Result of FASTA (ccds) for pF1KB6582
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6582, 404 aa
  1>>>pF1KB6582 404 - 404 aa - 404 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.5935+/-0.00084; mu= 13.1046+/- 0.051
 mean_var=120.6550+/-24.175, 0's: 0 Z-trim(111.3): 16  B-trim: 396 in 1/51
 Lambda= 0.116762
 statistics sampled from 12293 (12307) to 12293 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.378), width:  16
 Scan time:  3.170

The best scores are:                                      opt bits E(32554)
CCDS2778.1 PRKAR2A gene_id:5576|Hs108|chr3         ( 404) 2662 459.1 3.3e-129
CCDS82771.1 PRKAR2A gene_id:5576|Hs108|chr3        ( 382) 1921 334.3 1.2e-91
CCDS5740.1 PRKAR2B gene_id:5577|Hs108|chr7         ( 418) 1601 280.4 2.2e-75
CCDS11678.1 PRKAR1A gene_id:5573|Hs108|chr17       ( 381)  777 141.5 1.2e-33
CCDS34579.1 PRKAR1B gene_id:5575|Hs108|chr7        ( 381)  771 140.5 2.5e-33
CCDS62307.1 PRKAR1A gene_id:5573|Hs108|chr17       ( 337)  589 109.8 3.8e-24
CCDS64005.1 PRKG2 gene_id:5593|Hs108|chr4          ( 733)  468 89.7 9.5e-18
CCDS3589.1 PRKG2 gene_id:5593|Hs108|chr4           ( 762)  468 89.7 9.8e-18
CCDS7244.1 PRKG1 gene_id:5592|Hs108|chr10          ( 686)  456 87.7 3.7e-17
CCDS44399.1 PRKG1 gene_id:5592|Hs108|chr10         ( 671)  445 85.8 1.3e-16


>>CCDS2778.1 PRKAR2A gene_id:5576|Hs108|chr3              (404 aa)
 initn: 2662 init1: 2662 opt: 2662  Z-score: 2433.1  bits: 459.1 E(32554): 3.3e-129
Smith-Waterman score: 2662; 100.0% identity (100.0% similar) in 404 aa overlap (1-404:1-404)

               10        20        30        40        50        60
pF1KB6 MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPAATPRQSLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPAATPRQSLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 HPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 PKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 RGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRVTFRRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 RGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRVTFRRI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 IVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKADSFYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 IVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKADSFYI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 IESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS27 IESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCL
              310       320       330       340       350       360

              370       380       390       400    
pF1KB6 VMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS27 VMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ
              370       380       390       400    

>>CCDS82771.1 PRKAR2A gene_id:5576|Hs108|chr3             (382 aa)
 initn: 1921 init1: 1921 opt: 1921  Z-score: 1758.8  bits: 334.3 E(32554): 1.2e-91
Smith-Waterman score: 2475; 94.6% identity (94.6% similar) in 404 aa overlap (1-404:1-382)

               10        20        30        40        50        60
pF1KB6 MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPAATPRQSLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLREARAPASVLPAATPRQSLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 HPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 HPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 RGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRVTFRRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVATSEGSLWGLDRVTFRRI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 IVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKADSFYI
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
CCDS82 IVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQ---------
              250       260       270       280       290          

              310       320       330       340       350       360
pF1KB6 IESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCL
                    :::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 -------------TKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCL
                          300       310       320       330        

              370       380       390       400    
pF1KB6 VMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ
      340       350       360       370       380  

>>CCDS5740.1 PRKAR2B gene_id:5577|Hs108|chr7              (418 aa)
 initn: 1767 init1: 1187 opt: 1601  Z-score: 1467.0  bits: 280.4 E(32554): 2.2e-75
Smith-Waterman score: 1759; 66.7% identity (84.0% similar) in 412 aa overlap (4-399:3-413)

               10        20        30        40           50       
pF1KB6 MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR---EARAPASVLPAATPRQ
          :.:: ::::::::.::::::.:: ::.:::...::::.   : .. :     .    
CCDS57  MSIEIPAGLTELLQGFTVEVLRHQPADLLEFALQHFTRLQQENERKGTARFGHEGRTWG
                10        20        30        40        50         

