Result of GENSCAN for pF1KB6517
GENSCAN 1.0	Date run:  4-Nov-116	Time: 23:13:12

Sequence gi568815588f:88889469_89114447 : 224979 bp : 38.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8896   8998  103  1  1   31   93   115 0.670   5.56
 1.02 Intr +  15975  16192  218  2  2   74  111   172 0.431  14.48
 1.03 Intr +  19234  19309   76  1  1   93   67    70 0.997   4.00
 1.04 Intr +  21448  21543   96  0  0   25  106    81 0.880   2.89
 1.05 Intr +  23633  23990  358  1  1   65   89   384 0.999  30.10
 1.06 Intr +  25066  25190  125  2  2  104   64    59 0.884   4.48
 1.07 Intr +  27212  27349  138  1  0   91   65   113 0.994   9.04
 1.08 Term +  43363  43743  381  0  0   51   51   191 0.027   5.55
 1.09 PlyA +  44779  44784    6                               1.05

 2.10 PlyA -  45632  45627    6                               1.05
 2.09 Term -  45898  45755  144  1  0   83   41   134 0.932   5.13
 2.08 Intr -  48774  48593  182  1  2  100   79   220 0.647  20.97
 2.07 Intr -  50230  50039  192  2  0   58   74   293 0.921  23.44
 2.06 Intr -  51922  51761  162  2  0   91   81   224 0.992  21.03
 2.05 Intr -  52401  52317   85  0  1  106   82    63 0.943   5.97
 2.04 Intr -  54439  54329  111  1  0   57  108   115 0.991  10.06
 2.03 Intr -  57918  57790  129  0  0   76   86   143 0.973  12.87
 2.02 Intr -  59485  59334  152  2  2   87   94   151 0.428  14.56
 2.01 Init -  66115  65980  136  1  1   42   81    89 0.040   3.95
 2.00 Prom -  91973  91934   40                              -3.95

 3.00 Prom +  95562  95601   40                              -2.55
 3.01 Init + 110354 110396   43  1  1   52  115     7 0.700   0.43
 3.02 Intr + 113357 113487  131  0  2   58   55   137 0.764   6.89
 3.03 Intr + 113561 113726  166  1  1  108   91   127 0.999  13.61
 3.04 Intr + 118232 118369  138  0  0  113   95   132 0.999  15.91
 3.05 Intr + 119421 119529  109  1  1   63  108    37 0.914   1.62
 3.06 Intr + 121071 121132   62  0  2  106   86    85 0.943   7.56
 3.07 Intr + 122531 122629   99  0  0  100   37    61 0.466   1.36
 3.08 Term + 124651 124982  332  2  2   89   40   352 0.993  24.33
 3.09 PlyA + 125798 125803    6                              -0.45

 4.02 PlyA - 126598 126593    6                               1.05
 4.01 Sngl - 129482 129069  414  2  0   76   37   265 0.349  14.28
 4.00 Prom - 139468 139429   40                              -4.55

 5.03 PlyA - 141167 141162    6                               1.05
 5.02 Term - 142575 142446  130  2  1   77   55   128 0.593   5.07
 5.01 Init - 171211 171150   62  1  2   73   59    76 0.327   3.97
 5.00 Prom - 185258 185219   40                              -3.45

 6.02 PlyA - 185667 185662    6                               1.05
 6.01 Term - 220142 220078   65  0  2  121   43    91 0.726   4.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_1|498_aa
XLPDRIVGNLDHILRATELENIPVYVDLAIVYNATKKLAAMPDHTDVSLSPEERVRALSK
LGCNITISEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDY
QQCAVPEKQDIMKKLKEIAFPRTDELKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQR
LIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFS
THQNNSLLNVFADQPNKSDATNYASHSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDL
CHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQ
DQHDLLTLGWIHELMPPGGKYEVQQCNRPVLLQGNPVEMTAMVGDFCLNYESDLVASICT
LILKFKSSGYEVPLHGKHEFAAGRFPSIIFQWFLNFDVHKNHQGNLIEVQVSSFSSRDSS
SAGVRCDPGLYPFKMSFR

