Result of FASTA (omim) for pF1KB7759
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7759, 447 aa
  1>>>pF1KB7759 447 - 447 aa - 447 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.2402+/-0.000294; mu= 15.2623+/- 0.019
 mean_var=117.0786+/-23.933, 0's: 0 Z-trim(120.3): 413  B-trim: 1961 in 1/55
 Lambda= 0.118532
 statistics sampled from 35061 (35476) to 35061 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.764), E-opt: 0.2 (0.416), width:  16
 Scan time:  8.990

The best scores are:                                      opt bits E(85289)
XP_005252763 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
XP_005252762 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
XP_011518107 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
XP_006718176 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
XP_005252764 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
XP_006718175 (OMIM: 602423) PREDICTED: oxysterols  ( 447) 3026 528.0 1.9e-149
NP_005684 (OMIM: 602423) oxysterols receptor LXR-a ( 447) 3026 528.0 1.9e-149
NP_001238864 (OMIM: 602423) oxysterols receptor LX ( 453) 2913 508.7 1.2e-143
NP_001238863 (OMIM: 602423) oxysterols receptor LX ( 453) 2913 508.7 1.2e-143
XP_016872547 (OMIM: 602423) PREDICTED: oxysterols  ( 402) 2711 474.1 2.9e-133
XP_005252767 (OMIM: 602423) PREDICTED: oxysterols  ( 402) 2711 474.1 2.9e-133
XP_005252766 (OMIM: 602423) PREDICTED: oxysterols  ( 402) 2711 474.1 2.9e-133
XP_006718178 (OMIM: 602423) PREDICTED: oxysterols  ( 402) 2711 474.1 2.9e-133
NP_001123574 (OMIM: 602423) oxysterols receptor LX ( 402) 2711 474.1 2.9e-133
XP_006718179 (OMIM: 602423) PREDICTED: oxysterols  ( 402) 2711 474.1 2.9e-133
XP_016872545 (OMIM: 602423) PREDICTED: oxysterols  ( 332) 2182 383.6 4.2e-106
XP_016872546 (OMIM: 602423) PREDICTED: oxysterols  ( 323) 2174 382.2 1.1e-105
XP_011518109 (OMIM: 602423) PREDICTED: oxysterols  ( 313) 1824 322.4 1.1e-87
XP_005252773 (OMIM: 602423) PREDICTED: oxysterols  ( 313) 1824 322.4 1.1e-87
XP_005252772 (OMIM: 602423) PREDICTED: oxysterols  ( 358) 1824 322.4 1.2e-87
NP_001123573 (OMIM: 602423) oxysterols receptor LX ( 387) 1646 292.0 1.8e-78
XP_005252770 (OMIM: 602423) PREDICTED: oxysterols  ( 387) 1646 292.0 1.8e-78
XP_011518110 (OMIM: 602423) PREDICTED: oxysterols  ( 235) 1534 272.7 7.4e-73
XP_011518108 (OMIM: 602423) PREDICTED: oxysterols  ( 342) 1331 238.1 2.8e-62
NP_009052 (OMIM: 600380) oxysterols receptor LXR-b ( 461) 1233 221.4 3.8e-57
NP_001243576 (OMIM: 600380) oxysterols receptor LX ( 364) 1228 220.5 5.8e-57
XP_005252775 (OMIM: 602423) PREDICTED: oxysterols  ( 253)  985 178.8 1.4e-44
NP_005114 (OMIM: 603826,617049) bile acid receptor ( 472)  915 167.1 9.1e-41
NP_001193921 (OMIM: 603826,617049) bile acid recep ( 482)  915 167.1 9.3e-41
NP_001193908 (OMIM: 603826,617049) bile acid recep ( 476)  897 164.0 7.8e-40
NP_001193906 (OMIM: 603826,617049) bile acid recep ( 476)  897 164.0 7.8e-40
XP_011537342 (OMIM: 603826,617049) PREDICTED: bile ( 476)  897 164.0 7.8e-40
NP_001193922 (OMIM: 603826,617049) bile acid recep ( 486)  897 164.0 7.9e-40
XP_016862602 (OMIM: 145650,188570,190160,274300) P ( 430)  747 138.3 3.8e-32
XP_011532355 (OMIM: 145650,188570,190160,274300) P ( 430)  747 138.3 3.8e-32
XP_016862603 (OMIM: 145650,188570,190160,274300) P ( 430)  747 138.3 3.8e-32
XP_016862604 (OMIM: 145650,188570,190160,274300) P ( 430)  747 138.3 3.8e-32
XP_016862601 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_011532353 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_016862597 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_016862598 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_016862600 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_011532349 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
XP_011532350 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
NP_000452 (OMIM: 145650,188570,190160,274300) thyr ( 461)  747 138.3   4e-32
XP_011532351 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
NP_001239563 (OMIM: 145650,188570,190160,274300) t ( 461)  747 138.3   4e-32
XP_005265480 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32
NP_001121648 (OMIM: 145650,188570,190160,274300) t ( 461)  747 138.3   4e-32
XP_011532352 (OMIM: 145650,188570,190160,274300) P ( 461)  747 138.3   4e-32


