GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:01:36

Sequence gi568815578r:46586756_46789414 : 202659 bp : 45.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -    204    199    6                               1.05
 1.11 Term -   1408   1300  109  0  1  102   53    88 0.716   4.68
 1.10 Intr -   2500   2405   96  0  0  115   55    99 0.936   8.42
 1.09 Intr -   5774   5649  126  1  0   89   82    61 0.890   5.39
 1.08 Intr -   9533   9402  132  1  0   40   52   189 0.418  10.26
 1.07 Intr -  13282  13216   67  2  1   79   94    82 0.963   5.86
 1.06 Intr -  13866  13833   34  0  1   53  115    28 0.775  -0.20
 1.05 Intr -  18329  18274   56  0  2   51   93    64 0.526   1.90
 1.04 Intr -  23854  23691  164  0  2   89   94   208 0.975  21.12
 1.03 Intr -  26970  26705  266  0  2  109  110   526 0.716  53.21
 1.02 Intr -  28914  28736  179  1  2   43   -4   181 0.143   4.04
 1.01 Init -  40267  40144  124  1  1   65   57   122 0.722   7.13
 1.00 Prom -  42365  42326   40                              -5.06

 2.05 PlyA -  42743  42738    6                               1.05
 2.04 Term -  53546  53455   92  0  2  117   49    51 0.024   1.98
 2.03 Intr -  56066  56012   55  2  1   96   52    55 0.041   1.25
 2.02 Intr -  64735  64556  180  1  0   98   92   319 0.919  33.36
 2.01 Init -  65432  65397   36  2  0   64   67    14 0.246  -3.09
 2.00 Prom -  68967  68928   40                              -0.96

 3.00 Prom +  76093  76132   40                              -3.16
 3.01 Init +  78120  78191   72  2  0   96   19    67 0.155   1.67
 3.02 Term +  93638  93796  159  1  0   38   48   149 0.170   3.84
 3.03 PlyA +  94577  94582    6                               1.05

 4.03 PlyA -  94946  94941    6                               1.05
 4.02 Term - 100476  99998  479  1  2   73   43   334 0.986  22.40
 4.01 Init - 102659 102377  283  2  1  106   95   433 0.615  43.00
 4.00 Prom - 104341 104302   40                              -6.06

 5.00 Prom + 109377 109416   40                              -6.06
 5.01 Init + 111281 111317   37  1  1   94   81    16 0.093   1.68
 5.02 Intr + 122800 122985  186  2  0  116  106    20 0.443   6.26
 5.03 Intr + 127544 127615   72  0  0   79   59    45 0.106   0.08
 5.04 Intr + 138286 139569 1284  2  0  120  111   798 0.876  72.60
 5.05 Intr + 140109 140231  123  1  0   67   97   157 0.967  15.06
 5.06 Intr + 142598 142733  136  0  1  110   70   144 0.998  14.43
 5.07 Term + 147001 147079   79  1  1  112   55   114 0.995   7.74
 5.08 PlyA + 149396 149401    6                               1.05

 6.04 PlyA - 149426 149421    6                               1.05
 6.03 Term - 157300 156815  486  1  0   76   41   253 0.810  14.10
 6.02 Intr - 160083 159962  122  1  2    3   68    90 0.252  -1.29
 6.01 Init - 165314 164888  427  2  1   57   53   238 0.325  13.67
 6.00 Prom - 171128 171089   40                              -4.06

 7.07 PlyA - 171731 171726    6                               1.05
 7.06 Term - 176438 176346   93  2  0   73   34    93 0.478   0.23
 7.05 Intr - 178121 178083   39  2  0  112   98   -16 0.295   0.22
 7.04 Intr - 181317 181251   67  2  1   43   99    88 0.536   4.31
 7.03 Intr - 189345 189223  123  2  0  102   40    44 0.013   0.70
 7.02 Intr - 195241 195185   57  0  0  107  101     6 0.007   1.80
 7.01 Init - 197145 197063   83  0  2   77   60    70 0.005   3.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 136463 136508   46  1  1   91   94    17 0.937   3.68
S.002 Intr + 197073 197257  185  1  2   84   98    97 0.983   9.81


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_1|450_aa
MKPDNVQQTTMNSVIRDGLPGGETFEVRAEQQGASQPEIEGVNDNPTFPETNNLELPLVS
LFASHITTDLSAKLSDVILEIDREFNYFSLPTTASNGPWWPEGRCLFVILLMAVYWCTEA
LPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKI
LMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLFGQKEVRKDPSQES
EENTGLFNSDAEQTGPGEGCGKLLAFHNFGNGCSAAVRRNGLHTVPTEMQFLASTEAKED
EYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQCDVVNFGSWFIFAFP
LMLLFLLAGWLWISFLYGGLSFRGWRKNKSEIRTNAEDRARAVIREEYQNLGPIKFAEQA
VFILFCMFAILLFTRDPKFIPGWASLFNPG

