GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:13:07

Sequence gi568815596r:127748110_127958100 : 209991 bp : 44.36% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -  15050  14953   98  1  2   67   94    58 0.887   3.95
 1.04 Intr -  16870  16719  152  1  2  105   15   143 0.996   7.66
 1.03 Intr -  17160  17065   96  0  0  106   95    14 0.944   4.11
 1.02 Intr -  20892  20824   69  0  0   65   95    43 0.802   2.08
 1.01 Init -  22872  22669  204  0  0  100   99   127 0.993  13.85
 1.00 Prom -  36602  36563   40                              -3.06

 2.00 Prom +  43541  43580   40                              -3.26
 2.01 Init +  46207  46209    3  0  0   98   53     0 0.068  -2.50
 2.02 Intr +  57477  57681  205  2  1   32   80   187 0.515  11.07
 2.03 Intr +  63019  63150  132  2  0   64   66    82 0.400   4.22
 2.04 Intr +  70545  70575   31  1  1   87   68    14 0.002  -3.51
 2.05 Intr +  84643  85108  466  1  1   66   44   216 0.151   8.13
 2.06 Term +  93740  93859  120  1  0   59   48   124 0.395   3.97
 2.07 PlyA +  94207  94212    6                               1.05

 3.04 PlyA -  95464  95459    6                               1.05
 3.03 Term - 100076  99998   79  1  1   80   33   146 0.626   5.54
 3.02 Intr - 104996 104816  181  0  1   29   95   225 0.789  16.23
 3.01 Init - 109991 109919   73  2  1  107   53    35 0.758   3.18
 3.00 Prom - 114717 114678   40                              -6.86

 4.08 PlyA - 115128 115123    6                               1.05
 4.07 Term - 117096 116985  112  2  1  117   47    81 0.973   4.93
 4.06 Intr - 118887 118791   97  1  1  131  115    69 0.999  12.97
 4.05 Intr - 119170 119036  135  2  0   66   98    26 0.739   1.94
 4.04 Intr - 121435 121345   91  1  1   86  113    99 0.946  11.77
 4.03 Intr - 122819 122705  115  1  1  103   78    97 0.999  10.65
 4.02 Intr - 123250 123140  111  0  0   51   95    97 0.986   6.19
 4.01 Init - 126125 125719  407  2  2   61   75   371 0.999  29.16
 4.00 Prom - 150964 150925   40                              -1.86

 5.03 PlyA - 151461 151456    6                               1.05
 5.02 Term - 158103 158035   69  0  0   95   42    38 0.269  -2.16
 5.01 Init - 167932 167729  204  1  0   41   12   202 0.511   6.75
 5.00 Prom - 185275 185236   40                              -3.56

 6.07 PlyA - 186057 186052    6                               1.05
 6.06 Term - 194055 193897  159  0  0  118   41   118 0.993   8.04
 6.05 Intr - 194428 194315  114  1  0  112   36    38 0.756   1.64
 6.04 Intr - 197450 197347  104  0  2   56   82    62 0.993   2.29
 6.03 Intr - 201885 201760  126  1  0   89   96    50 0.987   6.55
 6.02 Intr - 202299 202051  249  1  0   55   23   244 0.746  12.01
 6.01 Intr - 207235 206877  359  0  2   89  119   248 0.960  22.90

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_1|207_aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDWTPEGRRLVTGASSGEFTLWNGLTFNFET
ILQAHDSPVRAMTWSHNDMWMLTADHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDN
KFATCSDDGTVRIWDFLRCHEERILRX

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_1|621_bp
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccagcaccag
gcacctcgacagctgttttataagcgacctgattttgcacaacagcaagcaatgcaacag
cttacttttgatggaaaacgaatgagaaaagctgtgaaccgaaaaaccatagactacaat
ccatctgtaattaagtatttggagaacagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattacaatgattggactccagaaggaagacgcttggtc
actggagcttctagtggggagtttaccctgtggaatggactcactttcaattttgaaaca
atattacaggctcacgacagcccagtgagggccatgacgtggtcacataatgacatgtgg
atgttgacagcagaccacggaggatatgtgaaatattggcagtcgaacatgaacaacgtc
aagatgttccaggcacataaggaggcgattagagaggccagtttctcacccacggataat
aaatttgctacatgctctgatgacggcactgttagaatctgggactttcttcgttgccat
gaggaaagaattctccgagnn

