GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:25:48

Sequence gi568815588f:101031542_101236910 : 205369 bp : 50.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3151   3314  164  0  2  135   60   177 0.996  18.37
 1.02 Intr +   3956   4130  175  2  1   89   22   243 0.892  17.74
 1.03 Intr +   4403   4560  158  1  2   52   78    61 0.628   0.31
 1.04 Intr +   4945   5020   76  1  1  116   98    52 0.964   8.52
 1.05 Intr +   5182   5267   86  0  2   94  105    91 0.956  10.02
 1.06 Intr +   5535   5662  128  0  2  139   82   115 0.992  16.32
 1.07 Intr +   5841   5890   50  1  2   98  102    63 0.995   7.10
 1.08 Intr +   7102   7151   50  0  2  121  119    -8 0.962   3.08
 1.09 Term +   7948   8044   97  1  1   93   55    93 0.969   3.94
 1.10 PlyA +   9479   9484    6                               1.05

 2.00 Prom +  13208  13247   40                              -4.76
 2.01 Init +  15266  15333   68  1  2   67   96    80 0.822   5.40
 2.02 Intr +  16549  16621   73  1  1   94   81    35 0.634   2.81
 2.03 Term +  16709  17074  366  1  0   93   45   112 0.563   2.00
 2.04 PlyA +  18385  18390    6                               1.05

 3.00 Prom +  26730  26769   40                              -2.96
 3.01 Init +  31052  31562  511  1  1   78   75   711 0.748  61.89
 3.02 Intr +  32720  32880  161  0  2   99   74   212 0.886  20.61
 3.03 Intr +  32960  33107  148  1  1   56   95   152 0.934  12.51
 3.04 Term +  33285  33379   95  1  2  112   42   107 0.991   6.49
 3.05 PlyA +  34026  34031    6                               1.05

 4.05 PlyA -  34596  34591    6                               1.05
 4.04 Term -  58582  58553   30  1  0  108   44    51 0.121   0.55
 4.03 Intr -  62129  61994  136  1  1  108   60    23 0.079   2.07
 4.02 Intr -  83699  83578  122  2  2  120   32    58 0.105   2.69
 4.01 Init -  87621  87562   60  0  0   89   69    17 0.096   1.16
 4.00 Prom -  89157  89118   40                              -4.76

 5.00 Prom +  94882  94921   40                              -2.26
 5.01 Init + 100001 100568  568  1  1  109  109   594 0.976  58.83
 5.02 Intr + 102634 102835  202  2  1   68   83   400 0.535  35.84
 5.03 Intr + 105150 105368  219  0  0   55   46   354 0.676  25.32
 5.04 Intr + 107896 108079  184  1  1  105   46    41 0.486   1.39
 5.05 Intr + 108484 108619  136  0  1  118   96    48 0.848   8.74
 5.06 Intr + 110384 110479   96  0  0  132   79    -8 0.779   2.68
 5.07 Intr + 110736 110863  128  1  2   47   72    76 0.891   2.30
 5.08 Intr + 114133 114270  138  0  0   56  105    39 0.434   3.06
 5.09 Intr + 115456 115577  122  0  2   44   61    94 0.302   1.59
 5.10 Intr + 130319 130440  122  2  2   48   76   101 0.123   5.04
 5.11 Intr + 135600 135672   73  1  1   16   92    53 0.002  -3.04
 5.12 Intr + 150097 150204  108  1  0   87   90    36 0.002   3.10
 5.13 Term + 159769 159907  139  1  1   95   35    88 0.076   1.64
 5.14 PlyA + 163129 163134    6                               1.05

 6.00 Prom + 166779 166818   40                              -1.46
 6.01 Init + 173813 173973  161  1  2   67   97    84 0.814   4.51
 6.02 Intr + 179527 179555   29  1  2  124  105    -8 0.608   2.26
 6.03 Intr + 185994 186096  103  1  1   79   14   157 0.849   6.63
 6.04 Intr + 186434 186539  106  2  1   87   97    64 0.308   7.42
 6.05 Term + 195347 195397   51  1  0   90   42    99 0.621   2.93
 6.06 PlyA + 195406 195411    6                               1.05

