Result of FASTA (omim) for pF1KE0531
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0531, 411 aa
  1>>>pF1KE0531 411 - 411 aa - 411 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9405+/-0.000385; mu= 18.8867+/- 0.024
 mean_var=61.6467+/-12.345, 0's: 0 Z-trim(112.1): 18  B-trim: 211 in 1/51
 Lambda= 0.163350
 statistics sampled from 20869 (20875) to 20869 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.245), width:  16
 Scan time:  7.960

The best scores are:                                      opt bits E(85289)
XP_005261672 (OMIM: 104170,609241,609242) PREDICTE ( 411) 2872 685.6 5.9e-197
XP_005261673 (OMIM: 104170,609241,609242) PREDICTE ( 411) 2872 685.6 5.9e-197
NP_000253 (OMIM: 104170,609241,609242) alpha-N-ace ( 411) 2872 685.6 5.9e-197
NP_000160 (OMIM: 300644,301500) alpha-galactosidas ( 429) 1282 310.9 3.9e-84


>>XP_005261672 (OMIM: 104170,609241,609242) PREDICTED: a  (411 aa)
 initn: 2872 init1: 2872 opt: 2872  Z-score: 3656.9  bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
              370       380       390       400       410 

>>XP_005261673 (OMIM: 104170,609241,609242) PREDICTED: a  (411 aa)
 initn: 2872 init1: 2872 opt: 2872  Z-score: 3656.9  bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
              370       380       390       400       410 

>>NP_000253 (OMIM: 104170,609241,609242) alpha-N-acetylg  (411 aa)
 initn: 2872 init1: 2872 opt: 2872  Z-score: 3656.9  bits: 685.6 E(85289): 5.9e-197
Smith-Waterman score: 2872; 100.0% identity (100.0% similar) in 411 aa overlap (1-411:1-411)

               10        20        30        40        50        60
pF1KE0 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPKNCISEQLFMEMAD
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFLADYVHSLGLKLGIYA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 DMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCFSTPEERAQGYPKMAAALNATG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 RPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 PVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTDLRTISAQNMDILQNP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRTDMPYRYHSSLGQLNF
              310       320       330       340       350       360

              370       380       390       400       410 
pF1KE0 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 TGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYLYPIKNLEMSQQ
              370       380       390       400       410 

>>NP_000160 (OMIM: 300644,301500) alpha-galactosidase A   (429 aa)
 initn: 1102 init1: 774 opt: 1282  Z-score: 1631.6  bits: 310.9 E(85289): 3.9e-84
Smith-Waterman score: 1282; 49.9% identity (72.9% similar) in 399 aa overlap (18-409:32-424)

                            10        20        30        40       
pF1KE0              MLLKTVLLLGHVAQVLMLDNGLLQTPPMGWLAWERFRCNINCDEDPK
                                     ::::: .:: :::: :::: ::..:.:.: 
NP_000 QLRNPELHLGCALALRFLALVSWDIPGARALDNGLARTPTMGWLHWERFMCNLDCQEEPD
              10        20        30        40        50        60 

        50        60        70        80         90       100      
pF1KE0 NCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGG-RDASGRLMPDPKRFPHGIPFLA
       .::::.::::::. :...::.: :: :: :::::..  ::. :::. ::.::::::  ::
NP_000 SCISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLA
              70        80        90       100       110       120 

        110       120       130       140       150        160     
pF1KE0 DYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDGCF-STPEER
       .:::: :::::::::.:: :: :.::. .     ::::::.: ::.::.:::. .. :. 
NP_000 NYVHSKGLKLGIYADVGNKTCAGFPGS-FGYYDIDAQTFADWGVDLLKFDGCYCDSLENL
             130       140        150       160       170       180

         170       180       190       200       210       220     
pF1KE0 AQGYPKMAAALNATGRPIAFSCSWPAYEGGLPPRVNYSLLADICNLWRNYDDIQDSWWSV
       :.:: .:. ::: ::: :..:: :: :   .  . ::. . . :: :::. ::.::: :.
NP_000 ADGYKHMSLALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSI
              190       200       210        220       230         

         230       240       250       260       270       280     
pF1KE0 LSILNWFVEHQDILQPVAGPGHWNDPDMLLIGNFGLSLEQSRAQMALWTVLAAPLLMSTD
        :::.:   .:. .  ::::: :::::::.::::::: .:. .:::::...::::.::.:
NP_000 KSILDWTSFNQERIVDVAGPGGWNDPDMLVIGNFGLSWNQQVTQMALWAIMAAPLFMSND
     240       250       260       270       280       290         

         290       300       310       320       330       340     
pF1KE0 LRTISAQNMDILQNPLMIKINQDPLGIQGRRIHKEKSLIEVYMRPLSNKASALVFFSCRT
       :: :: :   .::.  .: ::::::: :: ....  .. ::. ::::. : :..... : 
NP_000 LRHISPQAKALLQDKDVIAINQDPLGKQGYQLRQGDNF-EVWERPLSGLAWAVAMIN-RQ
     300       310       320       330        340       350        

           350          360       370       380       390       400
pF1KE0 DM--PYRYH---SSLGQLNFTGSVIYEAQDVYSGDIISGLRDETNFTVIINPSGVVMWYL
       ..  :  :    .:::.    . . . .: .     ..  .  . .   :::.:.:.  :
NP_000 EIGGPRSYTIAVASLGKGVACNPACFITQLLPVKRKLGFYEWTSRLRSHINPTGTVLLQL
       360       370       380       390       400       410       

              410    
pF1KE0 YPIKNLEMSQQ   
          ....::     
NP_000 E--NTMQMSLKDLL
         420         




411 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 01:26:01 2016 done: Thu Nov  3 01:26:02 2016
 Total Scan time:  7.960 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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