Result of GENSCAN for pF1KB6452
GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:55:51

Sequence gi568815582r:58064074_58297736 : 233663 bp : 44.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7579   7696  118  2  1  120   91     6 0.036   3.62
 1.02 Intr +  29712  29888  177  0  0  139   65     4 0.588   2.23
 1.03 Intr +  29953  30040   88  1  1  120   16    65 0.367   2.47
 1.04 Intr +  32675  32734   60  1  0   58   94    44 0.161   0.93
 1.05 Intr +  34464  34623  160  2  1   76   36    83 0.234   1.46
 1.06 Term +  34788  34966  179  1  2  103   41    86 0.281   3.25
 1.07 PlyA +  36829  36834    6                               1.05

 2.08 PlyA -  37393  37388    6                               1.05
 2.07 Term -  49957  49952    6  1  0  122   36     0 0.461  -3.93
 2.06 Intr -  50847  50737  111  0  0   28  121    85 0.934   6.38
 2.05 Intr -  51384  51196  189  0  0  114   84   310 0.999  32.98
 2.04 Intr -  52079  51968  112  1  1   78  111    88 0.998  10.48
 2.03 Intr -  52878  52799   80  0  2  103  100    96 0.999  10.65
 2.02 Intr -  56004  55951   54  0  0  115   64    17 0.613   1.18
 2.01 Init -  65042  64959   84  2  0   68   58   113 0.864   7.12
 2.00 Prom -  80294  80255   40                              -6.26

 3.13 PlyA -  91081  91076    6                               1.05
 3.12 Term -  94280  94100  181  1  1  147   42   143 0.937  12.68
 3.11 Intr -  96992  96821  172  0  1   93    9    57 0.254  -2.70
 3.10 Intr - 101635 101487  149  0  2   91   65   188 0.974  16.68
 3.09 Intr - 102611 102511  101  2  2   73   98   163 0.999  14.71
 3.08 Intr - 103235 103134  102  2  0   88   99    79 0.997   9.37
 3.07 Intr - 103722 103612  111  0  0   75   97    94 0.989   9.58
 3.06 Intr - 104620 104537   84  1  0   91   76    17 0.634   0.82
 3.05 Intr - 110437 110378   60  1  0   64  106    86 0.838   6.93
 3.04 Intr - 122783 122682  102  2  0   41   66   127 0.954   6.17
 3.03 Intr - 132771 132660  112  2  1   93  113   127 0.987  16.08
 3.02 Intr - 133765 133560  206  1  2   98   55   116 0.698   7.30
 3.01 Init - 136120 136043   78  1  0   74   82    36 0.370   2.66
 3.00 Prom - 146042 146003   40                              -2.86

 4.00 Prom + 146904 146943   40                              -5.56
 4.01 Init + 163717 163773   57  0  0   85  106    21 0.465   4.91
 4.02 Term + 171221 171349  129  1  0   64   41   124 0.175   3.48
 4.03 PlyA + 171518 171523    6                               1.05

 5.00 Prom + 181587 181626   40                              -3.86
 5.01 Init + 185942 186042  101  1  2   63   86   205 0.973  17.53
 5.02 Intr + 188654 188780  127  2  1   48   86    88 0.720   5.28
 5.03 Intr + 189925 190086  162  0  0   78   71    89 0.877   6.37
 5.04 Intr + 191004 191291  288  2  0   39    4   220 0.973   6.14
 5.05 Intr + 194295 194450  156  2  0   71  110   170 0.999  17.71
 5.06 Intr + 198312 198467  156  2  0   11   78   150 0.750   6.51
 5.07 Intr + 199432 199500   69  0  0   97   80    47 0.905   4.18
 5.08 Intr + 203406 203513  108  2  0   64   75    77 0.813   4.48
 5.09 Intr + 214409 214564  156  1  0   79   83   198 0.943  18.61
 5.10 Term + 215618 215704   87  1  0  122   42    40 0.811   0.46
 5.11 PlyA + 218377 218382    6                               1.05