 7.05 PlyA - 195560 195555    6                               1.05
 7.04 Term - 196249 195729  521  2  2  101   53   991 0.999  91.36
 7.03 Intr - 197389 196950  440  0  2   35  102   635 0.650  52.76
 7.02 Intr - 197662 197391  272  1  2   91   15   166 0.281   5.94
 7.01 Intr - 204802 204648  155  2  2  113   46    41 0.223   2.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_1|327_aa
KMGELPLDINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQLEASRNIVQNYRAGVVT
PGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTITGCMLTFYRQGSKDEGH
CRRGRSECLCSLRKTPTVVFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAV
ATALGLKSLTKHLPPLVGRFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGYSV
TAAKQGIFQVVISRICMAIPAMAIPPLIMDTLEKKDFLKRRPWLGAPLQVGLVGFCSIHI
SNLEPELRAQIHEQNPSVEVVYYNKGL

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_1|984_bp
aaaatgggtgaattgcctttagacatcaacatccaggaacctcgctgggaccaaagtact
ttcctgggcagagcccggcactttttcactgttactgatcctcgaaatctgctgctgtcc
ggggcacagctggaagcttctcggaacatcgtgcagaactacagggccggcgtggtgacc
ccagggatcaccgaggaccagctgtggagggccaagtatgtgtatgactccgccttccat
ccggacacaggggagaaggtggtcctgattggccgcatgtcagcccaggtgcccatgaac
atgaccatcactggctgcatgctcacattctacaggcaggggtctaaagatgagggccac
tgtagacggggcagaagtgagtgtctttgttccctcaggaagaccccaaccgtggtgttc
tggcagtgggtgaatcagtccttcaatgccattgttaactactccaaccgcagtggtgac
actcccatcactgtgaggcagctggggacagcctatgtgagtgccaccactggagctgtg
gccacggccctgggactcaaatccctcaccaagcacctgccccccttggtcggcagattt
gtgccctttgcagcagtggcagctgccaactgcatcaacatccccctgatgaggcagaga
gagctgcaggtgggcatcccggtggctgatgaggcaggtcagaggcttggctactcggtg
actgcagccaagcagggaatcttccaggtggtgatttcaagaatctgcatggcgattcct
gccatggccatcccaccactgatcatggacactctggagaagaaagacttcctgaagcgc
cgcccctggctgggggcacccctgcaggtgggactggtgggcttctgctccatacacata
agcaacctggaaccagagctgagagctcagatccatgagcaaaaccccagcgttgaagtg
gtctactacaacaaggggctttga

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_2|168_aa
MEAEDRGAPLCVYALYLPPSGTSPGSFIKGLRQLCSSPAAAPLALRKDIRNRQPRLIVAR
LRGREMSPDTAAAALASREPTRHGLGAPPAAAVAPLRLPFFSSYHSPAHLRLSGESSNGI
ASVSVLCCVADLGALEGKSWHFGEEGLALSRRLLQLSCCLDLRTSNLK

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_2|507_bp
atggaggctgaggaccgaggggcccctctttgtgtctatgctctgtatctcccgccgagc
ggcaccagcccgggcagcttcattaagggcctccgccagctctgcagctcacctgctgca
gcgcccctcgcgctccgcaaggacattagaaaccgtcaaccaagattaatagttgcccgg
ctccggggcagggagatgagcccagatactgcggcggcggcgctcgcttcgcgcgagcca
acccggcacgggctgggcgcaccacctgccgctgctgtcgctccactccgccttcctttc
ttctcctcctaccactcgcccgcgcacctgaggctctcaggtgagtccagcaatgggatt
gcgagcgtcagtgttctctgctgcgtcgccgacctgggcgcgctcgaaggcaagtcttgg
cacttcggggaagaagggctcgccctctccaggagactcctccagctttcctgctgcctc
gatttaaggacttccaaccttaaatga

