Result of FASTA (ccds) for pF1KE0206
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0206, 226 aa
  1>>>pF1KE0206 226 - 226 aa - 226 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8721+/-0.000686; mu= 18.0037+/- 0.042
 mean_var=85.8476+/-17.076, 0's: 0 Z-trim(111.8): 95  B-trim: 0 in 0/51
 Lambda= 0.138424
 statistics sampled from 12569 (12679) to 12569 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.389), width:  16
 Scan time:  1.870

The best scores are:                                      opt bits E(32554)
CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7         ( 226) 1497 307.9 3.4e-84
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12          ( 166)  763 161.2 3.7e-40
CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16        ( 169)  695 147.6 4.5e-36
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4           ( 173)  606 129.9   1e-30
CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7           ( 175)  591 126.9 8.3e-30
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20         ( 172)  502 109.1 1.8e-24
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18       ( 171)  492 107.1 7.3e-24
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18       ( 177)  492 107.1 7.5e-24
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18      ( 172)  485 105.7 1.9e-23


>>CCDS34713.1 MYL10 gene_id:93408|Hs108|chr7              (226 aa)
 initn: 1497 init1: 1497 opt: 1497  Z-score: 1625.1  bits: 307.9 E(32554): 3.4e-84
Smith-Waterman score: 1497; 100.0% identity (100.0% similar) in 226 aa overlap (1-226:1-226)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
              130       140       150       160       170       180

              190       200       210       220      
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
       ::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
              190       200       210       220      

>>CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12               (166 aa)
 initn: 804 init1: 761 opt: 763  Z-score: 834.5  bits: 161.2 E(32554): 3.7e-40
Smith-Waterman score: 829; 67.0% identity (77.5% similar) in 200 aa overlap (27-226:2-166)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                 ::..:.::: : :.:::::::.:.:::::::   
CCDS31                          MAPKKAKKRA-GGANSNVFSMFEQTQIQEFKE---
                                        10         20        30    

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      :::::::::::::::.:::::::::::.:
CCDS31 -------------------------------AFTIMDQNRDGFIDKNDLRDTFAALGRVN
                                             40        50        60

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
       :::::.. :.::::::::::::::::::::::.:::::::.:::::: :::: .::: ..
CCDS31 VKNEEIDEMIKEAPGPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVR
               70        80        90       100       110       120

              190       200       210       220      
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD
       : : :::.:::.::: :::::::::: :::::.:: ..::::::::
CCDS31 EMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHIITHGEEKD
              130       140       150       160      

>>CCDS10677.1 MYLPF gene_id:29895|Hs108|chr16             (169 aa)
 initn: 717 init1: 695 opt: 695  Z-score: 761.0  bits: 147.6 E(32554): 4.5e-36
Smith-Waterman score: 756; 60.5% identity (75.0% similar) in 200 aa overlap (27-226:2-167)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                 ::.::..:.   .::.:::::::.:::::::   
CCDS10                          MAPKRAKRRTVEGGSSSVFSMFDQTQIQEFKE---
                                        10        20        30     

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      :::..::::::.::::::::::::.::.:
CCDS10 -------------------------------AFTVIDQNRDGIIDKEDLRDTFAAMGRLN
                                            40        50        60 

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
       ::::::.::.::: ::::::::::::::::::.:::..:  ::::.: :::: .:   ..
CCDS10 VKNEELDAMMKEASGPINFTVFLTMFGEKLKGADPEDVITGAFKVLDPEGKGTIKKKFLE
              70        80        90       100       110       120 

              190       200       210       220        
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD  
       : : :: ::::.::.:.:.::::::: ::.::.:.:::::::. ::  
CCDS10 ELLTTQCDRFSQEEIKNMWAAFPPDVGGNVDYKNICYVITHGDAKDQE
             130       140       150       160         

>>CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4                (173 aa)
 initn: 721 init1: 604 opt: 606  Z-score: 664.9  bits: 129.9 E(32554): 1e-30
Smith-Waterman score: 638; 53.7% identity (70.2% similar) in 205 aa overlap (27-226:2-172)

               10        20        30             40        50     
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGT-----ASSNVFSMFDQSQIQEF
                                 : :...:.  :.     ::::::: :.:.:::::
CCDS43                          MASRKTKKKEGGALRAQRASSNVFSNFEQTQIQEF
                                        10        20        30     

          60        70        80        90       100       110     
pF1KE0 KESLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAA
       ::                                  :::.::::::::::::::.::.:.
CCDS43 KE----------------------------------AFTLMDQNRDGFIDKEDLKDTYAS
                                            40        50        60 

         120       130       140       150       160       170     
pF1KE0 LGRINVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVK
       ::. :::..::.::.::: ::::::.::..:::::.::: :::::.:::..: .::: ..
CCDS43 LGKTNVKDDELDAMLKEASGPINFTMFLNLFGEKLSGTDAEETILNAFKMLDPDGKGKIN
              70        80        90       100       110       120 

         180       190       200       210       220       
pF1KE0 ADVIKEKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD 
        . ::. ::.:::... ::: :::     :: :::::. : :::::::::. 
CCDS43 KEYIKRLLMSQADKMTAEEVDQMFQFASIDVAGNLDYKALSYVITHGEEKEE
             130       140       150       160       170   