        60            70         80                90       100    
pF1KB6 SLGHPP----PEPGPDRVADA-KGDSESEEDED--------LEVPVPSRFNRRVSVCAET
       .::       :  : . . .  ..:::. :.:.        ...:: .::.::.:::::.
CCDS57 DLGAAAGGGTPSKGVNFAEEPMQSDSEDGEEEEAAPADAGAFNAPVINRFTRRASVCAEA
      60        70        80        90       100       110         

          110       120       130       140       150       160    
pF1KB6 YNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADE
       :::::::.:.. :.::::::.:: :::::::::::::::: ::.:::::::::..::  :
CCDS57 YNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKDGE
     120       130       140       150       160       170         

          170       180       190       200       210       220    
pF1KB6 HVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATIVAT
       :::::::::::::::.:::.:: :  :.  : ::.::::::::::::::::::::::.::
CCDS57 HVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITAT
     180       190       200       210       220       230         

          230       240       250       260       270       280    
pF1KB6 SEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKD
       : :.:::::::::::::::::::::::.::::::.:.::::: :::.:.::::: :.:.:
CCDS57 SPGALWGLDRVTFRRIIVKNNAKKRKMYESFIESLPFLKSLEFSERLKVVDVIGTKVYND
     240       250       260       270       280       290         

          290       300       310       320       330       340    
pF1KB6 GERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTN
       ::.::.::..::::.:.:::::.: .. . ::. .  :  :::::: .::::::::::::
CCDS57 GEQIIAQGDSADSFFIVESGEVKITMKRKGKSEVEE-NGAVEIARCSRGQYFGELALVTN
     300       310       320       330        340       350        

          350       360       370       380       390       400    
pF1KB6 KPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ
       :::::::.:.: ::::.::::::::::::::.::::::. :::::: .::...:.     
CCDS57 KPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEEQLVALFGTNMDIVEPTA
      360       370       380       390       400       410        

>>CCDS11678.1 PRKAR1A gene_id:5573|Hs108|chr17            (381 aa)
 initn: 892 init1: 350 opt: 777  Z-score: 717.4  bits: 141.5 E(32554): 1.2e-33
Smith-Waterman score: 790; 39.6% identity (65.2% similar) in 379 aa overlap (13-385:30-373)

                                10        20        30        40   
pF1KB6                  MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR--
                                    ::.   :..   .:   . :  ::: ::.  
CCDS11 MESGSTAASEEARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKE
               10        20        30        40        50        60

              50           60        70        80        90        
pF1KB6 EARAPASVLPAAT---PRQSLGHPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRV
       ::.   ..  :.:    :..   ::: :.:     .::                   :: 
CCDS11 EAKQIQNLQKAGTRTDSREDEISPPP-PNPV----VKGRR-----------------RRG
               70        80         90                             

      100       110       120       130       140       150        
pF1KB6 SVCAETYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFER
       .. ::.:.  ::.  .  : . ::  .    : .: .  .::..::... :...::::  
CCDS11 AISAEVYT--EEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFSV
      100         110       120       130       140       150      

      160       170       180       190       200       210        
pF1KB6 IVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRA
          : : ::.:::.:::::::..:  :. :...  : :::.    ::::::::.:.::::
CCDS11 SFIAGETVIQQGDEGDNFYVIDQGETDVYVNNEWAT-SVGEG---GSFGELALIYGTPRA
        160       170       180       190           200       210  

      220       230       240       250       260       270        
pF1KB6 ATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIG
       ::. : .. .:::.:: ..:::.. .. .::::.: :. .: .:.::.  ::. ..:.. 
CCDS11 ATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALE
            220       230       240       250       260       270  

      280       290       300       310       320        330       
pF1KB6 EKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQE-VEIARCHKGQYFG
          ..::..:..::: .: :.::  : ...: : :..      :.: ::..:   ..:::
CCDS11 PVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQR-RSE------NEEFVEVGRLGPSDYFG
            280       290       300              310       320     

       340       350       360       370       380       390       
pF1KB6 ELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSV
       :.::. :.::::.. : : .::. .:   :::.:::: ::.::::..:            
CCDS11 EIALLMNRPRAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQYNSFVSLSV    
         330       340       350       360       370       380     