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_3|304_aa
MLPPPRPAAALALPVLLLLLVVLTPPPTGARPSPGPDYLRRGWMRLLAEGEGCAPCRPEE
CAAPRGCLAGRVRDACGCCWECANLEGQLCDLDPSAHFYGHCGEQLECRLDTGGDLSRGE
VPEPLCACRSQSPLCGSDGHTYSQICRLQEAARARPDANLTVAHPGPCESGPQIVSHPYD
TWNVTGQDVIFGCEVFAYPMASIEWRKDGLDIQLPGDDPHISVQFRGGPQRFEVTGWLQI
QAVRPSDEGTYRCLGRNALGQVEAPASLTVLTPDQLNSTGIPQLRSLNLVPEEEAESEEN
DDYY

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_3|915_bp
atgctgccgccgccgcggcccgcagctgccttggcgctgcctgtgctcctgctactgctg
gtggtgctgacgccgcccccgaccggcgcaaggccatccccaggcccagattacctgcgg
cgcggctggatgcggctgctagcggagggcgagggctgcgctccctgccggccagaagag
tgcgccgcgccgcggggctgcctggcgggcagggtgcgcgacgcgtgcggctgctgctgg
gaatgcgccaacctcgagggccagctctgcgacctggaccccagtgctcacttctacggg
cactgcggcgagcagcttgagtgccggctggacacaggcggcgacctgagccgcggagag
gtgccggaacctctgtgtgcctgtcgttcgcagagtccgctctgcgggtccgacggtcac
acctactcccagatctgccgcctgcaggaggcggcccgcgctcggcccgatgccaacctc
actgtggcacacccggggccctgcgaatcggggccccagatcgtgtcacatccatatgac
acttggaatgtgacagggcaggatgtgatctttggctgtgaagtgtttgcctaccccatg
gcctccatcgagtggaggaaggatggcttggacatccagctgccaggggatgacccccac
atctctgtgcagtttaggggtggaccccagaggtttgaggtgactggctggctgcagatc
caggctgtgcgtcccagtgatgagggcacttaccgctgccttggccgcaatgccctgggt
caagtggaggcccctgctagcttgacagtgctcacacctgaccagctgaactctacaggc
atcccccagctgcgatcactaaacctggttcctgaggaggaggctgagagtgaagagaat
gacgattactactag

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_4|115_aa
MHLYYPPLKSMHSEMHTTTQVFGWFLKLNPPGFLLHLMQQEKFGQEGAVGADQASSGNTQ
GLFGTPLMSPGHPKTSPELTPLLTLTWTPVIRPAAAEAEKPQGLHGGCVILEATT

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_4|348_bp
atgcatctgtactatcccccactgaaaagcatgcactcagagatgcatacaaccacacag
gtctttggctggtttttgaagctgaacccacctggttttctccttcatctgatgcagcaa
gagaaatttggccaggagggggccgttggtgcagaccaagcatccagtgggaacacacag
gggctctttgggactccattaatgagccccggccaccccaagacaagccccgaattaact
ccactgctgaccctgacatggacacctgtaattaggccagcagcagctgaagcagagaag
ccccaggggctccatgggggctgcgtcatcctggaagcaaccacttga

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_5|744_aa
MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG
GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSS
GGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESN
RRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKM
TDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPLPADPLCVHN
SSLFALQNLQPWSDDSTKITSVTSVASACEPAECSGWALTSCVERSEQVLAAAPGLLQVS
RIHRLWHPAPGRAKSRNSLQHLRSRLPLPGQPPSSGTSQGSHSLTAESTCRPEPSARQLS
DPAQLDADSCRRGHSAAPTEEDLTPFPAGLGVGVVLGAGFRFQPCSSGEPTFLWLLREEP
KDPKAGGRGRDSAATQKWELDLGLGHRNPERQPDVLACLGVSPPEEAKHKRSQRSTELLS
CQGTPAWRCQAMRWRQPLAASLKDRGKGKATRAQVLLISVEEKHPGVPVTWKFPVAVLVQ
RKEFPQMPEFRAAITLNGHKGELVPCNCVFQRLCRVPQGSLQPDPSPDATRTGWVLSPEL
NCGDNSPHSTNNLANFHQFQVRIGSLDSGPDISAVPHVGLCNNQPGFSPNVGIVLEPRPS
KAPPPANITYLIFLFSTSPTLSKR

