Result of FASTA (omim) for pF1KB0998
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB0998, 230 aa
  1>>>pF1KB0998 230 - 230 aa - 230 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.4269+/-0.00029; mu= 19.8074+/- 0.018
 mean_var=61.7207+/-12.362, 0's: 0 Z-trim(117.2): 59  B-trim: 42 in 1/53
 Lambda= 0.163252
 statistics sampled from 28861 (28926) to 28861 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.339), width:  16
 Scan time:  6.850

The best scores are:                                      opt bits E(85289)
NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens]  ( 230) 1507 362.7  3e-100
NP_001164566 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 1507 362.7  3e-100
NP_001164563 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 1507 362.7  3e-100
NP_001139551 (OMIM: 605608,614035) claudin-14 [Hom ( 239)  741 182.3 6.3e-46
NP_652763 (OMIM: 605608,614035) claudin-14 [Homo s ( 239)  741 182.3 6.3e-46
NP_001139550 (OMIM: 605608,614035) claudin-14 [Hom ( 239)  741 182.3 6.3e-46
NP_001139549 (OMIM: 605608,614035) claudin-14 [Hom ( 239)  741 182.3 6.3e-46
NP_036262 (OMIM: 605608,614035) claudin-14 [Homo s ( 239)  741 182.3 6.3e-46
NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens]  ( 220)  591 146.9 2.5e-35
NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens]  ( 209)  578 143.8 2.1e-34
NP_067018 (OMIM: 615798) claudin-6 precursor [Homo ( 220)  576 143.4 2.9e-34
NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224)  576 143.4   3e-34
NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens]  ( 217)  571 142.2 6.6e-34
NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211)  565 140.8 1.7e-33
NP_001298 (OMIM: 609131) claudin-7 isoform 1 precu ( 211)  559 139.4 4.6e-33
NP_001171951 (OMIM: 609131) claudin-7 isoform 1 pr ( 211)  559 139.4 4.6e-33
NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211)  529 132.3 6.2e-31
NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] ( 224)  504 126.4 3.8e-29
NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens]  ( 225)  503 126.2 4.5e-29
XP_016884419 (OMIM: 602101) PREDICTED: claudin-5 i ( 303)  498 125.1 1.3e-28
XP_016884418 (OMIM: 602101) PREDICTED: claudin-5 i ( 303)  498 125.1 1.3e-28
NP_001124333 (OMIM: 602101) claudin-5 [Homo sapien ( 303)  498 125.1 1.3e-28
NP_003268 (OMIM: 602101) claudin-5 [Homo sapiens]  ( 303)  498 125.1 1.3e-28
NP_001172046 (OMIM: 248190,610036) claudin-19 isof ( 218)  447 113.0 4.1e-25
NP_001172009 (OMIM: 615778) claudin-15 [Homo sapie ( 228)  429 108.8   8e-24
NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] ( 228)  429 108.8   8e-24
NP_001171952 (OMIM: 609131) claudin-7 isoform 2 pr ( 145)  392 99.9 2.4e-21
NP_001002026 (OMIM: 609210) claudin-18 isoform 2 [ ( 261)  293 76.8 3.9e-14
NP_057453 (OMIM: 609210) claudin-18 isoform 1 prec ( 261)  287 75.4   1e-13
NP_005593 (OMIM: 601326) claudin-11 isoform 1 [Hom ( 207)  261 69.2 6.1e-12
NP_919260 (OMIM: 609203) claudin-23 [Homo sapiens] ( 292)  236 63.4 4.6e-10
NP_006571 (OMIM: 248250,603959) claudin-16 [Homo s ( 305)  210 57.3 3.3e-08
NP_005771 (OMIM: 606710) lipoma HMGIC fusion partn ( 200)  157 44.7 0.00014
XP_011533163 (OMIM: 606710) PREDICTED: lipoma HMGI ( 200)  157 44.7 0.00014
NP_036261 (OMIM: 611232) claudin-12 [Homo sapiens] ( 244)  143 41.5  0.0016
NP_001172002 (OMIM: 611232) claudin-12 [Homo sapie ( 244)  143 41.5  0.0016
NP_001172001 (OMIM: 611232) claudin-12 [Homo sapie ( 244)  143 41.5  0.0016


>>NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens]       (230 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1920.8  bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
              130       140       150       160       170       180

              190       200       210       220       230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
              190       200       210       220       230

>>NP_001164566 (OMIM: 300520) claudin-2 [Homo sapiens]    (230 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1920.8  bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
              130       140       150       160       170       180

              190       200       210       220       230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
              190       200       210       220       230

>>NP_001164563 (OMIM: 300520) claudin-2 [Homo sapiens]    (230 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1920.8  bits: 362.7 E(85289): 3e-100
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 230 aa overlap (1-230:1-230)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
              130       140       150       160       170       180

              190       200       210       220       230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
              190       200       210       220       230

>>NP_001139551 (OMIM: 605608,614035) claudin-14 [Homo sa  (239 aa)
 initn: 766 init1: 707 opt: 741  Z-score: 945.6  bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       : ::.:: .::.:: :.:::.:.:: :  .:..::  .:.::.::   . . ::   :. 
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
              130       140       150       160       170       180