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_1|1497_bp
nnactccctgacaggatcgtggggaacctggaccacattttgagagccactgaactagaa
aacatacctgtttatgttgatcttgcaattgtttataatgcaactaaaaagttagctgct
atgcctgaccatacagatgtttccctaagcccagaagagcgagtccgtgccctaagcaag
cttggttgtaatatcaccatcagtgaagacatcactccacgacgttactttaggtctgga
gtagagatggagaggatggcgtctgtgtatttggaagaaggaaatttggaaaatgccttt
gttctttataataaatttataaccttatttgtagaaaagcttcctaaccatcgagattac
cagcaatgtgcagtacctgaaaagcaggatattatgaagaaactgaaggagattgcattc
ccaaggacagatgaattgaaaaacgaccttttaaagaaatataacgtagaataccaagaa
tatttgcaaagcaaaaacaaatataaagctgaaattctcaaaaaattggagcatcagaga
ttgatagaggcagaaaggaagcggattgctcagatgcgccagcagcagctagaatcggag
cagtttctgtttttcgaagatcaactcaagaagcaagagttagcccgaggtcaaatgcga
agtcagcaaacctcagggctgtcagagcagattgatgggagcgctttgtcctgcttttcc
acacaccagaacaattccttgctgaatgtatttgcagatcaacctaataaaagtgatgca
accaattatgctagccactctcctcctgtaaacagggccttaacgccagctgctactcta
agtgctgttcagaatttagtggttgaaggactgcgatgtgtagttttgccagaagatctt
tgccacaaatttctgcaactggcagaatctaatacagtgagaggaatagaaacctgtgga
atactctgtggaaaactgacacataatgaatttactattacccatgtaattgtgccaaag
cagtctgcgggaccagactattgtgacatggagaatgtagaggaattattcaatgttcag
gatcaacatgatctcctcactctaggatggatccatgagctcatgccgcctggtggtaaa
tatgaagtacagcagtgcaacagaccagttttactccaaggaaaccctgtagagatgaca
gcaatggttggtgatttctgcctcaattatgaaagtgatctggtggcaagtatctgcaca
ctaatccttaagtttaaatctagtggctatgaggtgcccctgcatggcaagcatgaattt
gcagctggaagatttccctcgatcatattccagtggttcttaaattttgatgtacataag
aatcaccagggaaatctgattgaagttcaggtttccagcttcagctccagagattctagc
tcagcgggtgttagatgtgacccagggctctacccatttaaaatgagcttccgatga

>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_2|430_aa
MRNRAEPGKSLQMWQDGHCASVDSMPLSSWAILGELFVTLLGNSKESCEAAPAMCEEEDS
TALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
TLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFE
TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL
TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDG
QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTM
YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEA
GPSIVHRKCF

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_2|1293_bp
atgaggaacagagcagagcctggcaaatccctgcagatgtggcaggatggccattgtgcc
agcgtagactccatgcctttgtcttcatgggctatcttaggagaactgtttgtgactctc
ctggggaattccaaagaatcctgtgaagcagctccagctatgtgtgaagaagaggacagc
actgccttggtgtgtgacaatggctctgggctctgtaaggccggctttgctggggacgat
gctcccagggctgttttcccatccattgtgggacgtcccagacatcagggggtgatggtg
ggaatgggacaaaaagacagctacgtgggtgacgaagcacagagcaaaagaggaatcctg
accctgaagtacccgatagaacatggcatcatcaccaactgggacgacatggaaaagatc
tggcaccactctttctacaatgagcttcgtgttgcccctgaagagcatcccaccctgctc
acggaggcacccctgaaccccaaggccaaccgggagaaaatgactcaaattatgtttgag
actttcaatgtcccagccatgtatgtggctatccaggcggtgctgtctctctatgcctct
ggacgcacaactggcatcgtgctggactctggagatggtgtcacccacaatgtccccatc
tatgagggctatgccttgccccatgccatcatgcgtctggatctggctggccgagatctc
actgactacctcatgaagatcctgactgagcgtggctattccttcgttactactgctgag
cgtgagattgtccgggacatcaaggagaaactgtgttatgtagctctggactttgaaaat
gagatggccactgccgcatcctcatcctcccttgagaagagttacgagttgcctgatggg
caagtgatcaccatcggaaatgaacgtttccgctgcccagagaccctgttccagccatcc
ttcatcgggatggagtctgctggcatccatgaaaccacctacaacagcatcatgaagtgt
gatattgacatcaggaaggacctctatgctaacaatgtcctatcagggggcaccactatg
taccctggcattgccgaccgaatgcagaaggagatcacggccctagcacccagcaccatg
aagatcaagatcattgcccctccggagcgcaaatactctgtctggatcggtggctccatc
ctggcctctctgtccaccttccagcagatgtggatcagcaaacaggaatacgatgaagcc
gggccttccattgtccaccgcaaatgcttctaa