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_5|2235_bp
atggagcacctgggtccgcaccacctccacccgggtcacgcagagcccattagcttcggc
atcgaccagatcctcaacagcccggaccagggtggctgcatgggacccgcctcgcgcctc
caggacggagaatacggccttggctgcttggtcggaggcgcctacacttacggcggcggg
ggctccgcggccgcgacgggggctggaggagcgggggcctatggtactggaggtcccggc
ggccccggaggcccggcaggcggcggcggcgcctgcagcatgggtcctctgaccggctcc
tacaacgtgaacatggccttggcaggcggccccggtcctggcggcggcggcggcagcagc
ggcggtgccggggcactcagcgctgcgggggtaatccgggtgccggcacacaggccgctc
gccggagccgtggcccacccccagcccctggccaccggcttgcccaccgtgccctctgtg
cctgccatgccgggcgtcaacaacctcactggcctcaccttcccctggatggagagtaac
cgcagatacacaaaggacaggttcacaggtcacccctatcagaaccggacgccccccaag
aagaagaagccgcgcacgtccttcacacgcctgcagatctgcgagctggagaagcgcttc
caccgccagaagtacctggcctcggccgagcgcgccgccctggccaaggcgctcaaaatg
accgatgcgcaggtcaaaacctggttccagaaccggcggacaaagtggagacggcagact
gcggaggaacgggaggccgagaggcagcaagcgaaccgcatcctcctgcagttgcagcag
gaggccttccagaagagcctggcacagccgctgcccgctgaccctctgtgcgtgcacaac
tcgtcgctcttcgccctgcagaatctgcagccgtggtctgacgactcgaccaaaatcact
agcgtcacgtcggtggcgtcggcctgcgagcccgcggagtgctcaggttgggccctgacg
agctgtgtggagcgtagtgagcaggttctggcggcagcgccgggtctgctgcaggtctcc
cgcattcaccggctgtggcacccagcgccaggccgcgcaaaatccagaaatagcctccag
cacctcagaagtcgtctccctctacctgggcagcccccatcttcaggaacatcacagggc
tcacactcactaaccgcggagagcacatgcaggccggagccctcagcccggcagctctcg
gaccctgcccagctcgacgcggactcatgcagaagaggacattccgcagcccctacagag
gaggatctaactccattcccagctggcctgggggtgggggttgtcttaggagctggcttc
aggttccagccctgcagctcgggtgaacccacatttctttggttgctgcgagaagagcca
aaagacccaaaagctggaggccgcggccgtgattcagcagccacccagaagtgggagctg
gacctgggacttggtcacagaaacccagaacgacagcctgatgtcctggcttgtcttggg
gtgtcacctccagaagaagccaagcacaaacgttcacagagatccactgagctcctgagc
tgccaagggacacctgcatggaggtgccaggccatgcgctggagacagcccctcgcagcc
tccctgaaggatcggggcaagggcaaggccacgagagctcaggtgctgttaatttccgtt
gaggagaagcaccctggggtccctgtcacttggaaattccctgtggcagtgcttgttcag
aggaaggaattcccccagatgcctgagttcagggctgctatcaccctgaatggccacaag
ggggagctcgtgccctgtaattgtgtgtttcagcgcctgtgccgtgtgccgcaaggatcc
ctgcagccagatccttctcctgatgccaccaggactggatgggtcctcagtcctgaactg
aactgtggtgacaactccccacattccaccaataatcttgccaatttccatcaatttcag
gtccgtattggaagccttgactctggcccagacatttctgctgtacctcatgtaggtctc
tgcaataaccaacctgggttctctcctaatgtggggattgtcctggagcccaggccttcc
aaggctcctccgcccgccaacatcacctacctcatcttcctcttcagcacatccccaaca
ttgtctaagcggtaa

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_6|149_aa
MLKGKAATLKSHMPYLAQLPASGPKESRAQAPQPQRTGSILVSHCQLSSAISLRDQLHIF
GGKVSPARIVRSRPQTLNTERKGFHPGDLETSDARATSASSIQPNGLEHSAPSRGNWEAQ
HPAAAERMAGLVPQTRQPESFENIEISEI