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_1|1353_bp
atgaagccagataatgtgcagcagaccacaatgaacagtgtgatcagagatggacttcct
ggaggggagacctttgaagtgagggctgaacagcaaggagccagccagccagagatagaa
ggggtaaatgacaaccccaccttccctgagaccaacaacttggaattgcccttggtttct
ctctttgcctcacatatcacaacagatctatcagccaagctgtcagacgtgatcttggaa
attgatcgagaattcaactacttctcactacctacaactgccagcaatgggccctggtgg
ccggaaggccgctgcttgtttgtcatcctgctcatggcggtgtactggtgcacggaggcc
ctgccgctctcagtgacggcgctgctgcccatcgtcctcttccccttcatgggcatcttg
ccctccaacaaggtctgcccccagtacttcctcgacaccaacttcctcttcctcagtggg
ctgatcatggccagcgccattgaggagtggaacctgcaccggcgaatcgccctcaagatc
ctgatgcttgttggagtccagccggccaggctcatcctggggatgatggtgaccacctcg
ttcttgtccatgtggctgagcaacaccgcctccactgccatgatgcttcccattgccaat
gccatcctgaaaagtctctttggccagaaggaggttcgaaaggaccccagccaggagagt
gaagagaacacagggctcttcaactcagatgcagagcaaacggggccaggcgagggctgt
ggcaaactgctggcctttcacaactttggcaatggctgctcagctgctgtgcggagaaac
ggcctacacactgtgcccacggagatgcagtttctcgccagcacagaagcgaaggaggat
gaatatcgtcggaacatctggaagggcttcctcatctccatcccctactcagccagtatt
gggggcacagccacactcacgggcacagcccctaacctcatcctgcttggccagctcaag
agtttctttccgcagtgtgacgtggtgaatttcggctcctggttcattttcgccttccct
cttatgctgttgttcctgttggcaggctggctctggatctccttcctgtacgggggactg
agcttcaggggctggaggaagaataaatctgagataagaaccaatgcagaagatagggct
cgagctgtaattcgggaagaataccagaacctggggcccatcaagtttgccgaacaggct
gttttcatccttttctgcatgtttgccatcctcctcttcacccgggacccgaagttcatc
cctggctgggccagcctcttcaatcctgggtga

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_2|120_aa
MGICCTDYFVIQALSRRRGQAGQSRAGPYRQAIALMAALAAAAKKVWSARRLLVLLFTPL
ALLPVVFALPPKKVADPGHSGNNQRLIREPGPYQPSAQREDFDFHCTQLPYKKVPTPGRL

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_2|363_bp
atggggatttgttgcacagattatttcgtcatccaggctttaagccggcgccggggccag
gcggggcagtcccgggccggcccgtaccgccaggcgatcgcgctgatggcggcgctggca
gcagcggccaagaaggtgtggagcgcgcggcggctgctggtgctgctgttcacgccgctc
gcgctgctgccggtggtcttcgccctcccgcccaagaaagttgctgaccctggacactcc
gggaataatcagaggctaattcgagagccaggaccttaccagccctctgcgcagagagag
gacttcgatttccactgtactcagctcccctacaagaaagtgccgacacctgggaggctg
tag

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_3|76_aa
MTGLSIIKELECRDKVTASQQGLKCSNCSTYLLIWMLVVDMDVRPRSLKEAPIAPEAGRV
VSSQLLWSAPPGINSQ

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_3|231_bp
atgacaggtcttagcatcatcaaggaactggagtgcagagacaaggtcacagccagccag
caaggactcaaatgctccaactgctccacgtacctccttatatggatgcttgtggtggac
atggatgtgcgacccagatcccttaaggaagcacctattgccccagaggcagggagagtg
gtcagcagtcagctcctgtggtcagctcctccagggatcaactcacagtag

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_4|253_aa
MAAARATTPADGEEPAPEAEALAAARERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIK
HRFPKGYRHPALEARLGRRRTVQEARALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSV
TVRDYIQSTMETEKTPQGLSNLAKTIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIV
LIDFGLSFISALPEDKGVDLYVLEKAFLSTHPNTETVFEAFLKSYSTSSKKARPVLKKLD
EVRLRGRKRSMVG

