FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2488, 360 aa 1>>>pF1KE2488 360 - 360 aa - 360 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.2002+/-0.000977; mu= -15.5708+/- 0.059 mean_var=512.6227+/-104.667, 0's: 0 Z-trim(118.8): 11 B-trim: 214 in 1/54 Lambda= 0.056647 statistics sampled from 19833 (19843) to 19833 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.848), E-opt: 0.2 (0.61), width: 16 Scan time: 2.960 The best scores are: opt bits E(32554) CCDS7993.1 CCDC86 gene_id:79080|Hs108|chr11 ( 360) 2454 214.0 1.6e-55 >>CCDS7993.1 CCDC86 gene_id:79080|Hs108|chr11 (360 aa) initn: 2454 init1: 2454 opt: 2454 Z-score: 1110.3 bits: 214.0 E(32554): 1.6e-55 Smith-Waterman score: 2454; 100.0% identity (100.0% similar) in 360 aa overlap (1-360:1-360) 10 20 30 40 50 60 pF1KE2 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MDTPLRRSRRLGGLRPESPESLTSVSRTRRALVEFESNPEETREPGSPPSVQRAGLGSPE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 RPPKTSPGSPRLQQGAGLESPQGQPEPGAASPQRQQDLHLESPQRQPEYSPESPRCQPKP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 SEEAPKCSQDQGVLASELAQNKEELTPGAPQHQLPPVPGSPEPYPGQQAPGPEPSQPLLE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 LTPRAPGSPRGQHEPSKPPPAGETVTGGFGAKKRKGSSSQAPASKKLNKEELPVIPKGKP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 KSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 KSGRVWKDRSKKRFSQMLQDKPLRTSWQRKMKERQERKLAKDFARHLEEEKERRRQEKKQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 RRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 RRAENLKRRLENERKAEVVQVIRNPAKLKRAKKKQLRSIEKRDTLALLQKQPPQQPAAKI 310 320 330 340 350 360 360 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 20:51:01 2016 done: Mon Nov 7 20:51:01 2016 Total Scan time: 2.960 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]