Result of FASTA (ccds) for pF1KE0549
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0549, 154 aa
  1>>>pF1KE0549 154 - 154 aa - 154 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1341+/-0.000607; mu= 13.6053+/- 0.037
 mean_var=69.0881+/-13.532, 0's: 0 Z-trim(111.7): 63  B-trim: 0 in 0/52
 Lambda= 0.154302
 statistics sampled from 12535 (12600) to 12535 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.387), width:  16
 Scan time:  1.630

The best scores are:                                      opt bits E(32554)
CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22        ( 154) 1056 243.0 5.4e-65
CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22        ( 212) 1006 232.0 1.5e-61
CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22        ( 122)  787 183.1 4.7e-47
CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11         ( 153)  594 140.2 4.9e-34
CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7         ( 147)  410 99.2   1e-21
CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10         ( 147)  404 97.9 2.5e-21
CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5         ( 147)  399 96.8 5.5e-21
CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4          ( 148)  393 95.4 1.4e-20
CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4          ( 147)  391 95.0 1.9e-20
CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5         ( 118)  387 94.0 2.9e-20
CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4          ( 149)  387 94.1 3.5e-20
CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4         ( 118)  381 92.7 7.4e-20
CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10        ( 109)  368 89.8 5.2e-19
CCDS7961.1 UBE2L6 gene_id:9246|Hs108|chr11         (  87)  348 85.2 9.5e-18
CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1          ( 197)  347 85.3 2.1e-17
CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3          ( 193)  337 83.0 9.7e-17
CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3          ( 201)  337 83.1   1e-16
CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2         ( 207)  337 83.1   1e-16
CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12         ( 152)  333 82.1 1.5e-16
CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3         ( 160)  332 81.9 1.8e-16
CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3          ( 176)  330 81.5 2.7e-16
CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX          ( 152)  308 76.5 7.1e-15
CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5           ( 152)  303 75.4 1.5e-14
CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4          ( 200)  296 73.9 5.6e-14
CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19         ( 183)  293 73.2 8.3e-14
CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX          ( 119)  279 70.0 5.1e-13
CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4          ( 157)  273 68.7 1.6e-12
CCDS5814.1 UBE2H gene_id:7328|Hs108|chr7           ( 183)  264 66.8 7.3e-12
CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16         ( 158)  256 64.9 2.2e-11
CCDS6546.1 UBE2R2 gene_id:54926|Hs108|chr9         ( 238)  251 64.0 6.7e-11
CCDS32532.1 UBE2G1 gene_id:7326|Hs108|chr17        ( 170)  249 63.4   7e-11


>>CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22             (154 aa)
 initn: 1056 init1: 1056 opt: 1056  Z-score: 1280.4  bits: 243.0 E(32554): 5.4e-65
Smith-Waterman score: 1056; 100.0% identity (100.0% similar) in 154 aa overlap (1-154:1-154)

               10        20        30        40        50        60
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 YPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 YPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP
               70        80        90       100       110       120

              130       140       150    
pF1KE0 LRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::::::::::::::::::::::::::::::::::
CCDS13 LRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
              130       140       150    

>>CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22             (212 aa)
 initn: 1003 init1: 1003 opt: 1006  Z-score: 1218.3  bits: 232.0 E(32554): 1.5e-61
Smith-Waterman score: 1006; 94.9% identity (96.8% similar) in 156 aa overlap (1-154:57-212)

                                               10        20        
pF1KE0                               MAASRRLM--KELEEIRKCGMKNFRNIQVD
                                     .:. ::    .:::::::::::::::::::
CCDS58 VLGQRRARLLRQVPSALAGKDLAQLQAGATLAGYRRAHGPEELEEIRKCGMKNFRNIQVD
         30        40        50        60        70        80      

       30        40        50        60        70        80        
pF1KE0 EANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLP
         90       100       110       120       130       140      

       90       100       110       120       130       140        
pF1KE0 VISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYG
        150       160       170       180       190       200      