>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_2|318_aa
MSQEGAAGARSGLKGGKKNPLKLPKKQAKKMNKAFKQKQEKERKKHKELKAKASWKGLRP
QVEFKNLAERAAAIFPYGPPNARSGVITHWRDGATSRAPGPRASVRFDLRMCLVFCGCET
MNLRLMKACRTGYSHHADDLLNSGMDTFMGNNSWNGTVQTSTLAKGGAYLEQRNTLGTSP
LAAELQEVLGPVVLMQDKAVGPVAPPDPGPSPFKEGCPPIPDDAWYTDGSSWGATAPWVA
VTVHPSTDTIWFDTRCGQSSQWAELKAVWMVNTKEVTPMNLGDRRLINVPVITAALVGIV
HLAEILFDLSALQVIVGS

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_2|957_bp
atgagtcaggaaggggcagcaggtgccaggtccggcctcaaaggtggcaagaagaaccct
ttgaaactgcccaaaaagcaggccaagaagatgaataaggctttcaagcagaaacaagaa
aaggaacgaaagaaacacaaggagctaaaagcgaaagcctcctggaaggggctccggcca
caggtggaatttaaaaatctggcagaaagagcagccgccatcttcccctatgggccaccg
aacgcacgctctggggtcatcacgcactggcgggacggcgctacgtcacgcgcgcctgga
ccgcgggcctctgtgaggttcgatctgcgcatgtgcctagtgttctgtggctgtgagaca
atgaatctcaggcttatgaaagcatgcaggacgggctacagtcatcatgcagatgattta
ctcaacagtgggatggatacgttcatgggtaacaactcgtggaatgggacagtgcagaca
tccactttggcaaaggggggcgcctacttagagcagcggaatacgctgggtacaagtccc
ttagcggcagagttgcaagaggtcttgggacctgtagtcctaatgcaagataaggccgtg
gggcctgtggcacccccagaccctgggccttcaccatttaaggaagggtgtccccccatt
cctgatgatgcatggtatacagatgggtctagctggggtgctactgctccctgggttgct
gtcacagtccaccctagtactgacaccatatggtttgataccaggtgtggacaaagtagc
caatgggctgaactcaaagccgtgtggatggtgaacaccaaagaggtgacacctatgaat
ttgggggatcgacgtttgattaatgttcctgttatcactgctgctcttgtgggcattgtt
catcttgctgaaattctctttgatctcagtgccctgcaggtcattgttggtagctaa

>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_3|110_aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLEGRFEDEELQQILDDIQTKRSFQY

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_3|333_bp
atggcggcgggtggcagcgatccgcgggctggcgacgtagaggaggacgcctcacagctc
atctttcctaaagagtttgaaacagctgagacacttctaaattcagaagttcatatgctt
ctggaacatcgaaagcagcagaatgagagtgcagaggacgaacaggagctctcagaagtc
ttcatgaaaacattaaactacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgttcgtagcttggagggacggtttgaagatgaggagctgcagcagattcttgat
gatatccagacaaagcgcagctttcagtattaa

>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_4|355_aa
MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDSSSG
RENVSDLTLGPGNSPITRMNPASGALSPLPRPNGTANTTKNLVVTAEMCCYCFDVLYCHL
YGFPQPRLPRFTNDPYPLFVTWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRF
PPLTREELPKLFCSVSLLTNFEDASDYLDWEVGVHGIRIEFINEKGVKRTATYLPEVAKE
QDNYTGVTSDRKDAGAGSLGTAIMACVGLSSHVSESPRDWQTDWAPDWDQIQTIDSLLRK
GGFKAPITSEFRKTIKLTRYRSEKVTISYAEYIASRQHCFQNGTLHAPPLYNHYS

