Result of FASTA (ccds) for pF1KB8899
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8899, 233 aa
  1>>>pF1KB8899 233 - 233 aa - 233 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3032+/-0.000715; mu= 10.1907+/- 0.043
 mean_var=104.3497+/-22.032, 0's: 0 Z-trim(112.1): 169  B-trim: 736 in 2/52
 Lambda= 0.125553
 statistics sampled from 12766 (12952) to 12766 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.398), width:  16
 Scan time:  2.050

The best scores are:                                      opt bits E(32554)
CCDS5407.1 HOXA6 gene_id:3203|Hs108|chr7           ( 233) 1616 302.5 1.5e-82
CCDS11531.1 HOXB6 gene_id:3216|Hs108|chr17         ( 224)  589 116.5 1.4e-26
CCDS41792.1 HOXC6 gene_id:3223|Hs108|chr12         ( 153)  513 102.6 1.5e-22
CCDS8871.1 HOXC6 gene_id:3223|Hs108|chr12          ( 235)  513 102.7 2.1e-22
CCDS5406.1 HOXA5 gene_id:3202|Hs108|chr7           ( 270)  462 93.6 1.4e-19
CCDS11532.1 HOXB7 gene_id:3217|Hs108|chr17         ( 217)  455 92.2 2.9e-19
CCDS2269.1 HOXD4 gene_id:3233|Hs108|chr2           ( 255)  445 90.5 1.1e-18
CCDS11530.1 HOXB5 gene_id:3215|Hs108|chr17         ( 269)  435 88.7 4.2e-18
CCDS5408.1 HOXA7 gene_id:3204|Hs108|chr7           ( 230)  428 87.3 8.9e-18
CCDS8873.1 HOXC4 gene_id:3221|Hs108|chr12          ( 264)  422 86.3 2.1e-17
CCDS11529.1 HOXB4 gene_id:3214|Hs108|chr17         ( 251)  421 86.1 2.3e-17
CCDS5405.1 HOXA4 gene_id:3201|Hs108|chr7           ( 320)  418 85.6 4.1e-17
CCDS8872.1 HOXC5 gene_id:3222|Hs108|chr12          ( 222)  413 84.6 5.7e-17
CCDS8870.1 HOXC8 gene_id:3224|Hs108|chr12          ( 242)  408 83.7 1.1e-16
CCDS2268.1 HOXD8 gene_id:3234|Hs108|chr2           ( 290)  388 80.2 1.6e-15
CCDS11533.1 HOXB8 gene_id:3218|Hs108|chr17         ( 243)  381 78.8 3.4e-15
CCDS56148.1 HOXD8 gene_id:3234|Hs108|chr2          ( 289)  380 78.7 4.4e-15
CCDS56149.1 HOXD8 gene_id:3234|Hs108|chr2          ( 106)  358 74.4 3.2e-14
CCDS2267.2 HOXD9 gene_id:3235|Hs108|chr2           ( 352)  338 71.2   1e-12
CCDS8869.1 HOXC9 gene_id:3225|Hs108|chr12          ( 260)  309 65.8   3e-11
CCDS5403.1 HOXA2 gene_id:3199|Hs108|chr7           ( 376)  306 65.4 5.9e-11
CCDS5409.1 HOXA9 gene_id:3205|Hs108|chr7           ( 272)  301 64.4 8.5e-11
CCDS5404.1 HOXA3 gene_id:3200|Hs108|chr7           ( 443)  304 65.1 8.6e-11


>>CCDS5407.1 HOXA6 gene_id:3203|Hs108|chr7                (233 aa)
 initn: 1616 init1: 1616 opt: 1616  Z-score: 1595.5  bits: 302.5 E(32554): 1.5e-82
Smith-Waterman score: 1616; 100.0% identity (100.0% similar) in 233 aa overlap (1-233:1-233)

               10        20        30        40        50        60
pF1KB8 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPCFYQQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPCFYQQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 SNSVLACNRASYEYGASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSSGQG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SNSVLACNRASYEYGASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSSGQG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 KALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYL
              130       140       150       160       170       180