 6.08 PlyA - 219464 219459    6                              -0.45
 6.07 Term - 219819 219796   24  0  0  107   43    -6 0.206  -4.98
 6.06 Intr - 220648 220517  132  1  0   48   91    90 0.690   6.14
 6.05 Intr - 222122 221954  169  1  1  100    2   167 0.400   9.25
 6.04 Intr - 226723 226644   80  1  2   18   75    25 0.546  -7.45
 6.03 Intr - 227063 226846  218  0  2   90   60   240 0.906  19.62
 6.02 Intr - 229345 229268   78  2  0  113   39    38 0.640   0.92
 6.01 Init - 229707 229659   49  0  1   76   81   100 0.925   7.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 178019 177890  130  2  1   85   92    78 0.886   8.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_1|260_aa
XHWPVAAASSSSPDTLWILVLLFLPLESPNTPHSQLTQLRLSSTRSLIPILRASPQVVPP
APQTTPHPPCSSPIAPSPIGVSSSPLHCSSQNPGFILSWSPLAAFFLPLLLAPIFPKNHL
LRADMGPWHLICQKGQYHLSSRCICEEQTLSHFCSRAPAALLFFISVFLFKFQREESNSR
GLALASPGDHHAIVFSQQPRAGASVFPPGEDFFISPLLAIKPFYAAETQLGAQEGGQPQG
PHEDPKTMTTTVTMTTLTVD

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_1|783_bp
ngccattggccagtggcagcagcctcctcatcctctccagacacactctggatcttggtt
ctgctcttcttgcctctggagagccccaacactccccattcccagttgactcagctcagg
ctctccagcactcgtagccttatacccatcctgcgggcatctccccaagttgttccacca
gctcctcagactaccccccacccaccctgctcctccccaattgctcccagccccattggt
gtctcctccagccccctccattgctcaagtcagaacccagggttcatcctgagctggtcc
ccgctggctgctttcttcctgcccctgctcctggctcccatcttccccaaaaatcacctc
ctaagggccgacatgggaccttggcacctcatctgtcaaaaaggacagtaccacctgtcc
agcaggtgcatctgtgaggaacagactctttctcacttctgctccagagcccccgcggct
ctcctcttcttcatctctgttttcctcttcaaattccagagagaggaatccaacagccgt
ggcctggcactggccagcccaggagatcatcatgcaatcgtcttcagccagcagcccagg
gcaggagcctcagtcttcccacctggtgaagatttcttcatttctcctctcctcgccata
aaacccttctatgcagctgagacacagttgggggcccaagaaggaggccaaccacaagga
ccacatgaggaccctaagacaatgacaactacagttaccatgacaacactcactgtggac
tga

>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_2|211_aa
MFKNTFQSGFLSILYSIGSKPLQIWDKKKIQEEYRHLGWEHEMASEVRNGHIKRITDNDI
QSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRR
FRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLLDFTRRAYGTNYIETLRVQIHANCRI
RRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_2|636_bp
atgttcaaaaacacgttccagagcggcttcctctccatcctctacagcatcggcagcaag
cctctgcaaatctgggacaaaaagaaaatacaggaggaatatcgccacttaggttgggaa
catgagatggcgagtgaggtacggaatggccacatcaaaagaatcactgataatgacatc
cagtccctggtgctagagattgaagggacaaatgtaagcaccacatatatcacatgccct
gcagaccccaagaagacgctgggaattaaacttcctttccttgtcatgattatcaaaaac
ctgaagaagtattttaccttcgaagtgcaggtactagatgacaagaatgtgcgtcgtcgc
tttcgggcaagtaactaccagagcaccacccgggtcaaacccttcatctgcaccatgccc
atgcggctggatgacggctggaaccagattcagttcaacttgctagacttcacacggcga
gcatacggcaccaattacatcgagaccctcagagtgcagatccatgcaaattgtcgcatc
cgacgggtttacttctcagacagactctactcagaagatgagctgccggcagagttcaaa
ctgtatctcccagttcagaacaaggcaaagcaataa

>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_3|485_aa
MGEVSLLSASHQRISWFPTDEKFGPWRPAARCLLRPTPRVPRRAAAATLCAPRRPPVPPA
MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINI
TNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKLIDTVKDPVQLYQILTDFDIRFY
MYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY
FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG
YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK
EAMEHPYFCRVGGWVGEAIECMTQTKLSWAFSPTREALMSFIEALKHQSLSQASSQTFCN
MSALTRSVAVLPLFHKQNKNQIKRLNAYREITFREQTQNGGRFGEHELDQAKGSPPPYIK
PHFRM