>>XP_005252763 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_005 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>XP_005252762 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_005 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>XP_011518107 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_011 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>XP_006718176 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_006 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>XP_005252764 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_005 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>XP_006718175 (OMIM: 602423) PREDICTED: oxysterols rece  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
XP_006 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>NP_005684 (OMIM: 602423) oxysterols receptor LXR-alpha  (447 aa)
 initn: 3026 init1: 3026 opt: 3026  Z-score: 2804.1  bits: 528.0 E(85289): 1.9e-149
Smith-Waterman score: 3026; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)

               10        20        30        40        50        60
pF1KB7 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MSLWLGAPVPDIPPDSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 APDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 ETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLI
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSV
              370       380       390       400       410       420

              430       440       
pF1KB7 HSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::
NP_005 HSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       

>>NP_001238864 (OMIM: 602423) oxysterols receptor LXR-al  (453 aa)
 initn: 2910 init1: 2910 opt: 2913  Z-score: 2699.6  bits: 508.7 E(85289): 1.2e-143
Smith-Waterman score: 2913; 99.1% identity (99.1% similar) in 438 aa overlap (13-447:16-453)

                  10           20        30        40        50    
pF1KB7    MSLWLGAPVPDIPPD---SAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTA
                      ::    :::::::::::::::::::::::::::::::::::::::
NP_001 MQQTSWNPLGGTCKQPPGRTHSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTA
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB7 GVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLS
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KB7 CEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQI
              130       140       150       160       170       180

          180       190       200       210       220       230    
pF1KB7 RLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLR
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB7 VTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB7 IEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB7 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL
              370       380       390       400       410       420

          420       430       440       
pF1KB7 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::::::::
NP_001 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       450   

>>NP_001238863 (OMIM: 602423) oxysterols receptor LXR-al  (453 aa)
 initn: 2910 init1: 2910 opt: 2913  Z-score: 2699.6  bits: 508.7 E(85289): 1.2e-143
Smith-Waterman score: 2913; 99.1% identity (99.1% similar) in 438 aa overlap (13-447:16-453)

                  10           20        30        40        50    
pF1KB7    MSLWLGAPVPDIPPD---SAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTA
                      ::    :::::::::::::::::::::::::::::::::::::::
NP_001 MQQTSWNPLGGTCKQPPGRTHSAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTA
               10        20        30        40        50        60

           60        70        80        90       100       110    
pF1KB7 GVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLS
               70        80        90       100       110       120

          120       130       140       150       160       170    
pF1KB7 CEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQI
              130       140       150       160       170       180

          180       190       200       210       220       230    
pF1KB7 RLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLR
              190       200       210       220       230       240

          240       250       260       270       280       290    
pF1KB7 VTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSA
              250       260       270       280       290       300

          300       310       320       330       340       350    
pF1KB7 IEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDA
              310       320       330       340       350       360

          360       370       380       390       400       410    
pF1KB7 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSL
              370       380       390       400       410       420

          420       430       440       
pF1KB7 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
       :::::::::::::::::::::::::::::::::
NP_001 RTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
              430       440       450   

>>XP_016872547 (OMIM: 602423) PREDICTED: oxysterols rece  (402 aa)
 initn: 2711 init1: 2711 opt: 2711  Z-score: 2513.6  bits: 474.1 E(85289): 2.9e-133
Smith-Waterman score: 2711; 100.0% identity (100.0% similar) in 402 aa overlap (46-447:1-402)

          20        30        40        50        60        70     
pF1KB7 SAVELWKPGAQDASSQAQGGSSCILREEARMPHSAGGTAGVGLEAAEPTALLTRAEPPSE
                                     ::::::::::::::::::::::::::::::
XP_016                               MPHSAGGTAGVGLEAAEPTALLTRAEPPSE
                                             10        20        30

          80        90       100       110       120       130     
pF1KB7 PTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICH
               40        50        60        70        80        90

         140       150       160       170       180       190     
pF1KB7 SGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPR
              100       110       120       130       140       150

         200       210       220       230       240       250     
pF1KB7 ASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREARQQRFA
              160       170       180       190       200       210

         260       270       280       290       300       310     
pF1KB7 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITF
              220       230       240       250       260       270

         320       330       340       350       360       370     
pF1KB7 LKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQ
              280       290       300       310       320       330

         380       390       400       410       420       430     
pF1KB7 LQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKL
              340       350       360       370       380       390

         440       
pF1KB7 PPLLSEIWDVHE
       ::::::::::::
XP_016 PPLLSEIWDVHE
              400  




447 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 22:11:34 2016 done: Fri Nov  4 22:11:35 2016
 Total Scan time:  8.990 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com