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_4|762_bp
atggcggcggccagagctactacgccggccgatggcgaggagcccgccccggaggctgag
gctctggccgcagcccgggagcggagcagccgcttcttgagcggcctggagctggtgaag
cagggtgccgaggcgcgcgtgttccgtggccgcttccagggccgcgcggcggtgatcaag
caccgcttccccaagggctaccggcacccggcgctggaggcgcggcttggcagacggcgg
acggtgcaggaggcccgggcgctcctccgctgtcgccgcgctggaatatctgccccagtt
gtcttttttgtggactatgcttccaactgcttatatatggaagaaattgaaggctcagtg
actgttcgagattatattcagtccactatggagactgaaaaaactccccagggtctctcc
aacttagccaagacaattgggcaggttttggctcgaatgcacgatgaagacctcattcat
ggtgatctcaccacctccaacatgctcctgaaaccccccctggaacagctgaacattgtg
ctcatagactttgggctgagtttcatttcagcacttccagaggataagggagtagacctc
tatgtcctggagaaggccttcctcagtacccatcccaacactgaaactgtgtttgaagcc
tttctgaagagctactccacctcctccaaaaaggccaggccagtgctaaaaaaattagat
gaagtgcgcctgagaggaagaaagaggtccatggttgggtag

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_5|638_aa
MAEGERGADVPHGLGAWLADVALAALRAGGQGRRDRGGGGPESLSGGSGVGDSGGGCAPG
PSAPPARRRVPLAMGPRNLLIDWIWIMDTTLGLGTEGGGHSPPVLPLCASVSLLGGLTFG
YELAVISGALLPLQLDFGLSCLEQEFLVGSLLLGALLASLVGGFLIDCYGRKQAILGSNL
VLLAGSLTLGLAGSLAWLVLGRAVVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEAGI
TVGILLSYALNYALAGTPWGWRHMFGWATAPAVLQSLSLLFLPAGTDETATHKDLIPLQG
GEAPKLGPGRPRYSFLDLFRARDNMRGRTTVGLGLVLFQQLTGQPNVLCYASTIFSSVGF
HGGSSAVLASVGLGAVKVAATLTAMGLVDRAGRRALLLAGCALMALSVSGIGLVSFAVPM
DSGPSCLAVPNATGQTGLPGDSGLLQDSSLPPIPRTNEDQREPILSTAKKTKPHPRSGDP
SAPPRLALSSALPGPPLPARGHALLRWTALLCLMVFVSAFSFGFGPVTWLVLSEIYPVEI
RGRAFAFCNSFNWAANLFISLSFLDLIGTIGLSWTFLLYGLTAVLGLGFIYLFVPETKGQ
SLAEIDQQFQKRRFTLSFGHRQNSTGIPYSRIEISAAS

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_5|1917_bp
atggcagaaggtgaaaggggagcagacgtgccacatggcctcggggcctggctggccgac
gtggcgttggcggcgctgcgcgcgggagggcagggcaggagggacagaggcgggggcggg
ccggaaagtttgtccggcggcagcggcgttggggactccggcgggggatgcgcgcccggc
ccctcagcgcccccagcacgccgccgagtcccgctcgccatggggcccaggaatttgctg
attgattggatctggatcatggacaccaccctggggctgggcactgagggtggaggccac
tccccacctgtcctgcctttgtgtgcctctgtgtctttgctgggtggcctgacctttggt
tatgaactggcagtcatatcaggtgccctgctgccactgcagcttgactttgggctaagc
tgcttggagcaggagttcctggtgggcagcctgctcctgggggctctcctcgcctccctg
gttggtggcttcctcattgactgctatggcaggaagcaagccatcctcgggagcaacttg
gtgctgctggcaggcagcctgaccctgggcctggctggttccctggcctggctggtcctg
ggccgcgctgtggttggcttcgccatttccctctcctccatggcttgctgtatctacgtg
tcagagctggtggggccacggcagcggggagtgctggtgtccctctatgaggcaggcatc
accgtgggcatcctgctctcctatgccctcaactatgcactggctggtaccccctgggga
tggaggcacatgttcggctgggccactgcacctgctgtcctgcaatccctcagcctcctc
ttcctccctgctggtacagatgagactgcaacacacaaggacctcatcccactccaggga
ggtgaggcccccaagctgggcccggggaggccacggtactcctttctggacctcttcagg
gcacgcgataacatgcgaggccggaccacagtgggcctggggctggtgctcttccagcaa
ctaacagggcagcccaacgtgctgtgctatgcctccaccatcttcagctccgttggtttc
catgggggatcctcagccgtgctggcctctgtggggcttggcgcagtgaaggtggcagct
accctgaccgccatggggctggtggaccgtgcaggccgcagggctctgttgctagctggc
tgtgccctcatggccctgtccgtcagtggcataggcctcgtcagctttgccgtgcccatg
gactcaggcccaagctgtctggctgtgcccaatgccaccgggcagacaggcctccctgga
gactctggcctgctgcaggactcctctctacctcccattccaaggaccaatgaggaccaa
agggagccaatcttgtccactgctaagaaaaccaagccccatcccagatctggagacccc
tcagcccctcctcggctggccctgagctctgccctccctgggccccctctgcccgctcgg
gggcatgcactgctgcgctggaccgcactgctgtgcctgatggtctttgtcagtgccttc
tcctttgggtttgggccagtgacctggcttgtcctcagcgagatctaccctgtggagata
cgaggaagagccttcgccttctgcaacagcttcaactgggcggccaacctcttcatcagc
ctctccttcctcgatctcattggcaccatcggcttgtcctggaccttcctgctctacgga
ctgaccgctgtcctcggcctgggcttcatctatttatttgttcctgaaacaaaaggccag
tcgttggcagagatagaccagcagttccagaagagacggttcaccctgagctttggccac
aggcagaactccactggcatcccgtacagccgcatcgagatctctgcggcctcctga