              190       200       210          220       230       
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV       
       ::.::...      :  ::: : :: ..    :. ::: . ..  . :.:          
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
              190           200       210       220       230      

NP_001 DYV
          

>>NP_652763 (OMIM: 605608,614035) claudin-14 [Homo sapie  (239 aa)
 initn: 766 init1: 707 opt: 741  Z-score: 945.6  bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_652 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       : ::.:: .::.:: :.:::.:.:: :  .:..::  .:.::.::   . . ::   :. 
NP_652 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_652 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
              130       140       150       160       170       180

              190       200       210          220       230       
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV       
       ::.::...      :  ::: : :: ..    :. ::: . ..  . :.:          
NP_652 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
              190           200       210       220       230      

NP_652 DYV
          

>>NP_001139550 (OMIM: 605608,614035) claudin-14 [Homo sa  (239 aa)
 initn: 766 init1: 707 opt: 741  Z-score: 945.6  bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       : ::.:: .::.:: :.:::.:.:: :  .:..::  .:.::.::   . . ::   :. 
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
              130       140       150       160       170       180

              190       200       210          220       230       
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV       
       ::.::...      :  ::: : :: ..    :. ::: . ..  . :.:          
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
              190           200       210       220       230      

NP_001 DYV
          

>>NP_001139549 (OMIM: 605608,614035) claudin-14 [Homo sa  (239 aa)
 initn: 766 init1: 707 opt: 741  Z-score: 945.6  bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_001 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       : ::.:: .::.:: :.:::.:.:: :  .:..::  .:.::.::   . . ::   :. 
NP_001 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_001 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
              130       140       150       160       170       180

              190       200       210          220       230       
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV       
       ::.::...      :  ::: : :: ..    :. ::: . ..  . :.:          
NP_001 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
              190           200       210       220       230      

NP_001 DYV
          

>>NP_036262 (OMIM: 605608,614035) claudin-14 [Homo sapie  (239 aa)
 initn: 766 init1: 707 opt: 741  Z-score: 945.6  bits: 182.3 E(85289): 6.3e-46
Smith-Waterman score: 741; 47.8% identity (78.3% similar) in 230 aa overlap (1-227:1-226)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       ::: ..::.:..:..::..:::.. .:: :. ...::..:.:::.. :::::::. ::::
NP_036 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
       : ::.:: .::.:: :.:::.:.:: :  .:..::  .:.::.::   . . ::   :. 
NP_036 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAIL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       ::..:::.::: .. :.:. . ....::.::.:..::::::.:::::.::: .:::.: .
NP_036 GGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTL
              130       140       150       160       170       180

              190       200       210          220       230       
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPR--PG-QPPKVKSEFNSYSLTGYV       
       ::.::...      :  ::: : :: ..    :. ::: . ..  . :.:          
NP_036 LCLSCQDEAP----YRPYQAPPRATTTTANTAPAYQPPAAYKDNRAPSVTSATHSGYRLN
              190           200       210       220       230      

NP_036 DYV
          

>>NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens]       (220 aa)
 initn: 625 init1: 574 opt: 591  Z-score: 755.1  bits: 146.9 E(85289): 2.5e-35
Smith-Waterman score: 591; 39.0% identity (78.6% similar) in 210 aa overlap (3-212:2-207)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
         :.::...:  :..:: :::.:   :: :..:...:..:.:. .. .::::.:...:::
NP_001  MSMGLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTG
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
         :: .:..::.:: :.:::.:..:..  ..... ....:: .::   :.. :: .....
NP_001 QMQCKVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDTAKAKITIV
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       .::.:.:..:: ..::.:. . :.::::.:.::...: :.: .::.:  .. ..:..: .
NP_001 AGVLFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGAL
     120       130       140       150       160       170         

              190       200       210       220       230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
       :: ::  ....   : : ..   : ::.  ::                  
NP_001 LCCSCPPREKK---YTATKVVYSAPRSTG-PGASLGTGYDRKDYV     
     180       190          200        210       220     

>>NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens]       (209 aa)
 initn: 599 init1: 572 opt: 578  Z-score: 738.8  bits: 143.8 E(85289): 2.1e-34
Smith-Waterman score: 578; 39.4% identity (76.4% similar) in 208 aa overlap (1-208:1-203)

               10        20        30        40        50        60
pF1KB0 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG
       :::.:::..:  :..:: :....   :: :......:..:::.  . .::::.:...:::
NP_001 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB0 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKDRVAVA
         :: .:..::.:: :.:::.:... :  ...:. ..:::: .::   ..  :: .. ..
NP_001 QMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLEDESAKAKTMIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB0 GGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGII
       .:: :.:.::. ..::.:. :.:..:::.::: ...: :.: .::.:  .: . :..: .
NP_001 AGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGGL
              130       140       150       160       170       180

              190       200       210       220       230
pF1KB0 LCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVKSEFNSYSLTGYV
       :: .:  . ..      :.:.  :.::.                      
NP_001 LCCNCPPRTDKP-----YSAKYSAARSAAASNYV                
              190            200                         




230 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 20:25:52 2016 done: Fri Nov  4 20:25:53 2016
 Total Scan time:  6.850 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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