>>CCDS5478.1 MYL7 gene_id:58498|Hs108|chr7                (175 aa)
 initn: 719 init1: 589 opt: 591  Z-score: 648.6  bits: 126.9 E(32554): 8.3e-30
Smith-Waterman score: 623; 51.2% identity (70.4% similar) in 203 aa overlap (24-226:7-174)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                              : ..   : :.:.  .::::::::.:.:::::::   
CCDS54                  MASRKAGTRGKVAATKQAQ-RGSSNVFSMFEQAQIQEFKE---
                                10         20        30            

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      ::. .::::::.: : :::.:.. ::...
CCDS54 -------------------------------AFSCIDQNRDGIICKADLRETYSQLGKVS
                                     40        50        60        

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
       : .:::.::..:. ::::::::::.:::::.::::::.:: ::..::  ::: :. : .:
CCDS54 VPEEELDAMLQEGKGPINFTVFLTLFGEKLNGTDPEEAILSAFRMFDPSGKGVVNKDEFK
       70        80        90       100       110       120        

              190       200       210       220       
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHGEEKD 
       . :.::::.::  ::.::::  : :. ::.::..:::.::::.::. 
CCDS54 QLLLTQADKFSPAEVEQMFALTPMDLAGNIDYKSLCYIITHGDEKEE
      130       140       150       160       170     

>>CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20              (172 aa)
 initn: 495 init1: 369 opt: 502  Z-score: 552.7  bits: 109.1 E(32554): 1.8e-24
Smith-Waterman score: 543; 46.5% identity (67.3% similar) in 202 aa overlap (26-226:5-171)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                .:  .. :.    :.::::.::::::::::::   
CCDS13                      MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKE---
                                    10        20        30         

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      ::...:::::::::::::.: .:.::. :
CCDS13 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
                                        40        50        60     

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
         .: ::.:..:::::::::.:::::::::.:::::..: .::  :: :..::.. : ..
CCDS13 PTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLR
           70        80        90       100       110       120    

              190       200       210       220        
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD 
       : : :..:::..::: .:.   : :  ::..: ..  .. :: ..:: 
CCDS13 ELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
          130       140       150       160       170  

>>CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18            (171 aa)
 initn: 485 init1: 359 opt: 492  Z-score: 541.9  bits: 107.1 E(32554): 7.3e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (30-226:9-170)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                    ...:: .  :.::::.::::::::::::   
CCDS11                      MSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
                                    10         20        30        

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      ::...:::::::::::::.: .:.::. :
CCDS11 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
                                         40        50        60    

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
         .: :.::..:::::::::.:::::::::.:::::..: .::  :: :. : .. : ..
CCDS11 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
            70        80        90       100       110       120   

              190       200       210       220        
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD 
       : : :..:::..::: ...   : :  ::..: ..  .. :: ..:: 
CCDS11 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
           130       140       150       160       170 

>>CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18            (177 aa)
 initn: 485 init1: 359 opt: 492  Z-score: 541.7  bits: 107.1 E(32554): 7.5e-24
Smith-Waterman score: 532; 46.5% identity (67.7% similar) in 198 aa overlap (30-226:15-176)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                    ...:: .  :.::::.::::::::::::   
CCDS77                MDLTTTMSSKRTKTKTKKRPQ-RATSNVFAMFDQSQIQEFKE---
                              10        20         30        40    

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      ::...:::::::::::::.: .:.::. :
CCDS77 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
                                             50        60          

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
         .: :.::..:::::::::.:::::::::.:::::..: .::  :: :. : .. : ..
CCDS77 PTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
      70        80        90       100       110       120         

              190       200       210       220        
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD 
       : : :..:::..::: ...   : :  ::..: ..  .. :: ..:: 
CCDS77 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
     130       140       150       160       170       

>>CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18           (172 aa)
 initn: 476 init1: 350 opt: 485  Z-score: 534.3  bits: 105.7 E(32554): 1.9e-23
Smith-Waterman score: 528; 45.0% identity (65.8% similar) in 202 aa overlap (26-226:5-171)

               10        20        30        40        50        60
pF1KE0 MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLA
                                .:  .. :.    :.::::.::::::::::::   
CCDS11                      MSSKKAKTKTTKKRPQRATSNVFAMFDQSQIQEFKE---
                                    10        20        30         

               70        80        90       100       110       120
pF1KE0 LSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRIN
                                      ::...:::::::::::::.: .:.::. :
CCDS11 -------------------------------AFNMIDQNRDGFIDKEDLHDMLASLGK-N
                                        40        50        60     

              130       140       150       160       170       180
pF1KE0 VKNEELEAMVKEAPGPINFTVFLTMFGEKLKGTDPEETILHAFKVFDTEGKGFVKADVIK
         .  :.::..:::::::::.:::::::::.:::::..: .::  :: :. : .. : ..
CCDS11 PTDAYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLR
           70        80        90       100       110       120    

              190       200       210       220        
pF1KE0 EKLMTQADRFSEEEVKQMFAAFPPDVCGNLDYRNLCYVITHG-EEKD 
       : : :..:::..::: ...   : :  ::..: ..  .. :: ..:: 
CCDS11 ELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD
          130       140       150       160       170  




226 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 21:18:55 2016 done: Thu Nov  3 21:18:56 2016
 Total Scan time:  1.870 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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