       400    
pF1KB6 DLGNLGQ

>>CCDS34579.1 PRKAR1B gene_id:5575|Hs108|chr7             (381 aa)
 initn: 858 init1: 371 opt: 771  Z-score: 711.9  bits: 140.5 E(32554): 2.5e-33
Smith-Waterman score: 776; 37.0% identity (66.4% similar) in 384 aa overlap (3-385:21-373)

                                 10        20        30        40  
pF1KB6                   MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLRE
                           ..:.  :. ..:.   :..  ..:   ..:  :.: .:..
CCDS34 MASPPACPSEEDESLKGCELYVQLH-GIQQVLKDCIVHLCISKPERPMKFLREHFEKLEK
               10        20         30        40        50         

             50        60        70        80         90       100 
pF1KB6 ARAPASVLPAATPRQSLGHPPPEPGPDRVADAKGDSESEE-DEDLEVPVPSRFNRRVSVC
        .           :: :..          .....::..:: .     :: .   :: .: 
CCDS34 EEN----------RQILARQK--------SNSQSDSHDEEVSPTPPNPVVKARRRRGGVS
      60                  70                80        90       100 

             110       120       130       140       150       160 
pF1KB6 AETYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVK
       ::.:.  ::.  .  : . ::  .    : .: .  .:: .::... :...::::     
CCDS34 AEVYT--EEDAVSYVRKVIPKDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHI
               110       120       130       140       150         

             170       180       190       200       210       220 
pF1KB6 ADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRAATI
       : : ::.::..::::::...:  :. :. .     : . .. ::::::::.:.::::::.
CCDS34 AGETVIQQGNEGDNFYVVDQGEVDVYVNGEW----VTNISEGGSFGELALIYGTPRAATV
     160       170       180       190           200       210     

             230       240       250       260       270       280 
pF1KB6 VATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKI
        : .. .:::.:: ..:::.. .. .::::.: :. .: .:.:::  ::. ..:..    
CCDS34 KAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQ
         220       230       240       250       260       270     

             290       300       310       320       330       340 
pF1KB6 YKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELAL
       ..:::.:..::: .:.::::  : .:.: :      .. ... ::..:   ..::::.::
CCDS34 FEDGEKIVVQGEPGDDFYIITEGTASVLQR------RSPNEEYVEVGRLGPSDYFGEIAL
         280       290       300             310       320         

             350       360       370       380       390       400 
pF1KB6 VTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGN
       . :.::::.. : : .::. .:   :::.:::: .:.::::..:                
CCDS34 LLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNIQRYNSFISLTV        
     330       340       350       360       370       380         

          
pF1KB6 LGQ

>>CCDS62307.1 PRKAR1A gene_id:5573|Hs108|chr17            (337 aa)
 initn: 692 init1: 350 opt: 589  Z-score: 546.9  bits: 109.8 E(32554): 3.8e-24
Smith-Waterman score: 602; 37.0% identity (63.0% similar) in 335 aa overlap (13-341:30-329)

                                10        20        30        40   
pF1KB6                  MSHIQIPPGLTELLQGYTVEVLRQQPPDLVEFAVEYFTRLR--
                                    ::.   :..   .:   . :  ::: ::.  
CCDS62 MESGSTAASEEARSLRECELYVQKHNIQALLKDSIVQLCTARPERPMAFLREYFERLEKE
               10        20        30        40        50        60

              50           60        70        80        90        
pF1KB6 EARAPASVLPAAT---PRQSLGHPPPEPGPDRVADAKGDSESEEDEDLEVPVPSRFNRRV
       ::.   ..  :.:    :..   ::: :.:     .::                   :: 
CCDS62 EAKQIQNLQKAGTRTDSREDEISPPP-PNPV----VKGR-----------------RRRG
               70        80         90                             

      100       110       120       130       140       150        
pF1KB6 SVCAETYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQEQLSQVLDAMFER
       .. ::.:.  ::.  .  : . ::  .    : .: .  .::..::... :...::::  
CCDS62 AISAEVYT--EEDAASYVRKVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFSV
      100         110       120       130       140       150      

