Result of FASTA (ccds) for pF1KB6844
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6844, 192 aa
  1>>>pF1KB6844 192 - 192 aa - 192 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.3871+/-0.000683; mu= 18.2253+/- 0.042
 mean_var=67.0430+/-13.341, 0's: 0 Z-trim(111.3): 178  B-trim: 403 in 1/51
 Lambda= 0.156638
 statistics sampled from 12069 (12278) to 12069 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.377), width:  16
 Scan time:  2.080

The best scores are:                                      opt bits E(32554)
CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17          ( 192) 1314 305.0 1.8e-83
CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7            ( 192) 1232 286.5 6.9e-78
CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22          ( 192) 1185 275.9 1.1e-74
CCDS222.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  946 221.9   2e-58
CCDS221.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  929 218.0 2.8e-57
CCDS7748.1 RHOG gene_id:391|Hs108|chr11            ( 191)  922 216.4 8.4e-57
CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2          ( 205)  829 195.4 1.9e-50
CCDS9757.1 RHOJ gene_id:57381|Hs108|chr14          ( 214)  786 185.7 1.6e-47
CCDS5349.1 RAC1 gene_id:5879|Hs108|chr7            ( 211)  729 172.9 1.2e-43
CCDS2795.1 RHOA gene_id:387|Hs108|chr3             ( 193)  704 167.2 5.7e-42
CCDS1575.1 RHOU gene_id:58480|Hs108|chr1           ( 258)  703 167.1 8.2e-42
CCDS854.1 RHOC gene_id:389|Hs108|chr1              ( 193)  695 165.1 2.3e-41
CCDS10068.1 RHOV gene_id:171177|Hs108|chr15        ( 236)  695 165.2 2.7e-41
CCDS1699.1 RHOB gene_id:388|Hs108|chr2             ( 196)  687 163.3 8.3e-41
CCDS8155.1 RHOD gene_id:29984|Hs108|chr11          ( 210)  664 158.2 3.2e-39
CCDS9222.1 RHOF gene_id:54509|Hs108|chr12          ( 211)  612 146.4 1.1e-35
CCDS82775.1 RHOA gene_id:387|Hs108|chr3            ( 187)  590 141.4 3.2e-34
CCDS2190.1 RND3 gene_id:390|Hs108|chr2             ( 244)  555 133.6 9.2e-32
CCDS11452.1 RND2 gene_id:8153|Hs108|chr17          ( 227)  553 133.1 1.2e-31
CCDS3458.1 RHOH gene_id:399|Hs108|chr4             ( 191)  517 124.9   3e-29
CCDS8771.1 RND1 gene_id:27289|Hs108|chr12          ( 232)  492 119.3 1.7e-27
CCDS7261.1 RHOBTB1 gene_id:9886|Hs108|chr10        ( 696)  365 91.1 1.6e-18
CCDS6034.1 RHOBTB2 gene_id:23221|Hs108|chr8        ( 727)  365 91.2 1.6e-18
CCDS55211.1 RHOBTB2 gene_id:23221|Hs108|chr8       ( 734)  365 91.2 1.7e-18
CCDS55210.1 RHOBTB2 gene_id:23221|Hs108|chr8       ( 749)  365 91.2 1.7e-18
CCDS73330.1 RHOD gene_id:29984|Hs108|chr11         ( 144)  283 71.9   2e-13
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16        ( 256)  281 71.7 4.1e-13
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16        ( 190)  271 69.3 1.6e-12
CCDS7698.1 HRAS gene_id:3265|Hs108|chr11           ( 189)  262 67.3 6.6e-12
CCDS9485.1 RAP2A gene_id:5911|Hs108|chr13          ( 183)  261 67.0 7.5e-12
CCDS14632.1 RAP2C gene_id:57826|Hs108|chrX         ( 183)  261 67.0 7.5e-12
CCDS3170.1 RAP2B gene_id:5912|Hs108|chr3           ( 183)  259 66.6   1e-11
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX         ( 201)  259 66.6 1.1e-11
CCDS1123.1 RIT1 gene_id:6016|Hs108|chr1            ( 219)  258 66.4 1.4e-11
CCDS58037.1 RIT1 gene_id:6016|Hs108|chr1           ( 236)  258 66.5 1.4e-11
CCDS7699.1 HRAS gene_id:3265|Hs108|chr11           ( 170)  256 65.9 1.6e-11
CCDS8703.1 KRAS gene_id:3845|Hs108|chr12           ( 189)  256 65.9 1.7e-11
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12        ( 201)  255 65.7 2.1e-11
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17       ( 196)  254 65.5 2.4e-11
CCDS7814.1 RRAS2 gene_id:22800|Hs108|chr11         ( 204)  254 65.5 2.4e-11
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17       ( 223)  254 65.5 2.6e-11
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17       ( 228)  254 65.6 2.6e-11
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15        ( 207)  253 65.3 2.9e-11
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19         ( 207)  252 65.1 3.4e-11
CCDS8702.1 KRAS gene_id:3845|Hs108|chr12           ( 188)  251 64.8 3.7e-11
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6          ( 237)  252 65.1 3.7e-11
CCDS62431.1 RIT2 gene_id:6014|Hs108|chr18          ( 153)  247 63.8   6e-11
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17       ( 216)  248 64.2 6.5e-11
CCDS11921.1 RIT2 gene_id:6014|Hs108|chr18          ( 217)  247 64.0 7.6e-11
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2          ( 200)  246 63.7 8.4e-11


