Result of FASTA (omim) for pF1KB6424
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6424, 340 aa
  1>>>pF1KB6424 340 - 340 aa - 340 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1491+/-0.000498; mu= 12.3246+/- 0.030
 mean_var=149.1961+/-30.258, 0's: 0 Z-trim(111.9): 433  B-trim: 102 in 1/51
 Lambda= 0.105002
 statistics sampled from 20099 (20676) to 20099 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.242), width:  16
 Scan time:  7.690

The best scores are:                                      opt bits E(85289)
XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2321 364.0 2.6e-100
NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 2321 364.0 2.6e-100
XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 2321 364.0 2.6e-100
XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 2152 338.4 1.3e-92
NP_001269468 (OMIM: 139380,613065,616973) guanine  ( 340) 2152 338.4 1.3e-92
XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 2152 338.4 1.3e-92
NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 2151 338.2 1.5e-92
NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 1960 309.3 7.6e-84
NP_001284500 (OMIM: 139130,145500,617024) guanine  ( 339) 1935 305.5 1.1e-82
XP_011519255 (OMIM: 139130,145500,617024) PREDICTE ( 360) 1739 275.9 9.5e-74
NP_001269467 (OMIM: 139380,613065,616973) guanine  ( 240) 1553 247.5 2.2e-65
NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 1259 203.1 7.2e-52
NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 1259 203.2 7.8e-52
XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 1203 194.7 2.6e-49
XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 1183 191.5 1.9e-48
XP_016877356 (OMIM: 604447) PREDICTED: guanine nuc ( 212)  817 135.9 7.5e-32
NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521)  421 76.4 1.5e-13
NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522)  421 76.4 1.5e-13
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334)  401 73.1 9.3e-13
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334)  401 73.1 9.3e-13
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334)  401 73.1 9.3e-13
NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  391 71.5 2.4e-12
NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279)  391 71.5 2.4e-12
NP_008882 (OMIM: 601787) transcription initiation  ( 800)  387 71.5 7.1e-12
NP_006089 (OMIM: 176981) receptor of activated pro ( 317)  344 64.5 3.6e-10
NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436)  336 63.4   1e-09
NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359)  329 62.3 1.9e-09
NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407)  329 62.3   2e-09
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540)  329 62.5 2.4e-09
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357)  326 61.8 2.6e-09
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589)  329 62.5 2.6e-09
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627)  329 62.6 2.7e-09
XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  329 62.6 2.8e-09
XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  329 62.6 2.8e-09
XP_011530385 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  329 62.6 2.9e-09
XP_011530387 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  329 62.6 2.9e-09
XP_011530386 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  329 62.6 2.9e-09
XP_016863851 (OMIM: 606278) PREDICTED: F-box/WD re ( 707)  329 62.6 2.9e-09
NP_361014 (OMIM: 606278) F-box/WD repeat-containin ( 707)  329 62.6 2.9e-09
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  328 62.4 3.1e-09
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655)  328 62.4 3.1e-09
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655)  328 62.4 3.1e-09
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658)  328 62.4 3.1e-09
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672)  328 62.4 3.1e-09
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672)  328 62.4 3.1e-09
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672)  328 62.4 3.1e-09
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675)  328 62.4 3.1e-09
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675)  328 62.4 3.1e-09


>>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine   (340 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1921.8  bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       ::::::::::::::::::::::::::::::::::::::::
XP_006 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin  (340 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1921.8  bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       ::::::::::::::::::::::::::::::::::::::::
NP_067 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine   (340 aa)
 initn: 2321 init1: 2321 opt: 2321  Z-score: 1921.8  bits: 364.0 E(85289): 2.6e-100
Smith-Waterman score: 2321; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       ::::::::::::::::::::::::::::::::::::::::
XP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
              310       320       330       340