      160       170       180       190       200       210        
pF1KB6 IVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGSFGELALMYNTPRA
          : : ::.:::.:::::::..:  :. :...  : :::.    ::::::::.:.::::
CCDS62 SFIAGETVIQQGDEGDNFYVIDQGETDVYVNNEWAT-SVGEG---GSFGELALIYGTPRA
        160       170       180       190           200       210  

      220       230       240       250       260       270        
pF1KB6 ATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIG
       ::. : .. .:::.:: ..:::.. .. .::::.: :. .: .:.::.  ::. ..:.. 
CCDS62 ATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLSKVSILESLDKWERLTVADALE
            220       230       240       250       260       270  

      280       290       300       310       320        330       
pF1KB6 EKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQE-VEIARCHKGQYFG
          ..::..:..::: .: :.::  : ...: : :..      :.: ::..:   ..:::
CCDS62 PVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQR-RSE------NEEFVEVGRLGPSDYFG
            280       290       300              310       320     

       340       350       360       370       380       390       
pF1KB6 ELALVTNKPRAASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSV
       .: .                                                        
CCDS62 HLIISRRSIPLG                                                
         330                                                       

>>CCDS64005.1 PRKG2 gene_id:5593|Hs108|chr4               (733 aa)
 initn: 392 init1: 248 opt: 468  Z-score: 432.1  bits: 89.7 E(32554): 9.5e-18
Smith-Waterman score: 468; 28.0% identity (62.8% similar) in 325 aa overlap (60-379:90-399)

      30        40        50        60        70        80         
pF1KB6 VEFAVEYFTRLREARAPASVLPAATPRQSLGHPPPEPGPDRVADAKGDSESEEDEDLEVP
                                     :  : . .::.:       : ..  .  : 
CCDS64 KQTVAIAELTEELQNKCIQLNKLQDVVHMQGGSPLQASPDKVP-----LEVHRKTSGLVS
      60        70        80        90       100            110    

      90       100           110       120       130       140     
pF1KB6 VPSRFNRRVSVCAE----TYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQ
       . :: . ...: ::    ::. ..  : .  ..   : . ..  . .: .   ..: :: 
CCDS64 LHSRRGAKAGVSAEPTTRTYDLNKPPEFSFEKARVRKDSSEKKLITDALNKNQFLKRLDP
          120       130       140       150       160       170    

         150       160       170       180       190       200     
pF1KB6 EQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGS
       .:...... :. :  .   ..: ::. :....:. .:  ...   ..   :. ..    .
CCDS64 QQIKDMVECMYGRNYQQGSYIIKQGEPGNHIFVLAEGRLEVF-QGEKLLSSIPMWT---T
          180       190       200       210        220          230

         210       220       230       240       250       260     
pF1KB6 FGELALMYNTPRAATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSL
       :::::..::  :.:.. : .. . :.::: .:. :. ..   . .....:..:: :::.:
CCDS64 FGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTAQARDEQYRNFLRSVSLLKNL
              240       250       260       270       280       290

         270       280       290       300       310       320     
pF1KB6 EVSERMKIVDVIGEKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEV
         ..  ::.: .  . :  :. :: .::....:.:. .:.:..     :.:. .: .:  
CCDS64 PEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKV-----TQST-EGHDQPQ
              300       310       320       330             340    

         330       340       350        360       370       380    
pF1KB6 EIARCHKGQYFGELALVTNKPRAASAYAV-GDVKCLVMDVQAFERLLGPCMDIMKRNISH
        :   .::.:::: ::...  :.:.  :  .:: :::.: ..:.. .:   ...:     
CCDS64 LIKTLQKGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFEELQKYLEGY
          350       360       370       380       390       400    

          390       400                                            
pF1KB6 YEEQLVKMFGSSVDLGNLGQ                                        
                                                                   
CCDS64 VANLNRDDEKRHAKRSMSNWKLSKALSLEMIQLKEKVKVKNENVAFAMKCIRKKHIVDTK
          410       420       430       440       450       460    

>>CCDS3589.1 PRKG2 gene_id:5593|Hs108|chr4                (762 aa)
 initn: 392 init1: 248 opt: 468  Z-score: 431.9  bits: 89.7 E(32554): 9.8e-18
Smith-Waterman score: 468; 28.0% identity (62.8% similar) in 325 aa overlap (60-379:90-399)