>>CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17               (192 aa)
 initn: 1314 init1: 1314 opt: 1314  Z-score: 1612.0  bits: 305.0 E(32554): 1.8e-83
Smith-Waterman score: 1314; 100.0% identity (100.0% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
       ::::::::::::
CCDS11 PVKKPGKKCTVF
              190  

>>CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7                 (192 aa)
 initn: 1268 init1: 1232 opt: 1232  Z-score: 1511.8  bits: 286.5 E(32554): 6.9e-78
Smith-Waterman score: 1232; 92.7% identity (98.4% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       ::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::::
CCDS53 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :::::::.:..:::.:::::::::::.:::.:::::::::::::::::::::::::::::
CCDS53 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
       ::::  .:: ..
CCDS53 PVKKRKRKCLLL
              190  

>>CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22               (192 aa)
 initn: 1220 init1: 1185 opt: 1185  Z-score: 1454.4  bits: 275.9 E(32554): 1.1e-74
Smith-Waterman score: 1185; 88.5% identity (96.9% similar) in 192 aa overlap (1-192:1-192)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
CCDS13 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       :::::::::::::::::::::::::::::.:::::::.:::::::: :::.:::::::::
CCDS13 QEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :::::::.:..:::::::::::::.:.:: ::::::::::::::::::::::::::::: 
CCDS13 DDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQ
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
       :...  . :...
CCDS13 PTRQQKRACSLL
              190  

>>CCDS222.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 994 init1: 917 opt: 946  Z-score: 1162.6  bits: 221.9 E(32554): 2e-58
Smith-Waterman score: 946; 70.3% identity (88.0% similar) in 192 aa overlap (1-192:1-191)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.::::::::::::::::::::::: ::.::.:::::::...::. :.: .:::.::::
CCDS22 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       :::::::::::::::::::.:::.:::.:::::. :: ::. ::::.::.:::::..:::
CCDS22 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :: .:::.:  .:  :::   .  .::.. .:::.:::::::::::.:::::: :.: ::
CCDS22 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPP
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
        .. : .:: .:
CCDS22 ETQ-PKRKCCIF
               190 

>>CCDS221.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 948 init1: 920 opt: 929  Z-score: 1141.8  bits: 218.0 E(32554): 2.8e-57
Smith-Waterman score: 929; 69.3% identity (88.5% similar) in 192 aa overlap (1-192:1-191)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.::::::::::::::::::::::: ::.::.:::::::...::. :.: .:::.::::
CCDS22 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       :::::::::::::::::::.:::.:::.:::::. :: ::. ::::.::.:::::..:::
CCDS22 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
       :: .:::.:  .:  :::   .  .::.. .:::.:::::::.:::.:::::: :.: ::
CCDS22 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
         :: ...:...
CCDS22 EPKK-SRRCVLL
               190 

>>CCDS7748.1 RHOG gene_id:391|Hs108|chr11                 (191 aa)
 initn: 947 init1: 909 opt: 922  Z-score: 1133.2  bits: 216.4 E(32554): 8.4e-57
Smith-Waterman score: 922; 69.8% identity (85.9% similar) in 192 aa overlap (1-192:1-191)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::.:::::::::::::::::: ::::::: ::::::::::::.  :::. :::.::::::
CCDS77 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
       ::.::::: ::::::.::.::::..:: :.:::: ::.::: :::: .:::::::: :::
CCDS77 QEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
        . ::..::...  ::::  :: :.:..: .:.::::::: : :.: :: ::.:::: : 
CCDS77 AQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAEAVRAVLNPT
              130       140       150       160       170       180

              190  
pF1KB6 PVKKPGKKCTVF
       :.:. :..: ..
CCDS77 PIKR-GRSCILL
               190 

>>CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2               (205 aa)
 initn: 849 init1: 817 opt: 829  Z-score: 1019.3  bits: 195.4 E(32554): 1.9e-50
Smith-Waterman score: 829; 64.6% identity (83.6% similar) in 189 aa overlap (4-189:10-198)