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_4|1068_bp
atgggaaaaagacgttgtgttcctccactcgagcccaagttggcagcaggctgttgtggg
gtcaagaagcccaaattatctggaagtggaacgcacagtcacgggaatcagtccacaact
gtccccggctctagttcaggacctcttcaaaaccaccagcatgtggacagcagcagtgga
cgggagaatgtgtcagacttaactctgggacctggaaactctcccatcacacgaatgaat
cccgcatcgggagcgctgagccctcttccccggcctaatggaactgccaacaccactaag
aatctggtggtgactgcagagatgtgctgctactgcttcgacgtactctactgtcacctc
tatggcttcccacagccacgacttcctagattcaccaatgacccctatccgctctttgtg
acgtggaagacagggcgggacaagcggcttcgtggctgcattgggaccttctcagccatg
aatcttcattcaggactcagggaatacacgttaaccagtgcacttaaggacagccgattt
ccccccctgacccgagaggagctgcctaaacttttctgctctgtctccctccttactaac
tttgaggatgccagtgattacctggactgggaggtaggggtccatgggattcgaattgaa
ttcattaatgaaaaaggtgtcaaacgcacagccacatatttacctgaggttgctaaggaa
caagataattatactggggtaacatctgacaggaaggacgcaggagcagggagcctgggg
acagccattatggcatgtgtcgggctatcatctcatgtctcagagtctccacgggactgg
cagacagactgggcgccagactgggatcagatccagacaatagactccttgctcaggaaa
ggtggctttaaagctccaattaccagtgaattcagaaaaacgatcaaactcaccaggtac
cgaagtgagaaggtgacaatcagttacgcagagtatattgcttcccgacagcactgtttc
cagaacggcactcttcatgccccgcccctctacaatcattactcctga

>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_5|90_aa
MGEGQNSNTDRILEVVDFGSSRTLMGDFERFKTSVEKVIADVVEIARELELEVEPENVTE
LLQSHYKTDQPHPESSAFSIHSGRFKGAHE

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_5|273_bp
atgggagaaggtcaaaatagcaacactgacaggattttggaagtagttgattttggaagt
agtagaaccctcatgggtgacttcgagaggttcaagacttcagtggagaaagtaattgct
gatgtggtggaaatagcaagagaactagaattagaagtggagccggaaaatgtgactgaa
ttgctgcagtctcattataaaactgaccagccccatcctgaatcatctgccttcagcata
cactcaggtcgtttcaaaggggcccacgaataa

>gi568815596r:127748110_127958100|GENSCAN_predicted_peptide_6|370_aa
XAKPKSEIHVSMATPVTVSMETVSNQNNDQPTIAVPPTAQQPPPTIPTMIAAASPPSQPA
VALSTIPGAVPITPPITTIAAAPPPSVTVGGSLSSVLGPPVPEIKVKEEVEPMDIMRPVS
AVPPLATNTVSPSLALLANNLSMPTSDLPPGASPRKKPRKQQHVISTEEGDMMETNSTDD
EKSTAKSLLVKAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYS
DVRVKEEKKAMLQEIANQKGVSCRAQGWKVHLCAAQLLQLTNLEHDVYERLTNLQEGIIP
KKKAATDDDLHRINELIQGNMQRCKLVMDQISEARDSMLKVLDHKDRVLKLLNKNGTVKK
VSKLKRKEKV

>gi568815596r:127748110_127958100|GENSCAN_predicted_CDS_6|1113_bp
nntgccaaacccaagtctgaaatccacgtgtctatggccactccggtcactgtgtccatg
gagactgtatccaatcaaaataatgatcagcctaccattgccgtccctccaactgcccag
cagcccccaccgaccattccaactatgattgcagcagccagtcccccgtcacaaccagcc
gttgccctttcaaccattcctggagcggtccccatcactccacccatcaccaccattgca
gctgcaccacctccatcagtcactgtgggtggcagtctttcctccgtcttgggccctccc
gttcctgaaattaaagtgaaagaagaagtagaaccaatggatatcatgaggccagtttct
gcagttcctccactggctaccaacactgtgtctccatctcttgcattgctggcaaacaac
ttgtccatgcctacaagtgacctaccacctggtgcctccccaaggaaaaagcctcgaaag
caacagcatgtgatctcaacagaagaaggtgacatgatggagacaaacagcactgatgat
gagaagtccactgccaagagtcttctggtgaaggctgagaagcgcaagtctcctcccaag
gagtatattgatgaggaaggtgtgagatatgtcccagtgcgtccaagaccccccattact
ttgcttcgtcactatcggaacccctggaaagctgcttaccaccactttcagaggtacagt
gacgtccgggtcaaagaggagaagaaagctatgctgcaggaaatagctaatcagaaagga
gtatcctgtcgtgctcaaggctggaaagtccacctctgtgctgcccagttactacagctg
acgaatctagaacatgatgtctatgaaagacttactaacctgcaggaagggattatccca
aagaaaaaagcagcaacagatgatgatctccaccgaataaacgaactgatacagggaaat
atgcagaggtgtaaacttgtgatggatcaaatcagtgaagccagagactccatgcttaag
gttttagatcataaagaccgtgtcctgaagctgcttaacaagaacgggactgtcaaaaaa
gtgtccaaattgaagcgaaaggaaaaagtctag