      30        40        50        60        70        80         
pF1KB6 VEFAVEYFTRLREARAPASVLPAATPRQSLGHPPPEPGPDRVADAKGDSESEEDEDLEVP
                                     :  : . .::.:       : ..  .  : 
CCDS35 KQTVAIAELTEELQNKCIQLNKLQDVVHMQGGSPLQASPDKVP-----LEVHRKTSGLVS
      60        70        80        90       100            110    

      90       100           110       120       130       140     
pF1KB6 VPSRFNRRVSVCAE----TYNPDEEEEDTDPRVIHPKTDEQRCRLQEACKDILLFKNLDQ
       . :: . ...: ::    ::. ..  : .  ..   : . ..  . .: .   ..: :: 
CCDS35 LHSRRGAKAGVSAEPTTRTYDLNKPPEFSFEKARVRKDSSEKKLITDALNKNQFLKRLDP
          120       130       140       150       160       170    

         150       160       170       180       190       200     
pF1KB6 EQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIERGTYDILVTKDNQTRSVGQYDNRGS
       .:...... :. :  .   ..: ::. :....:. .:  ...   ..   :. ..    .
CCDS35 QQIKDMVECMYGRNYQQGSYIIKQGEPGNHIFVLAEGRLEVF-QGEKLLSSIPMWT---T
          180       190       200       210        220          230

         210       220       230       240       250       260     
pF1KB6 FGELALMYNTPRAATIVATSEGSLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSL
       :::::..::  :.:.. : .. . :.::: .:. :. ..   . .....:..:: :::.:
CCDS35 FGELAILYNCTRTASVKAITNVKTWALDREVFQNIMRRTAQARDEQYRNFLRSVSLLKNL
              240       250       260       270       280       290

         270       280       290       300       310       320     
pF1KB6 EVSERMKIVDVIGEKIYKDGERIITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEV
         ..  ::.: .  . :  :. :: .::....:.:. .:.:..     :.:. .: .:  
CCDS35 PEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKV-----TQST-EGHDQPQ
              300       310       320       330             340    

         330       340       350        360       370       380    
pF1KB6 EIARCHKGQYFGELALVTNKPRAASAYAV-GDVKCLVMDVQAFERLLGPCMDIMKRNISH
        :   .::.:::: ::...  :.:.  :  .:: :::.: ..:.. .:   ...:     
CCDS35 LIKTLQKGEYFGEKALISDDVRSANIIAEENDVACLVIDRETFNQTVGTFEELQKYLEGY
          350       360       370       380       390       400    

          390       400                                            
pF1KB6 YEEQLVKMFGSSVDLGNLGQ                                        
                                                                   
CCDS35 VANLNRDDEKRHAKRSMSNWKLSKALSLEMIQLKEKVARFSSSSPFQNLEIIATLGVGGF
          410       420       430       440       450       460    

>>CCDS7244.1 PRKG1 gene_id:5592|Hs108|chr10               (686 aa)
 initn: 467 init1: 260 opt: 456  Z-score: 421.6  bits: 87.7 E(32554): 3.7e-17
Smith-Waterman score: 456; 31.2% identity (61.4% similar) in 295 aa overlap (96-388:75-357)

          70        80        90       100       110       120     
pF1KB6 PGPDRVADAKGDSESEEDEDLEVPVPSRFNRRVSVCAETYNPDEEEEDTDPRVIHPKTDE
                                     .: .. ::    : .. .     ..::. .
CCDS72 ELDKYRSVIRPATQQAQKQSASTLQGEPRTKRQAISAEPTAFDIQDLSHVTLPFYPKSPQ
           50        60        70        80        90       100    

         130       140       150       160       170       180     
pF1KB6 QRCRLQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQGDDGDNFYVIERGTYD
       ..  ..::  :  ..:::.  :.....: :.      :  .: .:: :.  ::.: :   
CCDS72 SKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGK--
          110       120       130       140       150       160    