                     10        20        30        40        50    
pF1KB6       MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLG
                .::::::::::::::::.::...::: ::.:::::.:...: : ::   ::
CCDS33 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB6 LWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVG
       :.:::::::::::::::::.:::::::::.:.::::.::. .: ::.... :..:.::.:
CCDS33 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KB6 TKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIR
       :..:::::  :. :: : :  ::   ::  .:.:::.  :.:::::::.:::::::::: 
CCDS33 TQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAII
              130       140       150       160       170       180

          180          190      
pF1KB6 AVLCPPP--VKKP-GKKCTVF    
       :.: :    :::  :..:       
CCDS33 AILTPKKHTVKKRIGSRCINCCLIT
              190       200     

>>CCDS9757.1 RHOJ gene_id:57381|Hs108|chr14               (214 aa)
 initn: 776 init1: 776 opt: 786  Z-score: 966.5  bits: 185.7 E(32554): 1.6e-47
Smith-Waterman score: 786; 60.3% identity (82.5% similar) in 189 aa overlap (2-190:20-205)

                                 10        20        30        40  
pF1KB6                   MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA
                          . .::::::::::::::::.::...::: ::.:::::.:..
CCDS97 MNCKEGTDSSCGCRGNDEKKMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV
               10        20        30        40        50        60

             50        60        70        80        90       100  
pF1KB6 NVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR
       .: : ::   :::.::::::::..:::::::.:::::::::.:.:::..::. .: ::..
CCDS97 TVTVGGKQHLLGLYDTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELK
               70        80        90       100       110       120

            110       120       130       140       150       160  
pF1KB6 HHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQ
          ::.: .:.::..:::::  :. ::   :  :.:: .:. .:. ::.  :::::::::
CCDS97 DCMPHVPYVLIGTQIDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQ
              130       140       150       160       170       180

            170       180       190         
pF1KB6 RGLKTVFDEAIRAVLCPPPVKKPGKKCTVF       
       .:::.:::::: ... :   ::  :.:.         
CCDS97 KGLKAVFDEAILTIFHP---KKKKKRCSEGHSCCSII
              190          200       210    

>>CCDS5349.1 RAC1 gene_id:5879|Hs108|chr7                 (211 aa)
 initn: 1244 init1: 719 opt: 729  Z-score: 897.0  bits: 172.9 E(32554): 1.2e-43
Smith-Waterman score: 1184; 84.4% identity (89.6% similar) in 211 aa overlap (1-192:1-211)

               10        20        30        40        50        60
pF1KB6 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
               10        20        30        40        50        60

               70                           80        90       100 
pF1KB6 QEDYDRLRPLSYPQT-------------------DVFLICFSLVSPASFENVRAKWYPEV
       :::::::::::::::                   ::::::::::::::::::::::::::
CCDS53 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV
               70        80        90       100       110       120

             110       120       130       140       150       160 
pF1KB6 RHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALT
       :::::.:::.::::::::::::::::.:..:::.:::::::::::.:::.::::::::::
CCDS53 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT
              130       140       150       160       170       180

             170       180       190  
pF1KB6 QRGLKTVFDEAIRAVLCPPPVKKPGKKCTVF
       :::::::::::::::::::::::  .:: ..
CCDS53 QRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL
              190       200       210 

>>CCDS2795.1 RHOA gene_id:387|Hs108|chr3                  (193 aa)
 initn: 701 init1: 701 opt: 704  Z-score: 866.9  bits: 167.2 E(32554): 5.7e-42
Smith-Waterman score: 704; 55.1% identity (75.0% similar) in 196 aa overlap (1-192:1-193)

                 10        20        30        40        50        
pF1KB6 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT
       : ::  : :.::::: ::::::: .. . ::  :.::::.:: :.. :::: :.:.::::
CCDS27 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB6 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLD
       :::::::::::::::.:::.:.:::. :: :.::.  :: :::.: ::..::.:::.: :
CCDS27 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
               70        80        90       100       110       120

      120       130       140       150       160       170        
pF1KB6 LRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLC
       ::.:. : ..:   :  :.   .:  :: .::.  :.:::: :. :.. ::. : ::.: 
CCDS27 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL-
              130       140       150       160       170          

      180         190  
pF1KB6 PPPVKKPGKK--CTVF
          ...  ::  : :.
CCDS27 --QARRGKKKSGCLVL
       180       190   




192 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 14:50:37 2016 done: Fri Nov  4 14:50:37 2016
 Total Scan time:  2.080 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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