::.:::::.::.: :.: .:.:::. ::::..:.: :::::::: . :::::: .
NP_003 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGL
         120       130       140       150       160       170     

           240       250       260       270       280       290   
pF1KB6 LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY
       ::.  ::.: :::::::::::::.:::::::. ::  ::: : :.::::. :::::::::
NP_003 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY
         180       190       200       210       220       230     

           300       310        
pF1KB6 RSVQQVIESHLLKLLQNIKE     
       :.::::::.:.:::.:.        
NP_003 RKVQQVIENHILKLFQSNLVPADPE
         240       250       260

>>XP_005260192 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 872 init1: 613 opt: 795  Z-score: 615.5  bits: 121.8 E(85289): 1.5e-27
Smith-Waterman score: 795; 58.6% identity (78.9% similar) in 227 aa overlap (86-310:35-252)

          60        70        80        90       100        110    
pF1KB6 LPNRFDMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIH-TSPSPGIQVRHV
                                     ::  : : ::   :. . ..: :  .:   
XP_005 QPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLS-LFP--CTPEPVNPEPDASV---
           10        20        30        40           50           

          120       130       140       150       160       170    
pF1KB6 YTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQ-EN
          :. .  : .:.::::::..::::::. :   .:::.::::::::.  :  .... .:
XP_005 ---SSPQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDN
          60        70        80        90       100       110     

           180       190       200       210       220       230   
pF1KB6 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM
       ..:. ::.:::::.::.: :.: .:.:::. ::::..:.: :::::::: . :::::: .
XP_005 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGL
         120       130       140       150       160       170     

           240       250       260       270       280       290   
pF1KB6 LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY
       ::.  ::.: :::::::::::::.:::::::. ::  ::: : :.::::. :::::::::
XP_005 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY
         180       190       200       210       220       230     

           300       310        
pF1KB6 RSVQQVIESHLLKLLQNIKE     
       :.::::::.:.:::.:.        
XP_005 RKVQQVIENHILKLFQSNLVPADPE
         240       250       260

>>XP_005260191 (OMIM: 209920,603200) PREDICTED: DNA-bind  (260 aa)
 initn: 872 init1: 613 opt: 795  Z-score: 615.5  bits: 121.8 E(85289): 1.5e-27
Smith-Waterman score: 795; 58.6% identity (78.9% similar) in 227 aa overlap (86-310:35-252)

          60        70        80        90       100        110    
pF1KB6 LPNRFDMNVCSRFVKSLNEEDSKNIQDQVNSDLEVASVLFKAECNIH-TSPSPGIQVRHV
                                     ::  : : ::   :. . ..: :  .:   
XP_005 QPAEDLIQTQQTPASELGDPEDPGEEAADGSDTVVLS-LFP--CTPEPVNPEPDASV---
           10        20        30        40           50           

          120       130       140       150       160       170    
pF1KB6 YTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSVHQLAAQGEMLYLATRIEQ-EN
          :. .  : .:.::::::..::::::. :   .:::.::::::::.  :  .... .:
XP_005 ---SSPQAGSSLKHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELDQLKEHLRKGDN
          60        70        80        90       100       110     

           180       190       200       210       220       230   
pF1KB6 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKM
       ..:. ::.:::::.::.: :.: .:.:::. ::::..:.: :::::::: . :::::: .
XP_005 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGL
         120       130       140       150       160       170     

           240       250       260       270       280       290   
pF1KB6 LLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGY
       ::.  ::.: :::::::::::::.:::::::. ::  ::: : :.::::. :::::::::
XP_005 LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY
         180       190       200       210       220       230     

           300       310        
pF1KB6 RSVQQVIESHLLKLLQNIKE     
       :.::::::.:.:::.:.        
XP_005 RKVQQVIENHILKLFQSNLVPADPE
         240       250       260

>>XP_005260193 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 872 init1: 613 opt: 791  Z-score: 612.6  bits: 121.2 E(85289): 2.2e-27
Smith-Waterman score: 791; 64.9% identity (85.6% similar) in 188 aa overlap (124-310:64-251)

           100       110       120       130       140       150   
pF1KB6 LFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSV
                                     : .:.::::::..::::::. :   .:::.
XP_005 GSDTVVLSLFPCTPEPVNPEPDASVSSPQGSSLKHSTTLTNRQRGNEVSALPATLDSLSI
            40        50        60        70        80        90   

           160       170        180       190       200       210  
pF1KB6 HQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG
       ::::::::.  :  .... .:..:. ::.:::::.::.: :.: .:.:::. ::::..:.
XP_005 HQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA
           100       110       120       130       140       150   

            220       230       240       250       260       270  
pF1KB6 KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA
       : :::::::: . :::::: .::.  ::.: :::::::::::::.:::::::. ::  ::
XP_005 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA
           160       170       180       190       200       210   

            280       290       300       310        
pF1KB6 DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE     
       : : :.::::. ::::::::::.::::::.:.:::.:.        
XP_005 DLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADPE
           220       230       240       250         

>>XP_005260194 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 872 init1: 613 opt: 791  Z-score: 612.6  bits: 121.2 E(85289): 2.2e-27
Smith-Waterman score: 791; 64.9% identity (85.6% similar) in 188 aa overlap (124-310:64-251)

           100       110       120       130       140       150   
pF1KB6 LFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSV
                                     : .:.::::::..::::::. :   .:::.
XP_005 GSDTVVLSLFPCTPEPVNPEPDASVSSPQGSSLKHSTTLTNRQRGNEVSALPATLDSLSI
            40        50        60        70        80        90   

           160       170        180       190       200       210  
pF1KB6 HQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG
       ::::::::.  :  .... .:..:. ::.:::::.::.: :.: .:.:::. ::::..:.
XP_005 HQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA
           100       110       120       130       140       150   

            220       230       240       250       260       270  
pF1KB6 KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA
       : :::::::: . :::::: .::.  ::.: :::::::::::::.:::::::. ::  ::
XP_005 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA
           160       170       180       190       200       210   

            280       290       300       310        
pF1KB6 DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE     
       : : :.::::. ::::::::::.::::::.:.:::.:.        
XP_005 DLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADPE
           220       230       240       250         

>>XP_006722993 (OMIM: 209920,603200) PREDICTED: DNA-bind  (259 aa)
 initn: 872 init1: 613 opt: 791  Z-score: 612.6  bits: 121.2 E(85289): 2.2e-27
Smith-Waterman score: 791; 64.9% identity (85.6% similar) in 188 aa overlap (124-310:64-251)

           100       110       120       130       140       150   
pF1KB6 LFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNEVSTTPLLANSLSV
                                     : .:.::::::..::::::. :   .:::.
XP_006 GSDTVVLSLFPCTPEPVNPEPDASVSSPQGSSLKHSTTLTNRQRGNEVSALPATLDSLSI
            40        50        60        70        80        90   

           160       170        180       190       200       210  
pF1KB6 HQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG
       ::::::::.  :  .... .:..:. ::.:::::.::.: :.: .:.:::. ::::..:.
XP_006 HQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILA
           100       110       120       130       140       150   

            220       230       240       250       260       270  
pF1KB6 KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA
       : :::::::: . :::::: .::.  ::.: :::::::::::::.:::::::. ::  ::
XP_006 KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGA
           160       170       180       190       200       210   

            280       290       300       310        
pF1KB6 DPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE     
       : : :.::::. ::::::::::.::::::.:.:::.:.        
XP_006 DLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADPE
           220       230       240       250         




313 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 08:16:27 2016 done: Sat Nov  5 08:16:28 2016
 Total Scan time:  7.120 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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