              190       200       210       220       230   
pF1KB8 TRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 TRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE
              190       200       210       220       230   

>>CCDS11531.1 HOXB6 gene_id:3216|Hs108|chr17              (224 aa)
 initn: 780 init1: 551 opt: 589  Z-score: 590.4  bits: 116.5 E(32554): 1.4e-26
Smith-Waterman score: 815; 57.2% identity (75.8% similar) in 236 aa overlap (1-233:1-224)

               10        20        30         40        50         
pF1KB8 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGY-DALRPFPASYGASSLPDKTYTSPCFYQ
       ::::::: ::: .: :::.:::::::::..:: : :: .:: :: .   :: ...  .: 
CCDS11 MSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYGPGPGQDKGFATSSYYP
               10        20        30        40        50        60

      60        70          80        90       100       110       
pF1KB8 QSNSVLACNRASY-EYG-ASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSS
        ...  . .::.  .:: :  :: .:. :. . ::. .:  :     : :: . : : . 
CCDS11 PAGG--GYGRAAPCDYGPAPAFYREKE-SACALSGADEQ--PP----FHPEPR-KSDCA-
                 70        80         90             100           

       120       130       140       150       160       170       
pF1KB8 GQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFN
        : :..  :  ..: ..:::::::::::: .. .:  :::::::::::::::::::::.:
CCDS11 -QDKSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLELEKEFHYN
      110       120       130       140       150       160        

       180       190       200       210       220       230   
pF1KB8 RYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE
       ::::::::::::.:::::::::::::::::::::::.::....: :.:. : : .:
CCDS11 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEEEEKQAE
      170       180       190       200       210       220    

>>CCDS41792.1 HOXC6 gene_id:3223|Hs108|chr12              (153 aa)
 initn: 521 init1: 488 opt: 513  Z-score: 518.4  bits: 102.6 E(32554): 1.5e-22
Smith-Waterman score: 513; 67.2% identity (81.0% similar) in 116 aa overlap (114-229:21-133)

            90       100       110       120       130       140   
pF1KB8 DLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSSGQGKALHDEGADRKYTSPVYPWMQRM
                                     : :: ::..      :.: .  .:::::::
CCDS41           MLSNCRQNTLGHNTQTSIAQDFSSEQGRT---APQDQKASIQIYPWMQRM
                         10        20           30        40       

           150       160       170       180       190       200   
pF1KB8 NSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWF
       :: .:. ::.  ::::: :.::::::::::::::::::::::::::::::::::::::::
CCDS41 NSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWF
        50        60        70        80        90       100       

           210       220       230                   
pF1KB8 QNRRMKWKKENKLINSTQPSGEDSEAKAGE                
       ::::::::::..: .. . .:  . :                    
CCDS41 QNRRMKWKKESNLTSTLSGGGGGATADSLGGKEEKREETEEEKQKE
       110       120       130       140       150   

>>CCDS8871.1 HOXC6 gene_id:3223|Hs108|chr12               (235 aa)
 initn: 714 init1: 488 opt: 513  Z-score: 515.7  bits: 102.7 E(32554): 2.1e-22
Smith-Waterman score: 696; 49.8% identity (71.6% similar) in 229 aa overlap (1-229:1-215)

               10        20        30        40        50        60
pF1KB8 MSSYFVNPTFPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPCFYQQ
       :.:::.::..   : .:::  : .. : ...:: .: : ..:::.   .. :..: .  :
CCDS88 MNSYFTNPSLSCHLAGGQD-VLPNVALNSTAYDPVRHF-STYGAAVAQNRIYSTPFYSPQ
               10         20        30         40        50        

               70        80        90       100       110       120
pF1KB8 SNSVLACNRASYEYGASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSSGQG
        : :.. .:. :.::.. ::..::. .     . .:   :   . :  :    : :: ::
CCDS88 ENVVFSSSRGPYDYGSNSFYQEKDMLS-----NCRQNTLGHNTQTSIAQ----DFSSEQG
       60        70        80             90       100             