      150    
pF1KE0 EKRPVD
       ::::::
CCDS58 EKRPVD
        210  

>>CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22             (122 aa)
 initn: 787 init1: 787 opt: 787  Z-score: 958.2  bits: 183.1 E(32554): 4.7e-47
Smith-Waterman score: 787; 97.4% identity (99.1% similar) in 116 aa overlap (39-154:7-122)

       10        20        30        40        50        60        
pF1KE0 KELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKI
                                     .. :::::::::::::::::::::::::::
CCDS58                         MAASRRLMKDNPPYDKGAFRIEINFPAEYPFKPPKI
                                       10        20        30      

       70        80        90       100       110       120        
pF1KE0 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEE
         40        50        60        70        80        90      

      130       140       150    
pF1KE0 YSKDRKKFCKNAEEFTKKYGEKRPVD
       ::::::::::::::::::::::::::
CCDS58 YSKDRKKFCKNAEEFTKKYGEKRPVD
        100       110       120  

>>CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11              (153 aa)
 initn: 594 init1: 594 opt: 594  Z-score: 724.6  bits: 140.2 E(32554): 4.9e-34
Smith-Waterman score: 594; 55.3% identity (80.3% similar) in 152 aa overlap (1-152:1-152)

               10        20        30        40        50        60
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAE
       : :: :..::::...:     .::.. :.::.:.:..:..::.:::   :: ..:.:: :
CCDS79 MMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 YPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP
       :::::: : : :::::::.::.::.:::.::.::::: ::: ::...: .::: :. ..:
CCDS79 YPFKPPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREP
               70        80        90       100       110       120

              130       140       150    
pF1KE0 LRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       :: :::.  ... . : ::::::: ..:  ::  
CCDS79 LRMDLADLLTQNPELFRKNAEEFTLRFGVDRPS 
              130       140       150    

>>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7              (147 aa)
 initn: 391 init1: 232 opt: 410  Z-score: 503.5  bits: 99.2 E(32554): 1e-21
Smith-Waterman score: 410; 39.7% identity (74.7% similar) in 146 aa overlap (3-147:2-145)

               10        20        30        40         50         
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPA
         : .:..::: ....    .     : . .:. ::. :. :.. ::. :.: . :.::.
CCDS54  MALKRIQKELTDLQRDPPAQCSAGPVGD-DLFHWQATIMGPNDSPYQGGVFFLTIHFPT
                10        20         30        40        50        

      60        70        80        90       100       110         
pF1KE0 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH
       .:::::::..: ::::::::. .:..:: .. .. :.::  ...:. :. .:. ::.:. 
CCDS54 DYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQ-WSPALTVSKVLLSICSLLCDPNPDD
       60        70        80        90        100       110       

     120       130       140       150    
pF1KE0 PLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::  ..:. :. ::.:. . :.:.:.::       
CCDS54 PLVPEIAHTYKADREKYNRLAREWTQKYAM     
       120       130       140            

>>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10              (147 aa)
 initn: 358 init1: 184 opt: 404  Z-score: 496.3  bits: 97.9 E(32554): 2.5e-21
Smith-Waterman score: 404; 39.0% identity (74.7% similar) in 146 aa overlap (3-147:2-145)

               10        20        30        40         50         
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPA
         : .:..::: ....    .     : . .:. ::. :. : .  :. :.: . ..::.
CCDS72  MALKRIQKELSDLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPT
                10        20         30        40        50        

      60        70        80        90       100       110         
pF1KE0 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH
       .::::::::.: ::::::::. .:..:: .. .. :.::  ...:. :. .:. ::.:. 
CCDS72 DYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ-WSPALTVSKVLLSICSLLCDPNPDD
       60        70        80        90        100       110       

     120       130       140       150    
pF1KE0 PLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::  :.:. :..:..:. ..:.:.:.::       
CCDS72 PLVPDIAQIYKSDKEKYNRHAREWTQKYAM     
       120       130       140            

