Result of FASTA (ccds) for pF1KE2300
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE2300, 857 aa
  1>>>pF1KE2300 857 - 857 aa - 857 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.9726+/-0.00134; mu= -12.8422+/- 0.077
 mean_var=406.6651+/-95.220, 0's: 0 Z-trim(106.3): 288  B-trim: 0 in 0/51
 Lambda= 0.063600
 statistics sampled from 8601 (8888) to 8601 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.273), width:  16
 Scan time:  4.400

The best scores are:                                      opt bits E(32554)
CCDS4993.1 TTK gene_id:7272|Hs108|chr6             ( 857) 5664 535.7 1.4e-151
CCDS55040.1 TTK gene_id:7272|Hs108|chr6            ( 856) 5645 533.9 4.5e-151


>>CCDS4993.1 TTK gene_id:7272|Hs108|chr6                  (857 aa)
 initn: 5664 init1: 5664 opt: 5664  Z-score: 2835.1  bits: 535.7 E(32554): 1.4e-151
Smith-Waterman score: 5664; 100.0% identity (100.0% similar) in 857 aa overlap (1-857:1-857)

               10        20        30        40        50        60
pF1KE2 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE2 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE2 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE2 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE2 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE2 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE2 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE2 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS49 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
              790       800       810       820       830       840

              850       
pF1KE2 SHNSSSSKTFEKKRGKK
       :::::::::::::::::
CCDS49 SHNSSSSKTFEKKRGKK
              850       

>>CCDS55040.1 TTK gene_id:7272|Hs108|chr6                 (856 aa)
 initn: 2936 init1: 2936 opt: 5645  Z-score: 2825.7  bits: 533.9 E(32554): 4.5e-151
Smith-Waterman score: 5645; 99.9% identity (99.9% similar) in 857 aa overlap (1-857:1-856)

               10        20        30        40        50        60
pF1KE2 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMAN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE2 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE2 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE2 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE2 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE2 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE2 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS55 ESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTE-
              370       380       390       400       410          

              430       440       450       460       470       480
pF1KE2 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQ
     420       430       440       450       460       470         

              490       500       510       520       530       540
pF1KE2 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVF
     480       490       500       510       520       530         

              550       560       570       580       590       600
pF1KE2 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM
     540       550       560       570       580       590         

              610       620       630       640       650       660
pF1KE2 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML
     600       610       620       630       640       650         

              670       680       690       700       710       720
pF1KE2 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL
     660       670       680       690       700       710         

              730       740       750       760       770       780
pF1KE2 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI
     720       730       740       750       760       770         

              790       800       810       820       830       840
pF1KE2 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGE
     780       790       800       810       820       830         

              850       
pF1KE2 SHNSSSSKTFEKKRGKK
       :::::::::::::::::
CCDS55 SHNSSSSKTFEKKRGKK
     840       850      




857 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 03:01:21 2016 done: Mon Nov  7 03:01:22 2016
 Total Scan time:  4.400 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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