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_3|1458_bp
atgggggaggtgtcccttctcagtgcatcacatcagaggatcagttggttccctactgat
gagaagtttggaccatggcgcccggcggcccgctgcctcctccgcccgacgccccgcgtc
ccccgccgcgccgccgccgccaccctctgcgccccgcgccgccccccggtcccgcccgcc
atgcccggcccggccgcgggcagcagggcccgggtctacgccgaggtgaacagtctgagg
agccgcgagtactgggactacgaggctcacgtcccgagctggggtaatcaagatgattac
caactggttcgaaaacttggtcggggaaaatatagtgaagtatttgaggccattaatatc
accaacaatgagagagtggttgtaaaaatcctgaagccagtgaagaaaaagaagataaaa
cgagaggttaagattctggagaaccttcgtggtggaacaaatatcattaagctgattgac
actgtaaaggaccccgtgcaactctaccagatcctgacagactttgatatccggttttat
atgtatgaactacttaaagctctggattactgccacagcaagggaatcatgcacagggat
gtgaaacctcacaatgtcatgatagatcaccaacagaaaaagctgcgactgatagattgg
ggtctggcagaattctatcatcctgctcaggagtacaatgttcgtgtagcctcaaggtac
ttcaagggaccagagctcctcgtggactatcagatgtatgattatagcttggacatgtgg
agtttgggctgtatgttagcaagcatgatctttcgaagggaaccattcttccatggacag
gacaactatgaccagcttgttcgcattgccaaggttctgggtacagaagaactgtatggg
tatctgaagaagtatcacatagacctagatccacacttcaacgatatcctgggacaacat
tcacggaaacgctgggaaaactttatccatagtgagaacagacaccttgtcagccctgag
gccctagatcttctggacaaacttctgcgatacgaccatcaacagagactgactgccaaa
gaggccatggagcacccatacttctgcagggtaggtggctgggtaggagaagctattgag
tgtatgacgcagaccaagctttcctgggccttctcaccaactagagaagcgctgatgtcg
ttcattgaggcacttaaacaccagtcactcagccaggcctcctcccagacattctgtaac
atgtcagcactcacaaggtctgttgcggttctcccacttttccataagcagaacaagaac
caaatcaaacgtcttaacgcgtatagagagatcacgttccgtgagcagacacaaaacggt
ggcaggtttggcgagcacgaactagaccaagcgaagggcagcccaccaccgtatatcaaa
cctcacttccgaatgtaa

>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_4|61_aa
MADSRFGRGKYRCTSSLPKSGFVEKTEQCGISLDLNFGPTPNGYVTLDKLLNFSEPQSVY
E

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_4|186_bp
atggctgattccagatttggacgagggaaatacagatgtacatctagcttgccaaaaagt
ggatttgtggaaaagacagagcaatgtgggataagcctggatttgaatttcggccccacc
ccgaatggctacgtgaccttggacaagttgcttaacttctctgaacctcagtctgtgtat
gagtaa

>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_5|469_aa
MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQR
PPRLSEIKISAADYAQFRGRRRSKSRTGMDRGVGLTADQKLELVQKEVADMKDDLRHTRA
NAERDLQHHEAVKREKPVVAQSKSESFKTREANGAAFGPWPKALEPPGSCWYKSEGLKAK
NLESDVRGQEEQKQLSGMGRRGRARRLSTQASSTCFALAALAANWMAIIEEAEIRWSEVS
REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRKEEVSEALHDVDFQQLKIENAQ
FLETIEARNQELTQLKLSSGNTLQVLNAYKKSFADPSHSAQVAMVAVGLGSSQSKLHKAM
EIYLNLDKEILLRKELLEKIEKETLQVEEDRAKAEAVNKRLRKQLAEFRAPQVMTYVREK
ILNADLEKSIRMWERKVEIAEMSLKGHRKAWNRMKITNEQLQADYLAGK