>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_3|359_aa
MGIYQGVVNKVHFHVWFEEPEIQTAIQVTCCFLGERNLKDSGALTLSLPVHSRYCQFWVL
TSVARLSSKSVNAQVTDINSKGLELRKTVTTVETQNLEGLHHDGQFCHKPCPPGERKARD
CTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKCRCKPN
FFCNSTVCEHCDPCTKCEHGIIKECTLTSNTKCKEEVKRKEVQKTCRKHRKENQGSHESP
TLNPVGIEIDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQ
LLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_3|1080_bp
atgggaatctatcagggtgtggttaataaagtacatttccatgtgtggtttgaagaacct
gagatccaaactgctatacaagtgacctgctgctttcttggagagagaaatctgaaagac
agtggagccctcacattgtctttgcctgtgcacagcagatactgccaattttgggttctt
acgtctgttgctagattatcgtccaaaagtgttaatgcccaagtgactgacatcaactcc
aagggattggaattgaggaagactgttactacagttgagactcagaacttggaaggcctg
catcatgatggccaattctgccataagccctgtcctccaggtgaaaggaaagctagggac
tgcacagtcaatggggatgaaccagactgcgtgccctgccaagaagggaaggagtacaca
gacaaagcccatttttcttccaaatgcagaagatgtagattgtgtgatgaaggacatggc
ttagaagtggaaataaactgcacccggacccagaataccaagtgcagatgtaaaccaaac
tttttttgtaactctactgtatgtgaacactgtgacccttgcaccaaatgtgaacatgga
atcatcaaggaatgcacactcaccagcaacaccaagtgcaaagaggaagtgaagagaaag
gaagtacagaaaacatgcagaaagcacagaaaggaaaaccaaggttctcatgaatctcca
actttaaatcctgtaggtattgaaatagatgttgacttgagtaaatatatcaccactatt
gctggagtcatgacactaagtcaagttaaaggctttgttcgaaagaatggtgtcaatgaa
gccaaaatagatgagatcaagaatgacaatgtccaagacacagcagaacagaaagttcaa
ctgcttcgtaattggcatcaacttcatggaaagaaagaagcgtatgacacattgattaaa
gatctcaaaaaagccaatctttgtactcttgcagagaaaattcagactatcatcctcaag
gacattactagtgactcagaaaattcaaacttcagaaatgaaatccaaagcttggtctag

>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_4|137_aa
MGGNRGCTWCLWASMSSRWAWAQQTLHWERPASPAGPGAVRGLAPGPAAAVLDFSPGLSC
LPMGQGSGPAAHHAQASPTITAPCSKAPSRIDHPRAEECGSMARDWQAAPPAAPVQDPRG
EASWASESGRDLGNLYV

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_4|414_bp
atgggcgggaaccggggctgcacatggtgcttgtgggccagcatgagttccaggtgggcg
tgggctcagcagaccctgcactgggagcggccagccagccccgccggccctggggcagtg
aggggcttagcacctgggccagcagctgctgtgcttgacttctcaccaggccttagctgc
ctccccatggggcagggctcgggacctgcagcccaccatgcccaagcctccccaacgatc
accgccccctgctctaaggctcccagtcgcattgaccatccaagggctgaggagtgcggg
agcatggcgcgggactggcaggcagctccacctgcagccccggtgcaggatccacggggt
gaagccagctgggcttctgagtctggtagggacttagggaacctttatgtctag

>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_5|63_aa
MEEGKGEAGPSYTARAGSRERGAHSLKARPSALSCGTTSPKALSYPEANPFEPLVQAKHN
IRP

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_5|192_bp
atggaggaaggcaaaggggaagcaggcccttcttacacagccagagcaggatcaagagag
aggggtgcccattccctgaaggctagaccttcagctctttcctgtggcacaacctccccc
aaggctttatcctatcctgaggccaatccattcgagcctctggtgcaagcaaaacacaat
attcgtccttga

>gi568815588f:88889469_89114447|GENSCAN_predicted_peptide_6|21_aa
XLLNNNKEDEDLYDDPFPLNE

>gi568815588f:88889469_89114447|GENSCAN_predicted_CDS_6|66_bp
ncgctactcaacaataacaaggaggatgaagacctttatgatgatccatttccacttaat
gaatag
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