>>XP_016856550 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1783.4  bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>XP_016856549 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1783.4  bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_002065 (OMIM: 139380,613065,616973) guanine nucleot  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1783.4  bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_002 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_002 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_002 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_002 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_002 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :.::::::::::::::::::::::::::::::::::.:::
NP_002 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_001269468 (OMIM: 139380,613065,616973) guanine nucl  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1783.4  bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
NP_001 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_001 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
NP_001 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
NP_001 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
NP_001 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :.::::::::::::::::::::::::::::::::::.:::
NP_001 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>XP_016856548 (OMIM: 139380,613065,616973) PREDICTED: g  (340 aa)
 initn: 2152 init1: 2152 opt: 2152  Z-score: 1783.4  bits: 338.4 E(85289): 1.3e-92
Smith-Waterman score: 2152; 90.9% identity (96.8% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::.:::::::::.:::.:::::: :::: :::.:.: :::::::::::::::::::::
XP_016 MSELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::::::::::::::::: ::::::::::::::.::::::::::::::::::.::::::
XP_016 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       :::.::::::::.:: : :::::::::.::::.:.:::::.:::: :::::. ::::: :
XP_016 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :::::::::::::::::::::. :::::::::::::.:::::::::::::::::::::.:
XP_016 FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :.::::::::::::::::::::::::::::::::::.:::
XP_016 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_005264 (OMIM: 139390) guanine nucleotide-binding pr  (340 aa)
 initn: 2151 init1: 2151 opt: 2151  Z-score: 1782.6  bits: 338.2 E(85289): 1.5e-92
Smith-Waterman score: 2151; 90.0% identity (97.9% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       ::::::::::::::::::.::::::.:.::.:::...: :::::::::::::::::::::
NP_005 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::: ::::::::::::::::::::::::.::::::::::::::::::::.:::::::::
NP_005 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       ::::.:::::::::::::::::::::::::::::.::.:::::::::::::::.:::. :
NP_005 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       .:::::::::::.:: ::::::::::: ::::.::.::::.: :: ::::::.:::::::
NP_005 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       :.::::::::::::::::::::.::::::::::::::::.:::::::::::::::.::..
NP_005 FTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       ::::::::::::::::::::::::::::::::::::.:::
NP_005 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
              310       320       330       340

>>NP_002066 (OMIM: 139130,145500,617024) guanine nucleot  (340 aa)
 initn: 1960 init1: 1960 opt: 1960  Z-score: 1626.3  bits: 309.3 E(85289): 7.6e-84
Smith-Waterman score: 1960; 79.7% identity (95.0% similar) in 340 aa overlap (1-340:1-340)

               10        20        30        40        50        60
pF1KB6 MSELEQLRQEAEQLRNQIQDARKACNDATLVQITSNMDSVGRIQMRTRRTLRGHLAKIYA
       :.:.::::::::::..:: :::::: :.::....:... :::.:::::::::::::::::
NP_002 MGEMEQLRQEAEQLKKQIADARKACADVTLAELVSGLEVVGRVQMRTRRTLRGHLAKIYA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 MHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
       :::. ::.::::::::::::.::::::::.::::::::::::::::::::.::::::::.
NP_002 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 CSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTF
       :::::::.:::::.::::: .:::::::::::::..:::::::::::::::::.:: :.:
NP_002 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 TGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYA
       .::.:: :::..:::.  :.:::::::.::::.:.: :::.:::: :::::. ::::: :
NP_002 VGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 FATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
       . ::::::.::::::::::::. .::..::::::::::: :::::.::::::::::::..
NP_002 ICTGSDDASCRLFDLRADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSM
              250       260       270       280       290       300

              310       320       330       340
pF1KB6 KGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN
       :..:.:.:.:::::::::::: ::::::::::::::.:::
NP_002 KSERVGILSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN
              310       320       330       340




340 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 20:06:06 2016 done: Sat Nov  5 20:06:08 2016
 Total Scan time:  7.690 Total Display time:  0.040

Function used was FASTA [36.3.4 Apr, 2011]
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