              130       140       150       160       170       180
pF1KB8 KALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYL
       ..  .   :.: .  .::::::::: .:. ::.  ::::: :.:::::::::::::::::
CCDS88 RTAPQ---DQKASIQIYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYL
     110          120       130       140       150       160      

              190       200       210       220       230          
pF1KB8 TRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE       
       :::::::::::::::::::::::::::::::::..: .. . .:  . :           
CCDS88 TRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGGGATADSLGGKEEKRE
        170       180       190       200       210       220      

CCDS88 ETEEEKQKE
        230     

>>CCDS5406.1 HOXA5 gene_id:3202|Hs108|chr7                (270 aa)
 initn: 492 init1: 444 opt: 462  Z-score: 464.9  bits: 93.6 E(32554): 1.4e-19
Smith-Waterman score: 462; 45.3% identity (66.1% similar) in 192 aa overlap (36-216:71-256)

          10        20        30        40         50        60    
pF1KB8 VNPTFPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLP-DKTYTSPCFYQQSNSV
                                     : . ::  ::. : .  :..:    .: . 
CCDS54 HSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAAS--ASAAPAEPRYSQPATSTHSPQP
               50        60        70          80        90        

             70        80            90           100       110    
pF1KB8 --LACNRASYEYGASCFYSDKDL----SGASP-SGS---GKQRGPGDYLHFSPEQQYKPD
         : :. ..   :..  .. :.     ::::  .::   ....: :     :  ..  : 
CCDS54 DPLPCSAVAPSPGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTA---SGAEEDAP-
      100       110       120       130       140          150     

          120       130       140       150       160       170    
pF1KB8 SSSGQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEF
       .:: :..:  . .        .::::....     . : .:.:.: .:::::::::::::
CCDS54 ASSEQASAQSEPSPAPPAQPQIYPWMRKLHISHDNIGGPEGKRARTAYTRYQTLELEKEF
          160       170       180       190       200       210    

          180       190       200       210       220       230   
pF1KB8 HFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE
       :::::::::::::::.::::.:::::::::::::::::.:::                 
CCDS54 HFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP   
          220       230       240       250       260       270   

>>CCDS11532.1 HOXB7 gene_id:3217|Hs108|chr17              (217 aa)
 initn: 439 init1: 392 opt: 455  Z-score: 459.4  bits: 92.2 E(32554): 2.9e-19
Smith-Waterman score: 456; 43.3% identity (62.3% similar) in 215 aa overlap (40-233:12-215)

      10        20        30        40        50        60         
pF1KB8 FPGSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPCFYQQSNSVLACNR
                                     ..: :::   .....  : .:.. ..: : 
CCDS11                    MSSLYYANTLFSKYPASS---SVFATGAFPEQTSCAFASNP
                                  10           20        30        

      70        80         90         100                    110   
pF1KB8 ASYEYGASCFYS-DKDLSGASPSGSGK--QRGPGDY------------LHFSP-EQQYK-
           :::.   :   ...:  :.:.:   : . : :            .: .: ::. . 
CCDS11 QRPGYGAGSGASFAASMQGLYPGGGGMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLSG
       40        50        60        70        80        90        

               120        130       140       150       160        
pF1KB8 --P-DSSSGQG-KALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTL
         : ::... : :  .:     . .  .::::.          :.  .::::::::::::
CCDS11 VCPGDSAKAAGAKEQRDSDLAAESNFRIYPWMRSS--------GTDRKRGRQTYTRYQTL
      100       110       120       130               140       150

      170       180       190       200       210       220        
pF1KB8 ELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSE
       :::::::.:::::::::::::..::::::::::::::::::::::::  .    . . .:
CCDS11 ELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTAGPGTTGQDRAE
              160       170       180       190       200       210

