Result of FASTA (ccds) for pF1KE0524
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0524, 239 aa
  1>>>pF1KE0524 239 - 239 aa - 239 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1397+/-0.000799; mu= 15.8978+/- 0.048
 mean_var=77.2567+/-15.998, 0's: 0 Z-trim(108.9): 18  B-trim: 82 in 1/49
 Lambda= 0.145917
 statistics sampled from 10522 (10532) to 10522 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.691), E-opt: 0.2 (0.324), width:  16
 Scan time:  2.230

The best scores are:                                      opt bits E(32554)
CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22        ( 239) 1609 347.7   4e-96
CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22        ( 235) 1402 304.1 5.1e-83
CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22        ( 205) 1386 300.7 4.8e-82
CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17        ( 239) 1158 252.8 1.5e-67
CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8          ( 251)  493 112.8 2.2e-25
CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8         ( 231)  415 96.3 1.8e-20
CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17        (  74)  280 67.5 2.7e-12


>>CCDS46672.1 DERL3 gene_id:91319|Hs108|chr22             (239 aa)
 initn: 1609 init1: 1609 opt: 1609  Z-score: 1839.3  bits: 347.7 E(32554): 4e-96
Smith-Waterman score: 1609; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS46 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
              190       200       210       220       230         

>>CCDS33615.1 DERL3 gene_id:91319|Hs108|chr22             (235 aa)
 initn: 1453 init1: 1389 opt: 1402  Z-score: 1603.9  bits: 304.1 E(32554): 5.1e-83
Smith-Waterman score: 1402; 92.6% identity (94.3% similar) in 229 aa overlap (1-229:1-228)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
       ::::::::::::::::::::::::: :  . ::: .   .   . : ::          
CCDS33 IYYFLEDVFPNQPGGKRLLQTPGFLKLLLD-APAEDPNYLPLPEEQPGPHLPPPQQ   
              190       200       210        220       230        

>>CCDS42986.1 DERL3 gene_id:91319|Hs108|chr22             (205 aa)
 initn: 1386 init1: 1386 opt: 1386  Z-score: 1586.5  bits: 300.7 E(32554): 4.8e-82
Smith-Waterman score: 1386; 100.0% identity (100.0% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
       :::::::::::::::::::::::::                                  
CCDS42 IYYFLEDVFPNQPGGKRLLQTPGFL                                  
              190       200                                       

>>CCDS11073.1 DERL2 gene_id:51009|Hs108|chr17             (239 aa)
 initn: 1158 init1: 1158 opt: 1158  Z-score: 1326.2  bits: 252.8 E(32554): 1.5e-67
Smith-Waterman score: 1158; 79.0% identity (95.1% similar) in 205 aa overlap (1-205:1-205)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
       ::.:.:  :.::.: :.::::.:::::::::::::..::::::::.:.:..::.:::.::
CCDS11 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
       ::::::.::.:.:::.:..:::::::::::::::::::::::::: ::::.::. :: ::
CCDS11 FLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGH
       :::.  :::::::::.: ::.::::::.::::::::.::::::::::::.::::::::::
CCDS11 GQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGH
              130       140       150       160       170       180

              190       200       210       220       230         
pF1KE0 IYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAAPS
       ::.:::::::::::: :.:.::..:                                  
CCDS11 IYFFLEDVFPNQPGGIRILKTPSILKAIFDTPDEDPNYNPLPEERPGGFAWGEGQRLGG
              190       200       210       220       230         

>>CCDS6337.1 DERL1 gene_id:79139|Hs108|chr8               (251 aa)
 initn: 479 init1: 365 opt: 493  Z-score: 569.3  bits: 112.8 E(32554): 2.2e-25
Smith-Waterman score: 495; 33.8% identity (64.6% similar) in 237 aa overlap (10-234:8-244)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
                : ..::.:: . :: : .  . .: :.::  :.. :.  . .::.:: .: 
CCDS63   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
                 10        20        30        40        50        

                  70        80        90       100       110       
pF1KE0 FLFF--GP-LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL
        ..:  ::  :: .. :. :...:   :: :.: :: ::..::.::. . ... ::  ..
CCDS63 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
       60        70        80        90       100       110        

       120       130       140       150       160       170       
pF1KE0 FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIA
        .:   :.  ..:::.. .  . :.:.    :.: .:::...::. ..:.:.. .:.:  
CCDS63 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGNL
      120       130       140       150       160       170        

       180       190       200                210       220        
pF1KE0 VGHIYYFLEDVFPNQPGGKRLLQTPGFL---------GLQSSKAPAGSSLTIWTQQSQGG
       :::.:.::   .: . ::. .:.:: ::         :...  .: .:      :.. ::
CCDS63 VGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGG
      180       190       200       210       220       230        

      230           
pF1KE0 PGTAGELAAPS  
         . :.       
CCDS63 RHNWGQGFRLGDQ
      240       250 

>>CCDS47915.1 DERL1 gene_id:79139|Hs108|chr8              (231 aa)
 initn: 395 init1: 281 opt: 415  Z-score: 481.0  bits: 96.3 E(32554): 1.8e-20
Smith-Waterman score: 415; 31.8% identity (61.8% similar) in 217 aa overlap (10-223:8-224)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
                : ..::.:: . :: : .  . .: :.::  :.. :.  . .::.:: .: 
CCDS47   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITA
                 10        20        30        40        50        

                  70        80        90       100       110       
pF1KE0 FLFF--GP-LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSL
        ..:  ::  :: .. :. :...:   :: :.: :: ::..::.::. . ... ::  ..
CCDS47 TFYFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDM
       60        70        80        90       100       110        

       120       130       140       150       160       170       
pF1KE0 FFLGQALMAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIA
        .:   :.  ..:::.. .  . :.:.    :.: .:::...::. ..:.:  .:: :  
CCDS47 QLLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSYPMDLGGRN
      120       130       140       150       160       170        

       180       190       200       210       220       230       
pF1KE0 VGHIYYFLEDVFPNQPGGKRLLQTPGFLGLQSSKAPAGSSLTIWTQQSQGGPGTAGELAA
             ::   .:.. ::   . .:     ...   .:..   : :              
CCDS47 FLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGGGRHNWGQGFRLGDQ       
      180       190       200       210       220       230        

         
pF1KE0 PS

>>CCDS76927.1 DERL2 gene_id:51009|Hs108|chr17             (74 aa)
 initn: 277 init1: 277 opt: 280  Z-score: 334.1  bits: 67.5 E(32554): 2.7e-12
Smith-Waterman score: 280; 62.3% identity (85.5% similar) in 69 aa overlap (1-69:1-68)

               10        20        30        40        50        60
pF1KE0 MAWQGLAAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTN
       ::.:.:  :.::.: :.::::.:::::::::::::..::::::::.:.:..::: .: : 
CCDS76 MAYQSLRLEYLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQVLQLDT-
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KE0 FLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFL
       ..:   . :                                                   
CCDS76 YIFSWKMYFPINLVE                                             
      60        70                                                 




239 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 01:56:09 2016 done: Thu Nov  3 01:56:10 2016
 Total Scan time:  2.230 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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