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_6|344_aa
MGGVPEEQIRKSYQLRGEWKWMASKQQMPASVTPPLTESLWDSLKCMSDTVRKRQENEKK
TWMFSIFELMQAGDNSCQSCKAEHPEKWNRRIQAPVEGINESRGVWMGLFLSSVWLKLQT
PGVTQWVASTLPSTSAGIAKSNGSDGDDGDGGDDEKGQILQSLQDLLTDWMWECKRGVRG
DCELLSQFSFVPENPMILDQVMTKTTNKTPGEHEGRATLQGTSRSDSLSGSVVTSDSPIW
GGVQAELDTGCSVATGNVQSDFQHLFPLLLPTCLMVSTSSPLSHRVWGDWPLYWVEQCHK
LHVYLAPVNVTLFGNKILADVIKSHWIRVGPPSNDLGLYKKREM

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_6|1035_bp
atgggtggggtccctgaggagcagatccgtaagagctatcagcttagaggcgaatggaag
tggatggcgtccaagcaacagatgcccgcttctgtgactccaccccttacggaaagtcta
tgggactctctgaaatgtatgagtgatactgttagaaagcggcaagaaaatgaaaagaaa
acgtggatgttttccatatttgagttgatgcaggctggagacaacagctgccagagctgc
aaggcagaacaccctgagaagtggaaccggaggatccaggcgcctgttgaagggataaat
gagagccgtggcgtgtggatgggactctttctgtcttccgtttggctgaagctccaaacg
ccaggagtaacccagtgggtagcaagcacccttccctccacctctgcaggaattgcaaaa
agcaatgggagtgatggtgatgatggtgatggaggagatgatgagaaaggtcaaattctg
cagagcctgcaggatttgctaacagattggatgtgggagtgcaaaagaggagttaggggt
gactgcgagctcctctcgcagttcagttttgtgcccgagaaccccatgatcctcgatcag
gtcatgaccaagaccacaaataaaacccctggtgaacacgagggcagggccacactgcag
ggcaccagccggagtgacagcctgtctggctcggtagtgactagtgactcccccatctgg
gggggtgtgcaagcggagctggacacaggatgcagtgtggccacgggaaatgtgcagagt
gatttccagcatctctttcctcttctcttgccaacttgccttatggtgtccacttcttcc
ccactcagccatagggtctggggtgattggcccctgtactgggttgaacagtgtcataaa
cttcatgtctacctggcccctgtgaatgtgactttatttggaaataagattttggcagat
gtaatcaagtcacactggattcgggtgggccctccatccaatgacttgggtctttataag
aagagggaaatgtaa

>gi568815578r:46586756_46789414|GENSCAN_predicted_peptide_7|153_aa
MAKTLGLMLIGDGKPLMLIADGMLTVEGWDHLVAGKQARAPTDSTLCCTDEVGTDILILI
SNDYASWSQLIGPKWTNQSPSLGMWNVTSLSAKRNQSTPTHGSLLVEPMQRTTLQLKITC
SGKVLGRYVNCISSCELLSKDRKALLWITFCAF

>gi568815578r:46586756_46789414|GENSCAN_predicted_CDS_7|462_bp
atggcaaagaccttaggattgatgctgattggagatgggaagccattgatgctgattgca
gatgggatgctgactgtagagggatgggaccatctagttgcaggaaaacaagctcgggct
cccactgattctacattatgctgcacagatgaagtgggaacagatatattaatacttata
tccaatgactatgcttcctggtcacagttgattggtccaaagtggaccaatcagagtcct
tccctgggaatgtggaatgtgacgtcactatcggccaaacgcaaccagagcacacccacc
catgggagcctgttggtggagcccatgcagaggacaactctccagttaaaaatcacttgc
tcagggaaggtactgggtcgctatgtcaactgtatttcttcttgtgagctgctgtcaaaa
gatcggaaagctctgctctggatcaccttctgtgccttctga