      230     
pF1KB8 AKAGE  
       :.  :  
CCDS11 AEEEEEE
              

>>CCDS2269.1 HOXD4 gene_id:3233|Hs108|chr2                (255 aa)
 initn: 449 init1: 366 opt: 445  Z-score: 448.6  bits: 90.5 E(32554): 1.1e-18
Smith-Waterman score: 447; 39.1% identity (54.8% similar) in 248 aa overlap (1-231:3-230)

                      10        20         30        40        50  
pF1KB8   MSSYFVN-----PTFPGSLPSGQDSFLG-QLPLYQAGYDALRPFPASYGASSLPDKTY
         ::::.::     : ::      : ..:: :   : .:        .. ::.  :   :
CCDS22 MVMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGG--------GAQGADFQPPGLY
               10        20        30                40        50  

             60        70        80            90        100       
pF1KB8 TSPCFYQQSNSVLACNRASYEYGASCFYSDKDLS----GASPSGSGKQRG-PGDYLHFSP
         : : .:             .:.:     . :     :  :.: : . . ::.     :
CCDS22 PRPDFGEQP------------FGGSGPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPP
             60                    70        80        90       100

       110           120       130       140         150       160 
pF1KB8 EQQYKP----DSSSGQGKALHDEGADRKYTSPVYPWMQRM--NSCAGAVYGSHGRRGRQT
            :     . : .       :.  :  . :::::...  ::      :.. .:.: .
CCDS22 APPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTA
              110       120       130       140       150       160

             170       180       190       200       210       220 
pF1KB8 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQ
       ::: :.::::::::::::::::::::::..:::.:::::::::::::::::..:: :.  
CCDS22 YTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNTKG
              170       180       190       200       210       220

             230                          
pF1KB8 PSGEDSEAKAGE                       
        :. .: ...                         
CCDS22 RSSSSSSSSSCSSSVAPSQHLQPMAKDHHTDLTTL
              230       240       250     

>>CCDS11530.1 HOXB5 gene_id:3215|Hs108|chr17              (269 aa)
 initn: 477 init1: 389 opt: 435  Z-score: 438.5  bits: 88.7 E(32554): 4.2e-18
Smith-Waterman score: 442; 42.1% identity (65.0% similar) in 197 aa overlap (42-216:66-255)

              20        30        40        50            60       
pF1KB8 GSLPSGQDSFLGQLPLYQAGYDALRPFPASYGASSLPDKTYTSPC----FYQQSNSVLAC
                                     .:: .  .... .:     : : ..:   :
CCDS11 DPAAMHTGSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAASS---C
          40        50        60        70        80        90     

        70        80        90          100                     110
pF1KB8 NRASYEYGASCFYSDKDLSGASPSGSG---KQRGPGDYLHFS----------PE----QQ
       . .: : .  :  .. :  ::.::.:.   .  . ..  .:.          ::    : 
CCDS11 SLSSPE-SLPC--TNGDSHGAKPSASSPSDQATSASSSANFTEIDEASASSEPEEAASQL
             100         110       120       130       140         

              120       130        140       150       160         
pF1KB8 YKPDSSSGQGKALHDEGADRKYTSP-VYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLE
        .:. . .: . .    :  .  .: ..:::....  .  . :  :.:.: .::::::::
CCDS11 SSPSLARAQPEPMATSTAAPEGQTPQIFPWMRKLH-ISHDMTGPDGKRARTAYTRYQTLE
     150       160       170       180        190       200        

     170       180       190       200       210       220         
pF1KB8 LEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEA
       ::::::::::::::::::::.::::.:::::::::::::::::.:::             
CCDS11 LEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSLATAGSAFQ
      210       220       230       240       250       260        

     230   
pF1KB8 KAGE
           
CCDS11 P   
           

>>CCDS5408.1 HOXA7 gene_id:3204|Hs108|chr7                (230 aa)
 initn: 462 init1: 389 opt: 428  Z-score: 432.6  bits: 87.3 E(32554): 8.9e-18
Smith-Waterman score: 441; 44.9% identity (60.2% similar) in 216 aa overlap (2-215:3-190)

