FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6419, 309 aa 1>>>pF1KB6419 309 - 309 aa - 309 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6412+/-0.000978; mu= 1.1753+/- 0.059 mean_var=205.4212+/-42.399, 0's: 0 Z-trim(111.2): 12 B-trim: 0 in 0/53 Lambda= 0.089485 statistics sampled from 12172 (12178) to 12172 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.374), width: 16 Scan time: 2.760 The best scores are: opt bits E(32554) CCDS9750.1 MNAT1 gene_id:4331|Hs108|chr14 ( 309) 2058 277.9 6.7e-75 CCDS53899.1 MNAT1 gene_id:4331|Hs108|chr14 ( 267) 1244 172.8 2.6e-43 >>CCDS9750.1 MNAT1 gene_id:4331|Hs108|chr14 (309 aa) initn: 2058 init1: 2058 opt: 2058 Z-score: 1458.2 bits: 277.9 E(32554): 6.7e-75 Smith-Waterman score: 2058; 100.0% identity (100.0% similar) in 309 aa overlap (1-309:1-309) 10 20 30 40 50 60 pF1KB6 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPIHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPIHK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 LEEALYEYQPLQIETYGPHVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS97 LEEALYEYQPLQIETYGPHVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA 250 260 270 280 290 300 pF1KB6 FSGLFWQPS ::::::::: CCDS97 FSGLFWQPS >>CCDS53899.1 MNAT1 gene_id:4331|Hs108|chr14 (267 aa) initn: 1241 init1: 1241 opt: 1244 Z-score: 891.1 bits: 172.8 E(32554): 2.6e-43 Smith-Waterman score: 1697; 86.4% identity (86.4% similar) in 309 aa overlap (1-309:1-267) 10 20 30 40 50 60 pF1KB6 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFRV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 QLFEDPTVDKEVEIRKKVLKIYNKREEDFPSLREYNDFLEEVEEIVFNLTNNVDLDNTKK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 KMEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENEQRRLFIQKEEQLQQILKRKNK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 QAFLDELESSDLPVALLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPIHK ::::::: ::::::::::: CCDS53 QAFLDEL------------------------------------------GQHISLAPIHK 190 250 260 270 280 290 300 pF1KB6 LEEALYEYQPLQIETYGPHVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 LEEALYEYQPLQIETYGPHVPELEMLGRLGYLNHVRAASPQDLAGGYTSSLACHRALQDA 200 210 220 230 240 250 pF1KB6 FSGLFWQPS ::::::::: CCDS53 FSGLFWQPS 260 309 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 20:52:56 2016 done: Fri Nov 4 20:52:57 2016 Total Scan time: 2.760 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]