GENSCAN 1.0 Date run: 5-Nov-116 Time: 20:18:32 Sequence gi568815586f:93472898_93675176 : 202279 bp : 41.24% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Intr + 14600 14763 164 1 2 68 127 102 0.108 9.95 1.02 Intr + 44366 44488 123 2 0 64 103 57 0.530 3.58 1.03 Term + 48556 48934 379 1 1 81 52 162 0.622 5.18 1.04 PlyA + 49005 49010 6 1.05 2.02 PlyA - 50564 50559 6 1.05 2.01 Sngl - 56976 56527 450 0 0 16 49 277 0.741 12.56 2.00 Prom - 59121 59082 40 -5.25 3.00 Prom + 59651 59690 40 -6.05 3.01 Init + 62353 62425 73 0 1 86 33 83 0.071 3.88 3.02 Intr + 91620 91709 90 1 0 111 98 35 0.638 5.85 3.03 Intr + 97501 97645 145 2 1 100 21 188 0.134 11.72 3.04 Intr + 98676 98730 55 0 1 127 27 55 0.056 1.36 3.05 Intr + 99899 100139 241 1 1 81 91 83 0.007 4.10 3.06 Term + 101825 102282 458 0 2 30 36 385 0.014 21.80 3.07 PlyA + 102531 102536 6 1.05 4.05 PlyA - 103252 103247 6 1.05 4.04 Term - 118870 118602 269 2 2 56 48 180 0.009 5.47 4.03 Intr - 124305 124284 22 0 1 50 90 36 0.009 -3.80 4.02 Intr - 130093 129911 183 1 0 44 113 130 0.574 10.16 4.01 Init - 159523 159338 186 1 0 83 66 127 0.686 9.10 4.00 Prom - 164083 164044 40 -3.95 5.02 PlyA - 165804 165799 6 1.05 5.01 Sngl - 168689 167925 765 2 0 122 49 1051 0.870 100.44 5.00 Prom - 170318 170279 40 -7.45 6.00 Prom + 171203 171242 40 -1.55 6.01 Init + 185070 185215 146 2 2 77 71 99 0.528 6.74 6.02 Term + 190583 190808 226 2 1 70 33 153 0.568 3.27 6.03 PlyA + 190962 190967 6 1.05 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Sngl + 24154 24459 306 0 0 49 43 238 0.992 11.02 S.002 Term + 99788 99990 203 0 2 123 46 158 0.875 11.67 S.003 Init - 130617 130591 27 0 0 105 81 25 0.949 3.16 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_1|221_aa PIPRPDPVHNNEETHDQVLKTRLEEKVEHLEEGPMIEQLSKMFFTTKHRWYPHGRGNWYL ETKIWCSIPFKKLVCEGLWLYDHTWDWKYRGDTWLSLTLASEWGEMCMLHSAIQGYSLLP SGSGGFPIPWGRGLLFWIEGTQPAGKEERMWKTEDHALAFNGQPWGGGLKSLPLTSHWSE QSFMQAHRCNCKTAGNYALAVCRGRRETQTLVNVSLLGFTL >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_1|666_bp cctatccctcggccagatcctgtgcataataatgaagaaacacatgatcaagtgctgaaa accagattggaagaaaaagttgaacaccttgaggaaggacctatgatagaacaacttagc aaaatgttctttactactaagcaccgttggtatcctcatggacgtggaaactggtatcta gaaaccaagatctggtgtagtattcctttcaagaagcttgtctgtgaagggttatggctg tatgatcacacgtgggactggaagtacagaggggatacctggctcagtctaactctggcc agtgaatggggagaaatgtgtatgctccacagtgccattcagggatacagcctccttcca agtggtagtggtggcttccccattccttggggccgtgggctcctcttctggattgagggc acccagccagctggcaaggaagaaagaatgtggaaaacagaggatcatgcgctagctttc aatggccagccctggggggggggactcaaatcacttccactcacatcccattggtcagaa caaagttttatgcaagctcaccgctgcaactgcaagacagctgggaactatgctctagcg gtgtgccgtggaagaagagaaactcaaacactggtgaatgttagcttgcttggcttcact ctctga >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_2|149_aa MKDGKIKSRDFALITFESPADAKNAANDMKGKSLDGKAIQVEQANEPSFESGVRWRPPSP SRNRGPPRCLRCGRKGSGGAKGHPSGGGHMDDGGYTLNANMSSSRTGVPSLLGTRGQFHE RQFFYRPGVGGDGFGMKLFHLRSSGIRFS >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_2|450_bp atgaaggatgggaaaatcaagtccagagactttgcattgattacttttgagagccctgca gatgctaagaatgctgccaacgatatgaagggaaagtctttggatggaaaagcaattcaa gtagagcaagccaacgaaccatcttttgaaagtggtgttaggtggagaccaccatctcct tcgagaaacagaggccctccaagatgtctgagatgtggaagaaaaggtagtggaggagca aaagggcatccctcaggtggaggacacatggatgatggcggatacactcttaatgccaac atgagttcttctaggacaggggtccccagccttttgggcaccaggggccagtttcatgaa agacaatttttctatagaccaggggtcgggggggatggtttcgggatgaaactgttccac ctcagatcatcaggtattagattctcataa >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_3|353_aa MVEGEGEAGMSFMAREGGGDRERGGTIVLGPGSWRLSRNFKKAKLFLVAHQSLKGPDQGD RLRSPAVGTGTSTASPRHRCVLEPESLVSEDPQSLLHAHPPQKVAAGGKPGSSPRVEVSQ PGLVLGFALTSRKDANPSLTPARAATCLCRGDPSLMTLRCLEPSGNGGEGTRSQWGTAGS AEEPSPQAARLAKALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTIS VKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRN GTVHLYLTKPLYTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQV >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_3|1062_bp atggtggaaggtgaaggagaagcaggcatgtctttcatggccagagaaggaggaggagat agagaaaggggaggtactattgttttggggccaggctcatggagattaagcaggaacttc aagaaagccaagctcttcttggtagcacaccagagtctgaagggacctgatcaaggggac cgcctccggtccccggccgtgggcaccgggacgagcacggcgtccccacgccatcgatgt gtcttagagccggagagtctggtttccgaggacccacagtcgctcctgcacgcccacccc ccgcaaaaggtcgcagccggagggaaacccggcagcagtccgagagtggaggtgtcccag cccggactcgttttgggattcgcactgacttcaaggaaggacgcgaacccttctctgacc ccagctcgggcggccacctgtctttgccgcggtgacccttctctcatgaccctgcggtgc cttgagccctccgggaatggcggggaagggacgcggagccagtgggggaccgcggggtcg gcggaggagccatccccgcaggcggcgcgtctggcgaaggccctgcgggagctcggtcag acaggatggtactggggaagtatgactgttaatgaagccaaagagaaattaaaagaggca ccagaaggaactttcttgattagagatagctcgcattcagactacctactaacaatatct gttaaaacatcagctggaccaactaatcttcgaatcgaataccaagacggaaaattcaga ttggactctatcatatgtgtcaaatccaagcttaaacaatttgacagtgtggttcatctg atcgactactatgttcagatgtgcaaggataagcggacaggtccagaagccccccggaac ggcactgttcacctttatctgaccaaaccgctctacacgtcagcaccatctctgcagcat ctctgtaggctcaccattaacaaatgtaccggtgccatctggggactgcctttaccaaca agactaaaagattacttggaagaatataaattccaggtataa >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_4|219_aa MAEGEEEADTFFTTWQERDSKGGNATFKTIRSHENSLTIMRTARGKLPPMIQSPPTRCRP RHGSLDNPVKQAQQRSLGQALCQLLHLENYKDGKDPDDNLAVSCMSSLTSVFSLSPPSPR RVKWWLRQSTVKRLDVGQPVTGSLLPTLGYIRSWETRAAPRTRLGGAATPQLRGAPHSTL ATDKKNFCCITPWRQDHFPLERQCVHIVDARASPCRNSV >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_4|660_bp atggcagaaggtgaagaggaagcagacaccttcttcacaacgtggcaggagagagatagc aaagggggaaatgccacttttaaaaccatcagatctcatgagaactcacttactatcatg agaacagcacggggcaaactgccccccatgatccaatcacctcccaccaggtgccgccct cgacacggaagtttggacaacccagtaaagcaggcccagcagcgctctctaggccaggcc ctttgtcagctacttcacctagaaaactacaaagatggaaaggacccagatgacaacctg gctgtgagttgtatgagttcactgacttctgtgttttccctgtcaccaccctctcctcgc agagtcaagtggtggttacgccaatctacagtgaaacgccttgacgttggtcagcctgtg accggctccttgctgccgacgctgggttacataaggtcctgggagacccgagcggcgccc cggacgcgtctgggaggagccgccacgccacagctccgtggggctccgcactctaccctg gccacagacaaaaagaacttctgctgcatcaccccgtggcgccaggatcacttccctctt gagagacagtgtgtgcacatcgtagacgctagagccagcccctgcaggaactccgtttga >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_5|254_aa MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQ KRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR VLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVR KAMEAVAAQGKAKK >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_5|765_bp atggccgcctacaaactggtgctgatccggcacggcgagagcgcatggaacctggagaac cgcttcagcggctggtacgacgccgacctgagcccggcgggccacgaggaggcgaagcgc ggcgggcaggcgctacgagatgctggctatgagtttgacatctgcttcacctcagtgcag aagagagcgatccggaccctctggacagtgctagatgccattgatcagatgtggctgcca gtggtgaggacttggcgcctcaatgagcggcactatgggggtctaaccggtctcaataaa gcagaaactgctgcaaagcatggtgaggcccaggtgaagatctggaggcgctcctatgat gtcccaccacctccgatggagcccgaccatcctttctacagcaacatcagtaaggatcgt aggtatgcagacctcacagaagatcagctaccctcctgtgagagtctgaaggatactatt gccagagctctgcccttctggaatgaagaaatagttccccagatcaaggaggggaaacgt gtactgattgcagcccatggcaacagcctccggggcattgtcaagcatctggagggtctc tctgaagaggctatcatggagctgaacctgccgactggtattcccattgtctatgaattg gacaagaacttgaagcctatcaagcccatgcagtttctgggggatgaagagacggtgcgc aaagccatggaagctgtggctgcccagggcaaggccaagaagtga >gi568815586f:93472898_93675176|GENSCAN_predicted_peptide_6|123_aa MVTAEHYTKQEALSSLGPMKPVLPKGTEKISLELNLSFWWECPSQIRIRTYISSPARLSG IWPWTESYTIGFPGSKAFGLGLSHAVNISGLQFVNGLSWDFLAFIIAEPISLINPLSYIY ISY >gi568815586f:93472898_93675176|GENSCAN_predicted_CDS_6|372_bp atggtgacagcagagcattacaccaagcaggaagccctttctagcctggggcccatgaag ccagtcctgccaaaggggaccgaaaagatttcactggagctcaacctttcattttggtgg gaatgcccaagccagatcagaattaggacttacatcagcagccccgccaggctttcaggc atttggccttggactgagagttacacaattggcttccctggttctaaggcctttggactt ggactgagccatgctgtcaacatctcaggtctccagtttgtgaatggcctgtcatgggac ttcttagccttcataattgcagagccaatttccctaataaatcctctgtcatatatctat atctcttattag