                10        20        30         40        50        
pF1KB8  MSSYFVNPTFPGSLPSGQDSFLGQLPLYQA-GYDALRPFPASYGASSLPDKTYTSPCFY
         :::.::  : ..  .: . : .  :   . . .. :   ..:::..    . : : .:
CCDS54 MSSSYYVNALF-SKYTAGASLFQNAEPTSCSFAPNSQR---SGYGAGAGAFAS-TVPGLY
               10         20        30           40         50     

       60        70         80        90       100       110       
pF1KB8 QQSNSVLACNRAS-YEYGASCFYSDKDLSGASPSGSGKQRGPGDYLHFSPEQQYKPDSSS
       . .. .     :: :  ::       :  :  : .:  :  ::    ..     : :   
CCDS54 NVNSPLYQSPFASGYGLGA-------DAYGNLPCASYDQNIPGLCSDLAKGACDKTD---
          60        70               80        90       100        

       120       130       140       150       160       170       
pF1KB8 GQGKALHDEGADRKYTSPVYPWMQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFN
        .: :::  .:. ..   .::::.          :   .:::::::::::::::::::::
CCDS54 -EG-ALHG-AAEANFR--IYPWMRSS--------GPDRKRGRQTYTRYQTLELEKEFHFN
           110          120               130       140       150  

       180       190       200       210       220       230       
pF1KB8 RYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQPSGEDSEAKAGE    
       ::::::::::::.:::::::::::::::::::::::.:                      
CCDS54 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDEGPTAAAAPEGAVPSAAATAA
            160       170       180       190       200       210  

CCDS54 ADKADEEDDDEEEEDEEE
            220       230

>>CCDS8873.1 HOXC4 gene_id:3221|Hs108|chr12               (264 aa)
 initn: 403 init1: 334 opt: 422  Z-score: 425.9  bits: 86.3 E(32554): 2.1e-17
Smith-Waterman score: 444; 38.8% identity (60.4% similar) in 240 aa overlap (1-224:8-229)

                      10        20              30          40     
pF1KB8        MSSYFVNPTFPGSLPSGQDSFLGQL-PLY-----QAGYDALRP--FPASYGAS
              :.: ...: ::     .:.:.. .  : :     ..:..  .   .:      
CCDS88 MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPEHSPEYYGRTRESGFQHHHQELYPPPPPRP
               10        20        30        40        50        60

          50        60        70        80        90        100    
pF1KB8 SLPDKTYTSPCFYQQSNSVLACNRASYEYGASCFYSDKDLSGASPSG-SGKQRGPGDYLH
       : :.. :.   .   .::     :.     :.  . .:. :   :.  :: . .:     
CCDS88 SYPERQYSCTSLQGPGNS-----RGHGPAQAGHHHPEKSQSLCEPAPLSGASASP-----
               70             80        90       100       110     

          110       120       130        140        150        160 
pF1KB8 FSPEQQYKPDSSSGQGKALHDEGADRKYTSP-VYPWMQRMN-SCAGAVY-GSHGRRGRQT
        ::     : . : :    :  .:  :  .: :::::.... : ..  : :.. .:.: .
CCDS88 -SPA----PPACS-QPAPDHPSSAASK--QPIVYPWMKKIHVSTVNPNYNGGEPKRSRTA
                    120       130         140       150       160  

             170       180       190       200       210           
pF1KB8 YTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKENKLIN---
       ::: :.::::::::.:::::::::::::..:::.:::::::::::::::::...: :   
CCDS88 YTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHRLPNTKV
            170       180       190       200       210       220  

       220       230                             
pF1KB8 -STQPSGEDSEAKAGE                          
        :. :.:                                   
CCDS88 RSAPPAGAAPSTLSAATPGTSEDHSQSATPPEQQRAEDITRL
            230       240       250       260    




233 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 20:00:06 2016 done: Sat Nov  5 20:00:06 2016
 Total Scan time:  2.050 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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