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_6|450_bp
atgctgaaaggaaaggctgccaccctgaagtcgcacatgccctaccttgcccagctcccg
gcgagcggcccgaaggagagcagagcacaggctccacagcctcagagaacaggctcgatt
ctggtctcccactgccaactgtcatctgcgatcagcctcagagatcagttacatatcttt
ggtgggaaagtctctccggcccgaattgtccgctccaggccccagacgctgaacacggaa
cgaaaaggcttccatcctggagacctggagacgagtgacgccagagcgacctcagccagt
tccatccagccaaacggcctggagcactcagcgcccagccgggggaactgggaggcccaa
cacccggctgcagccgagcgcatggctggcctggtaccgcaaacccggcagcccgagagc
tttgaaaacatcgaaatctccgagatttaa

>gi568815588f:101031542_101236910|GENSCAN_predicted_peptide_7|462_aa
XPSTFPPGLSSGPMPGLRPAPPDSSETSVKGRELTTINGFWSDFDVSGPFELSGIGALAS
ALPTAAARTRGQEPLPSHLTPLNSTGVGETGAPRSAPRLRPRIAGSPSSSGARVSALFPG
PRAVLPSSAAALIGPAPGPRPAHAASFPPAAACPRRPAPELPAGWVPAARAAPAGTPNKA
EMTSKEDGKAAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHL
LAAADKHAQGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQR
QTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK
LKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPVLPP
GAPKAPGAGALQLSPASPLTDQPASSQDCSEDEEDEEIDVDD

>gi568815588f:101031542_101236910|GENSCAN_predicted_CDS_7|1389_bp
ngtccttccacctttccacctggcctaagctcaggccccatgcccggcctgcgcccggcg
ccccccgacagtagtgagacctctgtgaaagggagggagctgactaccattaacggtttt
tggtcagactttgatgtttctgggccgtttgagttatccgggatcggcgccctcgcctcg
gctcttccaactgcggccgccaggacccggggccaggagccactgccgagccacctgaca
cctttaaatagcaccggggttggcgaaactggagccccgcgcagcgcgccccggctccgg
ccccggattgctggaagccccagcagcagcggcgcccgcgtcagcgccctcttcccgggg
ccccgcgctgttctcccctcctcagccgccgcgctaatcggccccgcgcccggcccgcgc
cctgcccatgcggcctcctttccacccgccgctgcctgcccgcgccgtccggcgcccgag
ctgcccgcgggctgggtccccgcggcccgagccgccccggccgggaccccgaacaaggcc
gagatgacttccaaggaggacggcaaggcggcgccgggggaggagcggcggcgcagcccg
ctggaccacctgcctccgcctgccaactccaacaagccactgacgccgttcagcatcgag
gacatcctcaacaagccgtctgtgcggagaagttactcgctgtgcggggcggcgcacctg
ctggccgccgcggacaagcacgcgcagggcggcttgcccctggcgggccgcgcgctgctc
tcgcagacctcgccgctgtgcgcgctggaggagctcgccagcaagacgtttaaggggctg
gaggtcagcgttctgcaggcagccgaaggccgcgacggtatgaccatctttgggcagcgg
cagacccctaagaagcggcgaaagtcgcgcacggccttcaccaaccaccagatctatgaa
ttggaaaagcgctttctataccagaagtacctgtcccccgccgatcgcgaccaaatcgcg
cagcagctgggcctcaccaacgcgcaagtcatcacctggttccagaatcggcgcgctaag
ctcaagcgggacctggaggagatgaaggccgacgtagagtccgccaagaaactgggcccc
agcgggcagatggacatcgtggcgctggccgaactcgagcagaactcggaggccacagcc
ggcggtggcggcggctgcggcagggccaagtcgaggcccggctctccggtcctcccccca
ggcgccccgaaggccccgggcgctggcgccctgcagctctcgcctgcctctccgctcacg
gaccagccggccagcagccaggactgctcggaggacgaggaagacgaagagatcgacgtg
gacgattga