>>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5              (147 aa)
 initn: 385 init1: 229 opt: 399  Z-score: 490.2  bits: 96.8 E(32554): 5.5e-21
Smith-Waterman score: 399; 38.4% identity (73.3% similar) in 146 aa overlap (3-147:2-145)

               10        20        30        40         50         
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPA
         : .:. :::... .    .     : . ... ::. :. :.. ::. :.: . :.::.
CCDS43  MALKRIHKELNDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPT
                10        20         30        40        50        

      60        70        80        90       100       110         
pF1KE0 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH
       .:::::::..: :.::::::. .:..:: .. .. :.::   ..:. :. .:. ::.:. 
CCDS43 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDD
       60        70        80        90        100       110       

     120       130       140       150    
pF1KE0 PLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::  ..:. :. ::.:. . :.:.:.::       
CCDS43 PLVPEIARIYKTDREKYNRIAREWTQKYAM     
       120       130       140            

>>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4               (148 aa)
 initn: 381 init1: 229 opt: 393  Z-score: 483.0  bits: 95.4 E(32554): 1.4e-20
Smith-Waterman score: 393; 38.4% identity (71.9% similar) in 146 aa overlap (3-147:2-145)

               10        20        30        40         50         
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPA
         : .:. ::: .. .    .     : . ... ::. :. :.. ::. :.: . :.::.
CCDS36  MALKRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPT
                10        20         30        40        50        

      60        70        80        90       100       110         
pF1KE0 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH
       .:::::::..: :.::::::. .:..:: .. .. :.::   ..:. :. .:. ::.:. 
CCDS36 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDD
       60        70        80        90        100       110       

     120       130       140       150    
pF1KE0 PLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::  ..:. :. :: :. . :.:.:.::       
CCDS36 PLVPEIARIYKTDRDKYNRLAREWTEKYAML    
       120       130       140            

>>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4               (147 aa)
 initn: 379 init1: 229 opt: 391  Z-score: 480.6  bits: 95.0 E(32554): 1.9e-20
Smith-Waterman score: 391; 37.7% identity (71.9% similar) in 146 aa overlap (3-147:2-145)

               10        20        30        40         50         
pF1KE0 MAASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPA
         : .:. ::: .. .    .     : . ... ::. :. :.. ::. :.: . :.::.
CCDS36  MALKRINKELSDLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPT
                10        20         30        40        50        

      60        70        80        90       100       110         
pF1KE0 EYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEH
       .:::::::..: :.::::::. .:..:: .. .. :.::   ..:. :. .:. ::.:. 
CCDS36 DYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDD
       60        70        80        90        100       110       

     120       130       140       150    
pF1KE0 PLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       ::  ..:. :. :: :. . ..:.:.::       
CCDS36 PLVPEIARIYKTDRDKYNRISREWTQKYAM     
       120       130       140            

>>CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5              (118 aa)
 initn: 372 init1: 216 opt: 387  Z-score: 477.2  bits: 94.0 E(32554): 2.9e-20
Smith-Waterman score: 387; 42.7% identity (78.6% similar) in 117 aa overlap (32-147:1-116)

              10        20        30        40         50        60
pF1KE0 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAE
                                     .. ::. :. :.. ::. :.: . :.::..
CCDS47                               MFHWQATIMGPNDSPYQGGVFFLTIHFPTD
                                             10        20        30

               70        80        90       100       110       120
pF1KE0 YPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHP
       :::::::..: :.::::::. .:..:: .. .. :.::   ..:. :. .:. ::.:. :
CCDS47 YPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDP
               40        50        60         70        80         

              130       140       150    
pF1KE0 LRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
       :  ..:. :. ::.:. . :.:.:.::       
CCDS47 LVPEIARIYKTDREKYNRIAREWTQKYAM     
      90       100       110             




154 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 23:56:08 2016 done: Wed Nov  2 23:56:08 2016
 Total Scan time:  1.630 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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