         190        200        210       220       230       240   
pF1KB6 ILVTKDN-QTRSVGQYDNRGS-FGELALMYNTPRAATIVATSEGSLWGLDRVTFRRIIVK
       . :::.. .  ..:     :. :::::..::  :.::. .  . .::..::  :. :...
CCDS72 VEVTKEGVKLCTMGP----GKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMR
            170           180       190       200       210        

           250       260       270       280       290       300   
pF1KB6 NNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGERIITQGEKADSFYIIES
       ..  :.  .  :..::: ..::      :..::. :  :..:: :: :: ..:.:.:: .
CCDS72 TGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISK
      220       230       240       250       260       270        

           310       320       330       340       350       360   
pF1KB6 GEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPRAASAYAVGDVKCLVMD
       : :..   .:  : ..   . : .    ::..::: ::  .  :.:.. :.  : :::.:
CCDS72 GTVNV---TREDSPSE---DPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVID
      280          290          300       310       320       330  

           370       380       390       400                       
pF1KB6 VQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ                   
        ..:..:.:   :. ..     : .                                   
CCDS72 RDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFNIIDTLGVGGFGRVELV
            340       350       360       370       380       390  

>>CCDS44399.1 PRKG1 gene_id:5592|Hs108|chr10              (671 aa)
 initn: 446 init1: 260 opt: 445  Z-score: 411.7  bits: 85.8 E(32554): 1.3e-16
Smith-Waterman score: 445; 32.2% identity (59.5% similar) in 311 aa overlap (88-388:47-342)

        60        70        80        90            100       110  
pF1KB6 SLGHPPPEPGPDRVADAKGDSESEEDEDLEVPVPS-----RFNRRVSVCAETYNPDEEEE
                                     .::::     : .:  .. ::   :.  . 
CCDS44 ERIKELEKRLSEKEEEIQELKRKLHKCQSVLPVPSTHIGPRTTRAQGISAE---PQTYRS
         20        30        40        50        60           70   

            120          130       140       150       160         
pF1KB6 DTDPRVIHPK-TDEQRCR--LQEACKDILLFKNLDQEQLSQVLDAMFERIVKADEHVIDQ
         : :    : :  .: .  ..::  :  ..:::.  :.....: :.      :  .: .
CCDS44 FHDLRQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKE
            80        90       100       110       120       130   

     170       180       190        200        210       220       
pF1KB6 GDDGDNFYVIERGTYDILVTKDN-QTRSVGQYDNRGS-FGELALMYNTPRAATIVATSEG
       :: :.  ::.: :   . :::.. .  ..:     :. :::::..::  :.::. .  . 
CCDS44 GDVGSLVYVMEDG--KVEVTKEGVKLCTMGP----GKVFGELAILYNCTRTATVKTLVNV
           140         150       160           170       180       

       230       240       250       260       270       280       
pF1KB6 SLWGLDRVTFRRIIVKNNAKKRKMFESFIESVPLLKSLEVSERMKIVDVIGEKIYKDGER
       .::..::  :. :.....  :.  .  :..::: ..::      :..::. :  :..:: 
CCDS44 KLWAIDRQCFQTIMMRTGLIKHTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEY
       190       200       210       220       230       240       

       290       300       310       320       330       340       
pF1KB6 IITQGEKADSFYIIESGEVSILIRSRTKSNKDGGNQEVEIARCHKGQYFGELALVTNKPR
       :: :: ..:.:.:: .: :..   .:  : ..   . : .    ::..::: ::  .  :
CCDS44 IIRQGARGDTFFIISKGTVNV---TREDSPSE---DPVFLRTLGKGDWFGEKALQGEDVR
       250       260          270          280       290       300 

       350       360       370       380       390       400       
pF1KB6 AASAYAVGDVKCLVMDVQAFERLLGPCMDIMKRNISHYEEQLVKMFGSSVDLGNLGQ   
       .:.. :.  : :::.: ..:..:.:   :. ..     : .                   
CCDS44 TANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKAKYEAEAAFFANLKLSDFN
             310       320       330       340       350       360 

CCDS44 IIDTLGVGGFGRVELVQLKSEESKTFAMKILKKRHIVDTRQQEHIRSEKQIMQGAHSDFI
             370       380       390       400       410       420 




404 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 23:21:21 2016 done: Fri Nov  4 23:21:21 2016
 Total Scan time:  3.170 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com