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_5|1410_bp
atgactgatgatgagtccgagagcgtcctctccgactcccatgaagggtcggagctggag
ctgcctgttatccagctgtgcgggctggtggaggagctcagctatgtaaactctgctctc
aaaactgagactgagatgtttgagaaatattacgctaaactggagcccagggatcagcga
cctccacgattatcagaaattaaaatatcagcagcagattatgcacagtttcgaggcagg
cgtagatccaaatcccggacaggtatggaccgtggggtaggcctgactgccgaccaaaaa
cttgagctggtacaaaaagaggttgcggacatgaaggatgacttacgacacacaagggca
aatgcggaacgcgacctgcagcatcacgaggctgtgaaaagagagaagccggtagtggct
cagtccaagtctgaaagcttcaaaaccagggaagccaatggtgcagccttcggtccgtgg
ccgaaggccctagagcccccaggaagctgctggtacaagtccgagggtctaaaggcaaag
aacctggagtctgatgtccgagggcaggaggagcagaagcaattgtcgggcatgggaaga
agagggagagccagaagactcagtacacaagcttcttccacctgctttgctctagctgct
ctggcagccaattggatggcgatcattgaggaggctgaaattcgatggagtgaagtttcg
agagaagtgcatgagtttgaaaaagatattctaaaagccatatccaagaagaaagggagt
attttggccactcagaaagtgatgaaatacattgaggacatgaaccgccggaggaaggaa
gaggtgagtgaggcccttcacgatgttgattttcagcagttgaagatagagaacgctcaa
tttcttgagacaattgaagcaaggaatcaagaactgacccagctaaagctgtcatctgga
aacactctgcaggttctcaatgcctacaaaaaaagttttgccgacccctcgcatagtgct
caggtggcaatggtggctgtgggcttaggtagctcgcagagcaagcttcacaaggcaatg
gaaatatacctcaatctggacaaggagatcttgctgagaaaagagctacttgaaaaaatt
gaaaaagaaacactacaagtagaggaggaccgggccaaagccgaggcagtgaataagagg
ctccggaagcagctggccgagttccgggcaccacaggtgatgacttacgtccgggagaag
atcttaaatgcggacctggagaagagcatcaggatgtgggaaaggaaagtggagatagca
gagatgtccttaaaaggccatcgtaaggcttggaatcgaatgaaaataaccaatgagcag
ttgcaggcagattaccttgctgggaagtag

>gi568815582r:58064074_58297736|GENSCAN_predicted_peptide_6|249_aa
MRGVLLVLLGLLYSSTREYCSFANYNPQLQGWSREQGASTAAGCGVQKASVFYGPDPKEG
LVSSMEFPWVVSLQDSQYTHLAFGCILSEFWVLSIASAIQNRPVPLPLGPATSPGLPSLI
SAVRTAGLATEKCNDESSIQCRKDIVVIVGISNMDPSKIAHTEYPVNTIIIHEDFDNNSM
SNNIALLKTDTAMHFGNLTGNHMTMSVLRKIFVKDLDMCPLYKLQKTECGSHTKEETKTA
CLDPERQDF

>gi568815582r:58064074_58297736|GENSCAN_predicted_CDS_6|750_bp
atgcgaggggtgctcctggtgctgctcggccttctctattcttccaccagagaatactgc
tcttttgcaaactacaacccccaactgcagggctggtcccgggagcagggggcttctact
gctgcaggttgtggcgtccagaaagcttccgttttctacggtcctgaccccaaggagggc
ttggtcagcagcatggagttcccgtgggtggtgtcgctgcaggactcccagtacacacac
ctggctttcggctgcatcctgagcgagttctgggtcctcagcatcgcatccgccattcag
aacaggccagtgcccctgcctttggggcccgcaacatcgccggggttgccaagcctgatc
tctgctgtgaggactgcaggccttgcaacggaaaaatgcaatgatgagtcctccattcaa
tgcaggaaggacattgtcgttatagtgggtataagtaacatggatcctagcaagattgct
cacacagagtatccagtcaataccatcatcatccatgaggactttgataacaactccatg
agcaacaacatagccctcctgaagacagacacagcgatgcattttggcaacctgacagga
aatcacatgacgatgagtgtcctgaggaaaatcttcgtgaaagatcttgacatgtgtccc
ctatacaaactccagaagacagaatgcggcagccacacgaaagaggaaaccaagactgcc
tgcttggatccagaaaggcaggatttttag
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